prot_H-elongata_contig54681.12860.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54681.12860.1
Unique Nameprot_H-elongata_contig54681.12860.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length219
Homology
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 2.500e-91
Identity = 141/221 (63.80%), Postives = 165/221 (74.66%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGG-KNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDINGASPEVVGS-VTEDVIPSESC 219
            M+I NCG EC+RMRYF+TYSQVYNN I NCG +DFV+   DGG KNGEG+YLGTSSNQWDDG NP+ EPDES +NH FKNHFDT+              GNEG+DIKEGS  NIVEDNYCTGQKDPNSACLD+RG SNIFR+NT E+N+GA IR GGH IDG+ YG +NE YENL+ NND  G+ + + PQGA+C NDI G+  +  GS   E + P  SC
Sbjct:  161 MDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVM---DGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQ--------------GNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLSPEGSC 364          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 3.290e-85
Identity = 136/220 (61.82%), Postives = 163/220 (74.09%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDINGASPEVVGS-VTEDVIPSESC 219
            M+I NCG EC+RMRYF+TYSQVYNN I NCG +D+V+  N   KNGEG+YLGTSSNQWDDG NP+ EPDES +NH FKNHFDT+              GNEG+DIKEG+  NIVEDNYCTGQKDPNSACLD+RG SNIFR+NT E+N+GA IR GGH IDG+ YG +NE YENL+ NN   G+ + + PQGA+C NDI G+  +  GS   E + P +SC
Sbjct:  465 MDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVM--NGSSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQ--------------GNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYDSRGSSYAEKLKPEDSC 668          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: UPI00036AEC55 (right-handed parallel beta-helix repeat-containing protein n=1 Tax=Hahella ganghwensis TaxID=286420 RepID=UPI00036AEC55)

HSP 1 Score: 204 bits (520), Expect = 2.630e-61
Identity = 107/220 (48.64%), Postives = 140/220 (63.64%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDIN-GASPEVVGSVTEDVIPSESC 219
            M+++N G EC+R+RY++T +++++N   NCGV DF    N+GGKNGE +Y+GTSSNQWDDG NPT  PD S  N I  N F T               GNE VDIKEG+  N+VE N C+GQ+DPNSA  DSRG  NIFRYN + +N GA +R GG+T+DG  YGV+N+ Y NL+ NN + GV LM  PQ  +C N  +     +++GS      P  SC
Sbjct:  164 MSLKNAGGECVRLRYYVTEAEIFDNTFYNCGVYDFKF--NNGGKNGEAIYVGTSSNQWDDGKNPTGGPDPSNHNWIHHNKFLTN--------------GNECVDIKEGAEYNLVEYNICSGQQDPNSAGFDSRGDHNIFRYNVSHDNKGAGVRLGGNTVDGRQYGVNNQVYGNLLYNNAQAGVKLMAAPQEKVCGNPTSDNTEGDIMGSSAMSYDPELSC 367          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A1F7IR59_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12 TaxID=1802061 RepID=A0A1F7IR59_9BACT)

HSP 1 Score: 191 bits (486), Expect = 4.100e-57
Identity = 106/220 (48.18%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDINGASP-EVVGSVTEDVIPSESC 219
            M I+N G EC+R+RY+   +++  N I +CG +D+    +DGGKNGEG+Y+GT+  Q DDG NPT++ DES  N I  N FDT+              GNE VDIKE S  NIVE+N CTGQKDP S  LDSRG  NIFRYN    N GA IR GG T+D     + NE YEN+++NN KGG+ +M  PQG +C N ++G      VG   ED  P++ C
Sbjct:   91 MTIKNAGGECVRLRYYAQNNEIAYNTITSCGRHDYKF--DDGGKNGEGVYIGTAPEQRDDGKNPTNDNDESNGNWIHHNFFDTQ--------------GNECVDIKENSKYNIVENNECTGQKDPESGGLDSRGGYNIFRYNNIYGNSGAGIRLGGDTVD---ENIMNEVYENIIVNNKKGGIKIMTAPQGKMCDNIMSGNDGGNAVGEYGEDYDPTKGC 291          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT)

