mRNA_H-elongata_contig5466.12856.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: D7G2R7_ECTSI (Protein RFT1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R7_ECTSI) HSP 1 Score: 669 bits (1725), Expect = 1.770e-230 Identity = 433/776 (55.80%), Postives = 488/776 (62.89%), Query Frame = 1
Query: 1 QRASTFVLNVLLQRAMISGVDSSSSEPTDRATSALEEYGAAAITLELISSTALFLAREPFRVALARSRVPLE------ASGS-GSTDGAVKAEERK---------EAYRRRFVNTAWLSAPIGVVFAAFVRLVCPWILRNDAFHGVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRARLGVISFGYAQILHSATLAAAYLIFAANS------------------TQSSMENEPPQKAA----DGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDR----NKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPA-----------------------DRRSSSSGHDQI-------------MRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQ-ANPVVSKRDDHGIGSVRSLTEAS-------------------PTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSASASWDISA-------ASRHVLVGVVCLGFSCLLFARFEQKFLRELRDLWAARRARPPAANRDPGPGT----DGRPKID 2001
QRASTFVLNVLLQRAM+S S + +P + SALEEYGAAAITL+LISSTALFLAREPFRVALARS+VP+ A G+ G G ER+ EAYRRRFVNTAW+SAP+G+ FA VRL PW++RND F GV ENRQAA+LVCLAAA+EL CEPLALIFQ+RLLVDVRV+AEAAAVLVLGVSRYLLVTRA +GV+SFGYAQ+ HS TL Y++FA T + +PP A DGG D FA RGWLP RPI RDD + G V D G+LRL LAGQS+LKHVLTEGDKIVLARAT C ++GG+LYEQGVYAIASGYGSL ARLLFQPLEEAARLMFSKLG E + + A PA R+ G+ Q +R KMASLL TLLKLVL AGLVFVCFGFHYTETLLRLLL + G GG AVSEVARVLSWYCVYVLFLAANGMCEAFACAVA+G QL GMGAGLVASFA FW LVGPLT RFGT GLVMANAAGMACRVI SG FIRRFFL+ P +G + E+S P G+ + NLWREVVTGA+PHP V+ MA+SS AA+ATS +A A++HV VG+VC + +F + E FLREL LWAARR P A R G G DG K D
Sbjct: 7 QRASTFVLNVLLQRAMLSAAASDTRQPRN---SALEEYGAAAITLDLISSTALFLAREPFRVALARSKVPIADEKTWVAGGNKGVAPGQQLTGERERARXXXXXXEAYRRRFVNTAWISAPVGLAFAGLVRLAYPWVIRNDDFQGVEENRQAASLVCLAAAVELMCEPLALIFQYRLLVDVRVRAEAAAVLVLGVSRYLLVTRAGMGVLSFGYAQLFHSVTLFTWYVLFAVKDVARARAGAETTLPXXXXXTLVAATGQPPGTARPLAQDGG---DDEGFARVRGWLPSRPI--RDDDSDESGLV----DSGKLRLAWALAGQSLLKHVLTEGDKIVLARATSSEHGCHRHSGGGCSQGGTLYEQGVYAIASGYGSLAARLLFQPLEEAARLMFSKLGAE--AGESRQGAVPPAVTATSKALTMGATHSSLGRGGGQGRQDGGGGYGQEGDSTDGAANGKLRLRAKMASLLATLLKLVLMAGLVFVCFGFHYTETLLRLLLAGKGGGGGFS-----AVSEVARVLSWYCVYVLFLAANGMCEAFACAVAQGGQLTGMGAGLVASFAAFWVLVGPLTGRFGTRGLVMANAAGMACRVICSGLFIRRFFLRRTTPATPSLKPAAVGDRAASGESSRLSPSGSPHRSPSEPSRAPPNGGERRKKTATKRNLWREVVTGAVPHPGVVSIMALSSAAAYATSPAARHVAGGNGGAPLDAAKHVGVGLVCFLVTAAVFVKCEGAFLRELGALWAARRPPGPDAGRGAGSGDAAALDGADKSD 763
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: W7U1L1_9STRA (Protein RFT1 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1L1_9STRA) HSP 1 Score: 238 bits (606), Expect = 9.100e-66 Identity = 220/677 (32.50%), Postives = 309/677 (45.64%), Query Frame = 1
