prot_H-elongata_contig54656.12855.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54656.12855.1
Unique Nameprot_H-elongata_contig54656.12855.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length76
Homology
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.290e-17
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 IEIREDNEGAKAMAD-----GQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLPD 73
            I++ EDNEGA A+AD     G+ KHIDVR HF+R L   G +++ H++S+ QHAD+LTKALP  LF+ HR  ++ L +
Sbjct:  156 IKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLSE 233          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.680e-16
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0
Query:    1 IEIREDNEGAKAMAD-----GQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLPD 73
            I++ EDNEGA A+AD     G+ KHIDVR HF+R L   G +++ H++S+ QHAD+LTKALP  LF+ HR  ++ L +
Sbjct:  602 IKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLSE 679          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5L8G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 8.810e-16
Identity = 38/74 (51.35%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    5 EDNEGAKAMAD-----GQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLPD 73
            EDNEGA A+AD     G  KHIDVR HF+R L   G +++ H++S+ QHAD+LTKALP ALF+ +R  ++ L +
Sbjct:  148 EDNEGAIALADNPLSSGISKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRALFEVNRDIVLGLSE 221          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5JJ03_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ03_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.810e-14
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 IEIREDNEGAKAM-----ADGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLPD 73
            I++ EDN+GA A+     + G+ KHIDVR+HFIR L+ SG++ V+ +++  QHAD+LTKAL +A  + HR  ++NLP+
Sbjct:  802 IQVVEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLIRSGDISVKFVSTTEQHADLLTKALSSASLQYHRRKVINLPE 879          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5JIR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR0_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.760e-14
Identity = 38/78 (48.72%), Postives = 54/78 (69.23%), Query Frame = 0
Query:    1 IEIREDNEGAKAMAD-----GQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLPD 73
            I++ EDN+GA A+       G+ KHIDVR+HFIR+L+ SG++ V+ + +  QHAD+LTKAL  A  + HR  LMNL +
Sbjct:  307 IQVLEDNQGAIALVQNPLGSGRTKHIDVRFHFIRRLLRSGDISVKFVPTTEQHADLLTKALSRASLQYHRRKLMNLSE 384          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 4.580e-14
Identity = 37/76 (48.68%), Postives = 48/76 (63.16%), Query Frame = 0
Query:    1 IEIREDNEGAKAMADG-----QGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNL 71
            I++REDNEGA A+A+        KHIDVR H  R L   G + + H++SE QHAD+LTKALP   F+ HR   + L
Sbjct:  584 IQVREDNEGAIALAENPLSSCNSKHIDVRHHLFRNLTEEGVLEIRHVSSEGQHADILTKALPRGCFEVHRNFALGL 659          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5JKV2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKV2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.190e-13
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 IEIREDNEGAKAMA-----DGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNL 71
            I + ED+EGA  +A     +   KHIDVR HF+R+LV    V + H+AS++QHAD LTKALP   F  HR  +MNL
Sbjct:   55 IPLYEDHEGAIQIAIHPISNFNSKHIDVRHHFLRQLVDEKEVEIIHVASKYQHADFLTKALPEREFVSHRDYVMNL 130          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5KFD2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFD2_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.090e-13
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 IEIREDNEGAKAMA-----DGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNL 71
            I + EDNEGA  +A     +   KHIDVR HF+R+LV    V + H+AS++QHAD LTKALP   F  HR  +MNL
Sbjct:  381 IPLYEDNEGAIQIAKHPISNSNSKHIDVRHHFLRQLVDEKEVEIIHVASKYQHADFLTKALPEREFVSHRDYVMNL 456          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5KL18_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL18_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.190e-13
Identity = 39/76 (51.32%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    1 IEIREDNEGA-----KAMADGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNL 71
            I + EDNEGA       +++   KHIDVR HF+R+LV    V V H+AS++QHAD LTKALP   F  HR  +MNL
Sbjct:  636 IPLYEDNEGAIQIEKHPISNSNSKHIDVRHHFLRQLVDEKEVEVIHVASKYQHADFLTKALPEREFVSHRDDVMNL 711          
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Match: A0A6H5KXX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 2.540e-13
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    1 IEIREDNEGAKA-----MADGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHADVLTKALPAALFKRHRAALMNLP 72
            I++ EDN+GA A     ++  + KHID+R+HFIR+L  SG++  + + +  QHAD+LTKAL  A  + HR  LMNLP
Sbjct:  171 IQVLEDNQGAIAVVQNPLSSSRTKHIDLRFHFIRRLFRSGDISAKLVPTTGQHADLLTKALSRASLQYHRRKLMNLP 247          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54656.12855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW47_9PHAE2.290e-1750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPV1_9PHAE1.680e-1650.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L8G9_9PHAE8.810e-1651.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ03_9PHAE1.810e-1447.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JIR0_9PHAE3.760e-1448.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN43_9PHAE4.580e-1448.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKV2_9PHAE1.190e-1350.00Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFD2_9PHAE2.090e-1351.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KL18_9PHAE2.190e-1351.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KXX2_9PHAE2.540e-1346.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54656contigH-elongata_contig54656:3649..3876 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54656.12855.1mRNA_H-elongata_contig54656.12855.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54656 3649..3876 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54656.12855.1 ID=prot_H-elongata_contig54656.12855.1|Name=mRNA_H-elongata_contig54656.12855.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp
IEIREDNEGAKAMADGQGKHIDVRWHFIRKLVASGNVRVEHLASEWQHAD
VLTKALPAALFKRHRAALMNLPDDT*
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