HSP 1 Score: 194 bits (493), Expect = 1.510e-55
Identity = 99/220 (45.00%), Postives = 136/220 (61.82%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDING-ASPEVVGSVTEDVIPSESC 219
            M ++N G ECLR+RYF T S++  N I NCG  DF+   N GGKNGEG+Y+GTS+ QW DG NPT++PDE++ N +  N+ DT+              GNE +DIKEG++ NI+E N C GQKD  S   DSRG  NIFRYN    ++G  IR GG +++G  YG +N+ YEN +++N  GG+     PQG IC N ++G  + +  G    +  P +SC
Sbjct:    1 MTLKNSGGECLRLRYFATKSEIAYNTIANCGAYDFLF--NAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQ--------------GNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTMSGNTTGDSAGGFASEFDPIKSC 204          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: UPI001998BEE9 (Right-handed parallel beta-helix repeat-containing protein n=1 Tax=Roseiflexaceae bacterium TaxID=2762507 RepID=UPI001998BEE9)

HSP 1 Score: 189 bits (481), Expect = 1.730e-55
Identity = 105/220 (47.73%), Postives = 134/220 (60.91%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDIN-GASPEVVGSVTEDVIPSESC 219
            M  RN G ECLR+RYF+  S++  +   NCGV DF      GGKNGE +Y+GT+  Q  DG NPT++PD+S  N I  N+F+T+              GNE VDIKE ++NNIVE+N CTGQKDPNSA  DSRGS NIFRYNT+  N+GA +R GG T    T G+DN+ Y N++ +ND GG+     PQ  IC N IN     +  GS  +   P+  C
Sbjct:  146 MTFRNGGGECLRLRYFVQNSEIAQSTFLNCGVRDFRFKA--GGKNGEAIYIGTAPEQRGDGKNPTTDPDQSNNNWIHHNNFNTQ--------------GNECVDIKEAATNNIVENNTCTGQKDPNSAGFDSRGSGNIFRYNTSYGNVGAGVRLGGDTA---TDGIDNQVYANILHHNDAGGIKFQRAPQRTICGNTINDNRGGDATGSYPDRYNPTAPC 346          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931)

HSP 1 Score: 185 bits (469), Expect = 2.130e-52
Identity = 102/224 (45.54%), Postives = 130/224 (58.04%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPND----GGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDI-NGASPEVVGSVTEDVIPSESC 219
            M  +N G ECLR+RYF   +++  +   NCG +D+   P      GGKNGE +Y+GTS+NQW DG NPT+EPD+S  N +  N  +T+              GNE VDIKEG++ NIVE N CTGQKD NSA LDSRG  N FRYN    N+G  +R GG  +DG  YG +N  Y+N++ +N  GGV  MV PQG IC N + N    +  G       P  SC
Sbjct:  159 MTFKNAGGECLRLRYFAQNNEIAYSTFLNCGQDDY---PGGEWAGGGKNGEAIYIGTSNNQWGDGKNPTNEPDQSNNNWVHNNFMNTQ--------------GNECVDIKEGATGNIVEYNECTGQKDENSAGLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTMWNNTGGDSFGDFANQFDPKASC 365          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT)

HSP 1 Score: 182 bits (462), Expect = 2.320e-52
Identity = 107/220 (48.64%), Postives = 132/220 (60.00%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDING-ASPEVVGSVTEDVIPSESC 219
            MNI+N G EC+R+RYF   +++  N I  CG+ DF      GGKNGEG+Y+GT+  Q  DG NPTS+ DES  N I  N  +T+              GNE VDIKEGSS NIVE N CTGQKD  SA LDSRGS NIFRYN    N+GA +R GG   D    G++N+ YEN + NN  GG+     PQG IC N + G    + VGS  E+  P++SC
Sbjct:  191 MNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKG--GGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQ--------------GNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNIFRYNEVYGNLGAGVRLGG---DEDNDGINNDVYENTIKNNVSGGIKFQRAPQGKICGNKMEGNKGGDSVGSEAEEFNPTKSC 391          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A0G1AW46_9BACT (Secreted protein n=3 Tax=Candidatus Daviesbacteria TaxID=1752718 RepID=A0A0G1AW46_9BACT)