Query: 1 QRASTFVLNVLLQRAMISGVDSSSSEPTDRATSALEEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEERKEAYRRRFVNTAWLSAPIGVVFAAFVRLVCPWILRNDAFHGVPEN----RQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLL---VTRARLGVISFGYAQILHSATLAAAY---LIFAA--NSTQSSMENEPPQKAADGGKPLDCWE----FAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLG------VEEETASTFE----------VAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSAS--ASWDISAASRHVLVG-VVCLG-FSCLLFARFEQKFLRELRDL 1923
QR FVLN LL R + V +G A++ L+L+ +TALFL+RE FR+ L R+ + +S + R+FVN +W+ +G + + P N+ G +N RQ L CLAA+LE EP L+ Q LL +R +E A L+ + ++L V +++FG+AQ+ +S L Y LI+ + Q+ + + A D + LPR P S WV+ L L L GQS KH+LT+GDKIVL+ G S Y QG+YA+A YGSL ARLLFQPLEE+ RLMF++L V E+ A + VA R + G + + L+ L+K V+ GLVF CFGF+YT LLRLLL RR + G VLSWYC+YVLFLA NGM EAF AVA + +GA SFAVF L P R GT GLV+AN AGM R++ S F+R +F V +++ D G G V S ++ RE PHP VL + + A +A+ + + ++ +HV+ G +V G +L+ EQ F +L+ +
Sbjct: 4 QRGVNFVLNQLLLRHVDPAV-----------------FGLASVPLDLLLNTALFLSREGFRLTLGRTTLVGLSSDTCEF--------------RQFVNLSWVPVLLGPLVSLLSLAFLP-SNHNEDIGGKGQNADALRQTGLLFCLAASLESLSEPAYLVCQGCLLTTLRSASEGLATLIRSIITFVLLVWVLPPEKALLAFGFAQVGYSVVLILVYWGYLIYVSLKGGGQTGIPGASKEAAMDTTSTSQTTQTPLRLLALSHLLPRAPSSSS----------ALWVEPSHLALAFALTGQSFFKHLLTQGDKIVLSI--------------GSSHYSQGLYALAQNYGSLAARLLFQPLEESGRLMFARLAAGNGGVVGEDGAEAADDKKXXKTETSVATDHRRGRGAEPGESAASQAMLKVLVGALVKTVILVGLVFACFGFNYTRVLLRLLLPGRRWETGA----GVGAEGSGEVLSWYCLYVLFLAVNGMTEAFVYAVATQQDVVRLGALAAVSFAVFAGLTFPFIRWHGTVGLVLANCAGMLVRILFSIHFVRAYF--DGVVSTRKQDGGEGHVSSTMLST-----------------REKQPDMFPHPVVLASFVAAFAATYASDKTLVSVDEVEPVLKHVVFGGMVFTGVLGSILWT--EQDFFEDLKSI 599
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A835YPZ4_9STRA (Protein RFT1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPZ4_9STRA) HSP 1 Score: 226 bits (576), Expect = 7.790e-63 Identity = 180/462 (38.96%), Postives = 225/462 (48.70%), Query Frame = 1
Query: 388 VPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRARLGVISFGYAQILHSATLAAAYLIFAANST-QSSMENEPPQKAADGGKPLDCWEFAGWRG-------WLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEE--ETASTFEVAAKPADRRSS---------------------------------------------SSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVV 1608
+P + QAA LVCLAAALEL+CEP LIFQ RL++ VRV+AEAAAVL+LGV++YLLVTRA LGV++FGYAQ+LHS L AY QSS+ A G + G G WLP GA G+ Q+RL L GQS KH+LTEGDKIVLARA G + QGVYAIA YGSLVARL+FQP+EE+ARLMF++LG +++ + AD ++ S H + ++ LL+ LLK VL G VF GFH+T LL LL+ GG+ G ++ + EVA VLSWYC+YV LA NGMCEAF +AL G RRF + GM R+ S FI RFF P++
Sbjct: 2 LPISLQAAGLVCLAAALELACEPAVLIFQWRLMLGVRVRAEAAAVLILGVAKYLLVTRAGLGVVAFGYAQLLHSCALIVAYAAAVTREVRQSSVRVAAAAAALRGSEGASAKGDGGGAGPFGRAAFWLP-------------GGAWGQG-STQQVRLVALLGGQSAFKHLLTEGDKIVLARAHG---------------HRQGVYAIAHNYGSLVARLVFQPVEESARLMFARLGSSGGGNGSTSGDDGHAEADHKAQLAELLSVLLESVLVVGGVFAALGFHHSARCFFAPRAQIHDFSVCLGSTHTFGPQAQLGELLSVLLKSVLLVGGVFAALGFHHTRALLSLLMA-----GGRAGGDA-TLGEVADVLSWYCLYVPCLAVNGMCEAFV-----------------------YALAGAAQRRFRDPPSPPPSP-GMLFRIAYSARFIVRFFGSPRPLL 404
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A662YBG2_9STRA (Protein RFT1 homolog n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YBG2_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.310e-43 Identity = 188/612 (30.72%), Postives = 280/612 (45.75%), Query Frame = 1
Query: 103 LEEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEERKEAYRRRFVNTAWLSAPI-----GVVFAAFVRLVCPWILRNDA-FHGVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRARLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAV--FWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSASASWDISAASRHVL-VGVVCLGFSCLLFARF--EQKFL 1905
L GA + LEL ++ +FL R+ FR+A R L+A+ S S+ + ++ VN AWLS I G+V A + L P +DA G P + C AA +E EP+ ++ +LV +V A++AA LV +Y+ V L + ++G A++ ++ TL + + +F S+ E ADGG + G R LP +P DG W + L L QS +K++L EGDK VL TG SL G+Y + S GSLV R++F P+EEA + +FSKL ++ ++ D + S S + K +LL LLKL+ GL+FVCFG Y TL+ LL + G G L+ YC+Y+ FL NG+CEA AV QL + L FAV F ALV +GT+GL++AN M+CR++ F+ +F + +P SK G G ++ L WR+ + L + L +M V++ + S + +RHVL VGV + F+C+L A F E+K L
Sbjct: 45 LSVTGAVTVRLELALAS-IFLLRDGFRLAFLRMP-SLDATPSSSSSSSRL---------QQLVNVAWLSTAISWGVAGLVLA-YTALSGPSKSEDDAALAGYPT---VLAMYCGAAMIEALAEPMFVLAHASVLVSWQVAAQSAAFLVRAGVQYVGVVLLDLNLTAYGIAELAYALTLLSMFAVFFWRRIHSASE-------ADGG-----FALTGMRQLLPGKP---------EDGTP--WCHAELMTLLVPLTVQSGVKYLLAEGDKWVL---TGFA-----------SLQHMGIYGLVSNLGSLVPRIVFLPIEEATKTIFSKLATAQKQQNS--------DAKGSESKRTSMTEAK--TLLLVLLKLMNLVGLLFVCFGTSYARTLVLLLYGAEKAQQGVGG-----------ALAVYCIYIPFLGINGVCEAVVHAVGDDRQLMRLNKILGVFFAVYAFSALVFMQLLNWGTTGLILANCVNMSCRILYCLVFLASYFGREDPT-SKA---GSGVLKGLA------------------FWRQSLPDNLVVTSFLASMVVTATSQRLLLVEDSAKSTPWTRHVLHVGVGAVCFACVLLALFVKERKLL 561
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A8H7QCR3_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7QCR3_9FUNG) HSP 1 Score: 172 bits (436), Expect = 1.570e-42 Identity = 159/518 (30.69%), Postives = 236/518 (45.56%), Query Frame = 1
Query: 97 SALEEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEE----------RKEAYRRRFVNTAWLSAPIGVVFAAFVRLVCPWILRNDAFHGVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRA-------RLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPLTRRF---GTSGLVMANAAGMACRVIVSGAFIRRFFL 1590
S+ E G A++ LEL+ ST LFL+RE FR AL R G+ T +K+E+ E ++ N A++ IG+V + + ++ P R + L L+A EL EPL ++ + L +RV E VLV V + L R GV++F AQ +S + Y F N ++ N GK LPR+ + +D + W D L L+ TL QS+LKHVLTEGDK++++ A D+ +QGVYA+ YGSL+ R+LF PLEE R +FSKL D +S + ++++ A +L T+ K + GL+F+CF +YT TL+ LL+ G Q + VLS+YC YV + NG+ EAF AVA QL + ++ F++ + G L F G GL++AN + R+I S FIR++FL
Sbjct: 52 SSAETLGIASVKLELLLSTILFLSREGFRCALLRG-------GNSQTTQEIKSEKPVSKDAVLVSSAEGQVQKITNLAYVPMIIGLVTTLTACVYYLSSIDDETALKYPFYRTSIVLFGLSAYCELIIEPLYIMALNNLYFKLRVSVEGICVLVRCVLTFGLTVLGSNGSGTNRYGVLAFAVAQFAYSLVMVCGYAGFFINKVRNGQIN---------GKTT-----------LPRKLVAVNEDGTTRT----FWFDRELLDLSVTLTKQSLLKHVLTEGDKMLVS-------ALSSDK-------DQGVYALVVNYGSLIVRILFGPLEETVRTLFSKL-------------LSDIDDQSLTKSQNRVLETS-ARILITIFKFHILLGLIFICFATNYTATLIDLLV----GSAWSQN------TNAPLVLSFYCAYVPVMGINGVSEAFVQAVATEQQLARLSKFMIV-FSLIFVSSGVLFMHFMHLGAIGLILANIVNLGSRIIYSWIFIRKYFL 499
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A5D6Y2D6_9STRA (Protein RFT1 homolog n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2D6_9STRA) HSP 1 Score: 171 bits (434), Expect = 3.150e-42 Identity = 190/659 (28.83%), Postives = 279/659 (42.34%), Query Frame = 1
Query: 1 QRASTFVLNVLLQRAMISGVDSSSSEPTDRATSALEEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEERKEAYRRRFVNTAWLSAP----IGVVFAAFVRLVCPWILRND---AFHGVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRARLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPL---TRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSA-------SASWDISAASRHVLVGVVCL-GFSCLLFARFEQKFLRELRDL 1923
QRA TF LN L+ R + L GAAA+ LEL ++ +FL R+ FR+A R +A S S A ++ VN AWLS + + AAF + A G+ + + + C AAALE EP+ ++ +LV +V A++A + + +Y + LG++++G+A++ +++ L +FA + EPP G+P + LP P ++D G W L L QS +K++LTEGDK VL+ S GVY I GSLV R++F P+EEA + +FSK+ +S ++ A S HD L+ LLKL+ G VF CFG +Y TL+ LL + G V+ L+ YCVY+LFL NG+CEAF AV QL + L+A F V +A L + GT G+V+AN M CR++ +F+ F+ G + R L + WR+ +LPH AVL A VS A+S S SW A HV +G C G + L+A+ + L +L L
Sbjct: 17 QRAFTFALNALVLRKL-----------------QLSVTGAAAVRLELALAS-IFLLRDGFRLAFLRMPSLDQAPSSAS-----------RALVQQLVNVAWLSTAFSWLVALAIAAFSLRSAGGAAEPNTAAATDGLADYTRVLVMYCAAAALEALAEPMFVLAHCSVLVSWQVAAQSAGFVARALVQYACIFALDLGLLAYGFAELAYASAL---LCVFAGLFWRRIYAREPPP-----GQP--GFALTSMADLLPHAP-------RASDAHAGHWFHPQLCALLVPLGLQSGVKYLLTEGDKWVLSLFA--------------SFQNMGVYGIVFHLGSLVPRIVFLPIEEATKTIFSKMASHRAESSDSSSSSSQAP-----SAHDGF------HLVLVLLKLMHVVGFVFACFGVNYAHTLVLLLYGAEKARLG-----------VSDALAVYCVYILFLGLNGICEAFVHAVGSAAQLMRLNK-LMAGFFVLYAASAALFMSALQLGTPGIVLANCVNMGCRILYCLSFMAAHFVG-----------GKDAARGL-----------------IAFWRQ----SLPHRAVLLAFGVSFAVTSASSRLLLGGAHSESWPRHAL--HVAIGAACFAGVALALYAKERRLLLEQLAVL 558
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A197K7N8_9FUNG (Oligosaccharide translocation protein RFT1 n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197K7N8_9FUNG) HSP 1 Score: 171 bits (434), Expect = 1.340e-41 Identity = 185/664 (27.86%), Postives = 294/664 (44.28%), Query Frame = 1
Query: 106 EEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEER------KEAYR-RRFVNTAWLSAPIGVVFAAFVRLVCPWILR-NDAFHGV-PENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRAR------------------LGVISFGYAQILHSA-TLAAAYLIFAANSTQSSMENEPPQKAA----DG----GKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKL-----------GVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWA----LVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSASASWDISAASRHVLVGVVCLGFSCLLFARF--EQKFLRELRDLWAARR 1938
E G A++ LEL+ +T LFL+RE R A R G+T K E+ EAYR ++ VN + P+G + V ++L+ DA G+ P R + L ++A +EL EP+ ++ Q++L RV E AV+V V L +GV++F AQ ++ TL L F + ST+ + AA DG +P + LPRR + D S + D L+L+ TL QS+LKH+LTEGDK+++ + + QGVYA YGSL+AR+LFQP+EE +R +FS+L G ++ + P R + + D ++ + +LL T++K + GLVF+ FG HYT TL+ L++ G V++ +VLS YC YV + NG+ EA AVA +L + ++ AVF + L+G L + G+V+AN + R++ S F+ ++ + P+ K S T A +VP W+ ++ P P VL A + V T W+ ++ V +G+ F ++ F E++FLR+++ + RR
Sbjct: 82 ETLGIASVQLELLLNTILFLSREGVRCAAIRVSDDSTEGEEGTTSSDNKGMEKMRLTPGSEAYRLQKLVNMVYAPIPVGALMTCLA--VGYYLLQVTDASEGLFPGYRLSIYLYGISALVELLAEPMFMVAQYKLWFKTRVSVEGTAVIVRCVLTCALTVYGSRTAVTGSSSEGSNTNTNTMGVLAFAIAQFVYGLLTLGGFLLAFWSKSTERRDLDRKRMAAAIKKRDGIAVEDQPNSDDDTVSMSALLPRRLTRVGKDGQSES----FYFDKELLKLSKTLTSQSLLKHILTEGDKMMMTKFADVTA--------------QGVYAFVVNYGSLIARILFQPMEETSRTLFSRLLSDIAPGSTPSGNKDTNSEKTSNTTTPTSRTLTETQLDNLVLSR--NLLLTIMKFHILLGLVFIAFGTHYTATLIDLVV----------GRYWSTVTKAPQVLSLYCYYVPIMGLNGITEAVVQAVASEKELGVLSYWMIGFSAVFCSTGAFLMGTLNLK--AEGIVLANCVNLIMRIVWSMWFLSGYYGRYIPIAGK----------SSTTAKEGVLARFAYVP-----WQNII----PRPTVLVAFGAAFVLTATTEQWIGWE-GLYNKAVHLGIGVAAFVVVMGVIFVTEKQFLRDIQSIVRQRR 691
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: W2QTV9_PHYPN (Protein RFT1 homolog n=10 Tax=Phytophthora TaxID=4783 RepID=W2QTV9_PHYPN) HSP 1 Score: 169 bits (428), Expect = 1.890e-41 Identity = 170/601 (28.29%), Postives = 260/601 (43.26%), Query Frame = 1
Query: 103 LEEYGAAAITLELISSTALFLAREPFRVALARS-RVPLEASGSGSTDGAVKAEERKEAYRRRFVNTAWLSAPIGVVFAAFVRLVCPWILRNDAFHG---VPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRARLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMA----SLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAV--FWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHATSASASWDISAASRHVLVGVVCLGFSCL 1875
L GA + LEL ++ +FL R+ FR+A R + +A G+G +A+ ++ VN AWLS I AA V + ++ G + + C AA +E EP+ ++ +LV +V A++AA LV +Y+ V L + ++G A++ ++ TL + +F S E + + LP +P D W + L L+ QS +K++L EGDK VL TG SL GVY + S GSLV R++F P+EEA + +FSKL + A ++ S D+ ++K +LL LLKL+ GLVFVCFG Y TL+ LL + +QG V LS YCVY+ FL NG+ EA A+ ++L + L FA+ F ALV +GT GL++AN MACR++ F+ +F Q +P + G ++ WR + L A +M +++++ SAS + + HV VGVVC G + L
Sbjct: 38 LNVTGAVTVRLELALAS-IFLLRDGFRLAFLRMPSLDSKAPGNG------------KAHIQQLVNVAWLSTAISWAVAALVLVYSAVGSPSETLKGDEALDGYSAVLAMYCGAAMIEALAEPMFVLAHASVLVSWQVAAQSAAFLVRAAVQYVGVVVLELSLTAYGVAELSYALTLLIMFAVFFWRRVYGSSSGE------------EKFALTSMHQLLPGKPDGDAD-----------WCHNELMALLVPLSVQSGVKYLLAEGDKWVL---TGFA-----------SLQHMGVYGLVSNLGSLVPRIVFLPIEEATKTIFSKLAL--------------AQKQKSEDNDDKESKKKSLVDGQTLLLVLLKLMNLVGLVFVCFGTSYANTLVLLLYGAEKA---RQG--------VGAALSVYCVYIPFLGVNGVSEAVVHAIGDDHELMRLNKLLGVFFAIYAFSALVFMQVLDWGTLGLILANCVNMACRILYCLTFLASYFRQVSPKAHSSNSFLNG----------------------ISFWRRSLPDRLVMAAFFSSMVLTAISQRVLLGSASISLVRHALHVAVGVVCFGGTIL 541
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A8H7Q6A4_MORIS (Oligosaccharide translocation protein RFT1 n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q6A4_MORIS) HSP 1 Score: 169 bits (427), Expect = 2.510e-41 Identity = 166/526 (31.56%), Postives = 233/526 (44.30%), Query Frame = 1
Query: 106 EEYGAAAITLELISSTALFLAREPFRVALARSRVPLEASGSGSTDGAVKAEERK------------EAYRRRFVNTAWLSAPIGVVFAAFVRLVCPWILRNDAFHGVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLVTRA-------RLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSKLGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVARGNQLNGMGAGLVASFAVFWALVGPLTRRF---GTSGLVMANAAGMACRVIVSGAFIRRFFL-QANPVVSK 1614
E G A++ LEL+ ST LFL+RE FR AL R G GST K E E ++ N A+L IG+V + + + P R + + L+A EL EPL ++ + L +RV E AVL+ + L R GV++F AQ+ L Y+ F AN ++ G + R I R V+ G W D L L+ TL QSVLKHVLTEGDK++++ A DR +QGVYA+ YGSL+AR+LF PLEE +R +FSKL +V K + S + A +L T+ KL + GL+F+CF +YT TL+ LL+ G + VL++YCVYV + NG+ EAF AVA QL + ++ F+ + G L F G GLV+AN ++ R+I S FIR++F + P V K
Sbjct: 55 ETLGIASVKLELLLSTILFLSREGFRCALLR--------GGGSTATQPKKESSSRNQGNMVDVNSPEGEIQKVTNLAYLPTAIGLVTTLTACIYYLSTIDDVTASKYPFYRTSIVIYGLSAYCELLIEPLYILALNNLYFKLRVSVEGVAVLLRCFLTFGLTVLGANGSETNRYGVLAFAIAQLAFVLALVTGYVGFFANKVRN--------------------------GEIDGRCIIPRKLVDLKSGRT-YWFDKTLLDLSLTLTKQSVLKHVLTEGDKMLVS-------ALSSDR-------DQGVYALVVNYGSLIARILFGPLEETSRTLFSKL--------LSDVGDKELTKSQSHA------LETSARILNTIFKLQILLGLIFICFATNYTATLIDLLV----------GSAWSQQTNAPTVLAFYCVYVPVMGINGISEAFVQAVASEQQLARLSKFMLL-FSFVFVCSGVLFMHFMQLGAIGLVLANIVNLSSRIIYSWVFIRQYFTSKRGPAVGK 506
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Match: A0A7S4JG91_9STRA (Protein RFT1 homolog n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JG91_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.770e-41 Identity = 192/675 (28.44%), Postives = 286/675 (42.37%), Query Frame = 1
Query: 115 GAAAITLELISSTALFLAREPFRVALARSRVPLEA-----SGSGSTDGA----VKAEERKEAYRRRFVNTAWLSAPIGVVFAAFVRLV-CPWILR----------------NDAFH---GVPENRQAATLVCLAAALELSCEPLALIFQHRLLVDVRVKAEAAAVLVLGVSRYLLV---TRA---------------RLGVISFGYAQILHSATLAAAYLIFAANSTQSSMENEPPQKAADGGKPLDCWEFAGWRGWLPRRPIQSRDDVNSNDGAVGKWVDLGQLRLTGTLAGQSVLKHVLTEGDKIVLARATGIGQACDDDRNKGGSLYEQGVYAIASGYGSLVARLLFQPLEEAARLMFSK---------LGVEEETASTFEVAAKPADRRSSSSGHDQIMRRKMASLLTTLLKLVLSAGLVFVCFGFHYTETLLRLLLVTRRGDGGKQGDESFAVSEVARVLSWYCVYVLFLAANGMCEAFACAVA-RGNQLNGMGAGLVASFAVFWALVGPLTRRFGTSGLVMANAAGMACRVIVSGAFIRRFFLQANPVVSKRDDHGIGSVRSLTEASPTSGDEIVFVPPRVNLWREVVTGALPHPAVLGAMAVSSVAAHAT---------------SASASWDISAASRHVLVGVVCLGFSCLLFARFEQKFLRELRDL 1923
G A+I LEL+ ST LFL RE FR+AL +++ + + TDG V ++ + R N A+LS P G+ +A ++ W + N F+ + + R A + CLAA +E+ EPL + L VD R KAE +A + S L+ TR+ R V +FG +Q+++S TL +++F WE W + R P N + DL LRL QS+ KHVLTEGD+IVL +G Y+QGVYA+AS YG + +RLL QPLEE ARL+F++ GVE++ + K + ++++ H + +R + T +++ VL G F C ++T LLR+L R G + A LS +C Y LA NG EAF VA G ++ +G A +F AL L R+GT GLV AN MA R + S F R+F + K DH G + + R+ W +PHPA++ A+S A + S +W ++ A+RHV +G++ + L RFE+ F + LR +
Sbjct: 83 GRASIRLELLLSTGLFLGREGFRLALTKTKTKNDVRTDDKEAAVETDGPQGKRVVPIPQEVTAKERVNNVAFLSIPAGITASAIALILHLRWCNKTASNISSPAASSANDDNSDFYTEQSLRDFRFAGIMYCLAAVIEIMAEPLVINCMKALDVDSRAKAEGSAAVARAASLVFLLSGSTRSIASDLGFRWVGTALMRWPVSTFGVSQVIYSVTL--VFVMFKRK-----------------------WENIQWMKFN-RAP---------NSSFMSHNFDLRALRLVVIFTIQSLFKHVLTEGDRIVLTTLSGS--------------YDQGVYAMASSYGGIASRLLLQPLEENARLLFARQHALLYSMNTGVEQDHG----MKVKGSQNQAAALQHLEGLR----TTYTVIVRFVLYIGFTFACIASNFTSVLLRVLAGQRWGSN----------PDAAAALSSFCFYTALLALNGTTEAFVYGVASEGTEVGELGFVHAAVGGIFAALAPVLVSRWGTVGLVCANCTAMAMRSMYSIYFAARYFCRQYKRCGK--DH--------------YGSSLFGMMGRILQW------IMPHPAMIICYALSYYATRLSYMRLIGEEEYLELKEGISTNW-LAIAARHVGIGILSVAVLVALAFRFERNFGKSLRSM 667 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5466.12856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5466.12856.1 >prot_H-elongata_contig5466.12856.1 ID=prot_H-elongata_contig5466.12856.1|Name=mRNA_H-elongata_contig5466.12856.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=653bp MISGVDSSSSEPTDRATSALEEYGAAAITLELISSTALFLAREPFRVALAback to top mRNA from alignment at H-elongata_contig5466:683..3826+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5466.12856.1 ID=mRNA_H-elongata_contig5466.12856.1|Name=mRNA_H-elongata_contig5466.12856.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3144bp|location=Sequence derived from alignment at H-elongata_contig5466:683..3826+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5466:683..3826+ >mRNA_H-elongata_contig5466.12856.1 ID=mRNA_H-elongata_contig5466.12856.1|Name=mRNA_H-elongata_contig5466.12856.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3918bp|location=Sequence derived from alignment at H-elongata_contig5466:683..3826+ (Himanthalia elongata Himel1 dioecious)back to top |