HSP 1 Score: 183 bits (465), Expect = 2.440e-52
Identity = 107/220 (48.64%), Postives = 130/220 (59.09%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDING-ASPEVVGSVTEDVIPSESC 219
            M ++N G EC+R RYF T ++V +N + NCGV DF    N GGKNGEG+Y+GT+  Q  DG NPTS+ D+S  N I  N F+T+              GNE VDIKE SS NI+E+N CTGQKDPNSA LD+RGS NIFR N    N GA IR GG   D  + G  N  Y N + NN  GG+     PQG IC N  +G +S   VGS   D  P+  C
Sbjct:  171 MTLKNAGGECMRFRYFATKNEVASNTVTNCGVYDFKF--NAGGKNGEGVYIGTAPEQLTDGKNPTSDRDQSNDNWIHNNTFNTQ--------------GNECVDIKEASSGNIIENNKCTGQKDPNSAGLDTRGSKNIFRSNETYGNTGAGIRLGG---DATSDGTGNHIYNNKISNNTAGGIKFQRSPQGEICGNSFSGNSSGNSVGSYGSDYNPTSVC 371          
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 181 bits (459), Expect = 4.520e-52
Identity = 97/221 (43.89%), Postives = 132/221 (59.73%), Query Frame = 0
Query:    1 MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDG-GKNGEGLYLGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGNEGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGAAIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDINGASP-EVVGSVTEDVIPSESC 219
            M IRN G EC+R+RY +T ++++ N   NCG  DF     DG GKNGE +Y+GTSS QWDDG NP+++PD S +N +  N+F T               GNE VDIKEG+++N+VE+N C GQ+DP S   D+RG  NI RYN + +N GA IR GG+ ++G  YGV NE Y N + +ND  G+ +M  PQ  +C N +   S   + G       P+  C
Sbjct:  170 MRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQF---DGRGKNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTR--------------GNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMTDNSKGNITGESATFYDPATGC 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54681.12860.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3L7_ECTSI2.500e-9163.80FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5JFC7_9PHAE3.290e-8561.82PPIase cyclophilin-type domain-containing protein ... [more]
UPI00036AEC552.630e-6148.64right-handed parallel beta-helix repeat-containing... [more]
A0A1F7IR59_9BACT4.100e-5748.18Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A1G2MDL9_9BACT1.510e-5545.00F5/8 type C domain-containing protein n=1 Tax=Cand... [more]
UPI001998BEE91.730e-5547.73Right-handed parallel beta-helix repeat-containing... [more]
UPI0019FF49312.130e-5245.54DUF1565 domain-containing protein n=1 Tax=Chlorofl... [more]
A0A1F7IHP9_9BACT2.320e-5248.64Uncharacterized protein n=1 Tax=Candidatus Roizman... [more]
A0A0G1AW46_9BACT2.440e-5248.64Secreted protein n=3 Tax=Candidatus Daviesbacteria... [more]
A0A261GHV7_9GAMM4.520e-5243.89DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 20..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54681contigH-elongata_contig54681:1642..3665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54681.12860.1mRNA_H-elongata_contig54681.12860.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54681 1642..3665 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54681.12860.1 ID=prot_H-elongata_contig54681.12860.1|Name=mRNA_H-elongata_contig54681.12860.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=219bp
MNIRNCGDECLRMRYFITYSQVYNNIIENCGVNDFVLHPNDGGKNGEGLY
LGTSSNQWDDGNNPTSEPDESRFNHIFKNHFDTEARIAQSSSGFWFLIGN
EGVDIKEGSSNNIVEDNYCTGQKDPNSACLDSRGSSNIFRYNTAENNIGA
AIRFGGHTIDGYTYGVDNEAYENLMINNDKGGVSLMVGPQGAICQNDING
ASPEVVGSVTEDVIPSESC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence