mRNA_H-elongata_contig5465.12854.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: D8LC70_ECTSI (ROK family glucokinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC70_ECTSI) HSP 1 Score: 186 bits (473), Expect = 8.150e-54 Identity = 115/260 (44.23%), Postives = 145/260 (55.77%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMK---------------WNAE-----------------------KNMMDDNPSAVT------------------------------------------ITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKSEGLVEKVRQVAFSKRGWTLLPHECEIAIASTYERRLSGVMGAAGAA 540
LGTG+GLG+VC+G++V G RG++EGGHMIVEPG N R C CGQRGCLE + S +AVAAIASER+ N E + ++ + SAV+ ITA VF+ A +GDEVA+ VV+ETC Y+GLAC N+CR LDP AILLAGG+SK+EGL+EKVR+ +FS RGW +LPHECEI +A T +GV+GAAGAA
Sbjct: 144 LGTGIGLGVVCAGRVVTGCRGLVEGGHMIVEPGPNGRLCACGQRGCLEMYASASAVAAIASERLGSGGGDLFPAPSDTPYCNGETGEEPDAVAPTTPTHGSPGISRRRGSINRSDSAVSLRIMELERRTSAEQRASAPASXXXXXSAAGRRGSRLSGGGAKITAADVFSMAKKGDEVAVRVVEETCDYLGLACVNICRVLDPDAILLAGGMSKAEGLLEKVRK-SFSSRGWKVLPHECEIDLAKTCVD--AGVIGAAGAA 400
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A024FZ74_9STRA (Uncharacterized protein n=4 Tax=Albugo candida TaxID=65357 RepID=A0A024FZ74_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.150e-35 Identity = 74/180 (41.11%), Postives = 112/180 (62.22%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKSEGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAAGA 537
LGTG+G+G+V G+++ G+ G++EGGHMI+E ++ R C C QRGCLEA+ S TA+ + A ++K + D + TITAE +F A +GD + M++V+E Y+G AC NL R LDP IL +GGL+++ + + A K WT P+ I +ST Y+ +G++GAA A
Sbjct: 460 LGTGIGVGLVIDGQLIRGAHGLLEGGHMIIE--KDGRQCGCSQRGCLEAYASATALISCAKMKLKAGTPTKLSDAHDQ--TITAEMIFGLAVKGDRMCMDIVEEAADYLGFACVNLSRILDPELILFSGGLAEAGNFFVDLIRKAAVKYSWTKFPNRVSIKRSSTGYD---AGIIGAAAA 632
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: K3W791_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W791_GLOUD) HSP 1 Score: 130 bits (327), Expect = 1.360e-33 Identity = 80/178 (44.94%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIASTYERRLSGVMGAA 531
LGTGVG+GIV GK+V G MIEGGHMIVE RN R C C QRGCLEA+ S A+ A E + A+ + PS + I AE +F A +GD + ++ E Y+G AC N CR LDP I+L+GG++++ + + +VR A+ K WT P+ I AS SGV+GAA
Sbjct: 141 LGTGVGVGIVTDGKLVRGGFNMIEGGHMIVE--RNGRLCGCSQRGCLEAYSSAGALVLEAQEHVAAGADSTLAT-YPSEI-INAELIFQLAKEGDAMCTRLIAEAADYLGFACVNFCRMLDPEMIVLSGGMAEAGDVFISQVRD-AYLKYSWTAFPNPVRIEKASAGYH--SGVIGAA 311
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: F0W362_9STRA (Glucokinase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W362_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.550e-33 Identity = 72/181 (39.78%), Postives = 115/181 (63.54%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAAGA 537
LGTG+G+G+V G+++ G+RG++EGGHMI+E +N R CPC QRGCLEA+ S TA+ + A +++ + + + ITAE +F A +GD + + +V+E +G AC N R L P IL +GGL+++ E +E +R+ A+SK WT P+E + ++ Y+ +G++GAA A
Sbjct: 221 LGTGIGVGVVIDGRLIRGARGLLEGGHMIIE--KNGRPCPCSQRGCLEAYASATALISYAKMKLEAGTPSRLSQAHNES--ITAEMIFKLAEEGDTMCLGIVEEAADCLGFACVNFSRILYPELILFSGGLAEAGEFFLEMIRR-AYSKYTWTKFPNEVSVRKSTAGYD---AGIIGAAAA 393
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A1W0A0Q9_9STRA (Glucokinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0Q9_9STRA) HSP 1 Score: 127 bits (319), Expect = 2.380e-32 Identity = 80/183 (43.72%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDET----CSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAA 531
LGTGVG GIV + +IV G G IEGGH+I+ P N R C C QRGCLEA+ S TA+ A R N+E + + S I A+ +F AA GD+V E++DE Y+GLAC N CR LDP I+ +GG++++ E ++ +R+ A++K WT LP+ + AS Y+ SG++GAA
Sbjct: 136 LGTGVGFGIVNNDEIVSGGTGCIEGGHIIMVP--NGRLCGCSQRGCLEAYSSATALIGQAKLRAT-NSEVSSALSSVSVDEINAKMIFEFAANGDQVCKELIDEVGNDVADYLGLACVNFCRTLDPEMIVFSGGIAEAGESFIQLIRE-AYNKYTWTRLPNPVVLKKASVGYD---SGILGAA 311
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A485KWN7_9STRA (Aste57867_12717 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWN7_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.570e-32 Identity = 81/185 (43.78%), Postives = 112/185 (60.54%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVA------AIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAA 531
LGTGVG G+V KI+ G GMIEGGH+IV P N R C C Q+GCLE + S +AV AI +EK + D ITA+ VF A GD+V+++++ E Y+G AC N CR LDP I+L+GGL+++ EG ++++R A++K WT LP+ I AS Y+ SG++GAA
Sbjct: 134 LGTGVGFGVVNDDKIIAGGTGMIEGGHIIVVP--NGRPCGCTQKGCLERYSSASAVIEQAKLKAIDPSLTTILSEKKVDD-------ITAKDVFDAADAGDQVSIDLIAEVADYLGFACVNFCRILDPEMIVLSGGLAEAGEGFIQQIRD-AYTKYTWTKLPNPVVIEKASVGYD---SGIIGAA 305
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A6A5AB26_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AB26_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.970e-32 Identity = 78/182 (42.86%), Postives = 112/182 (61.54%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAV---TITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAA 531
LGTGVG G+V KIV G GMIEGGH+IV P N R+C C Q+GCLE + S +AV ++ K A + + S + +ITA+ VF A GD+V+ +++E Y+G AC N CR LDP I+L+GGL+++ E ++++R A++K WT LP+ I AS Y+ G++GAA
Sbjct: 63 LGTGVGFGVVNDDKIVAGGTGMIEGGHVIVVP--NGRACGCTQKGCLERYSSASAVI----DQAKLKAVDPTLTTSLSQLKVDSITAKDVFDAADAGDQVSKAIIEEVAEYLGFACVNFCRTLDPEMIVLSGGLAEAGEAFIQQIRD-AYTKYTWTKLPNPVIIEKASVGYD---CGIIGAA 234
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A067CJ68_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJ68_SAPPC) HSP 1 Score: 126 bits (316), Expect = 5.610e-32 Identity = 80/179 (44.69%), Postives = 109/179 (60.89%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAA 531
LGTGVG GIV + +IV G G IEGGH+I+ P N R C C QRGCLE + S +A+ A R + + P TITA+ VF A +GD+V E+V E Y+GLAC N CR LDP I+ +GGL+++ E ++++R A++K WT LP+ I AS Y+ SG++GAA
Sbjct: 133 LGTGVGFGIVNNDEIVAGGTGCIEGGHIIMVP--NGRLCGCTQRGCLEQYSSASALIGQAKLRASSSEVMTRLASVPIE-TITAKMVFGFADEGDDVCNELVAEVADYLGLACVNFCRTLDPEMIVFSGGLAEAGEPFMQRIRD-AYNKYTWTRLPNPVVIEKASVGYD---SGIIGAA 304
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: W4G439_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G439_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.010e-31 Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIAST-YERRLSGVMGAA 531
LGTG+G G+V I+ G GMIEGGH+IV P N R+C C Q+GCLE + S TA+ A + + + D ITA+ VF AA GD VA E++ E Y+G AC N CR LDP I+L+GGL+++ E ++ +R A++K WT LP+ I AS Y+ SG++GAA
Sbjct: 169 LGTGIGFGVVNDNAILAGGTGMIEGGHVIVVP--NGRACGCTQKGCLERYSSATALIQQAKLKATDKSLNTKLSDL-KIDEITAKQVFETAATGDSVAKELIAEAADYLGFACVNFCRILDPELIVLSGGLAENGEYFIQAIRD-AYTKYTWTKLPNPVRIEKASVGYD---SGIIGAA 340
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Match: A0A2E5G0W0_9BACT (Glucokinase n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E5G0W0_9BACT) HSP 1 Score: 124 bits (310), Expect = 4.220e-31 Identity = 79/182 (43.41%), Postives = 110/182 (60.44%), Query Frame = 1
Query: 1 LGTGVGLGIVCSGKIVMGSRGMI-EGGHMIVEPGRNARSCPCGQRGCLEAHVSQTAVAAIASERMKWNAEKNMMDDNPSAVTITAETVFARAAQGDEVAMEVVDETCSYIGLACFNLCRALDPAAILLAGGLSKS-EGLVEKVRQVAFSKRGWTLLPHECEIAIASTYERRLSGVMGAAGAA 540
LGTGVG G++ ++V GS G E GH+IV+P + R C CGQ GCLEA+ S T VA A E + + D P ITAE VF AA+GD VA +++++T ++G+AC NLCR LDP I+L+GG+SK+ + L E +R AFS W + E ++I +G++GAA AA
Sbjct: 140 LGTGVGCGMIIDSQLVHGSDGNGGEAGHLIVQP--DGRPCGCGQHGCLEAYASATQVARRAHEAAANHPTSKLGDIGPLD-NITAEHVFTAAAEGDLVASQIIEQTGYFLGIACVNLCRLLDPQMIVLSGGMSKAGKQLFEPIRH-AFSSENWRM--SEPTVSIVPAQLGVNAGIIGAAAAA 315 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5465.12854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5465.12854.1 >prot_H-elongata_contig5465.12854.1 ID=prot_H-elongata_contig5465.12854.1|Name=mRNA_H-elongata_contig5465.12854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp LGTGVGLGIVCSGKIVMGSRGMIEGGHMIVEPGRNARSCPCGQRGCLEAHback to top mRNA from alignment at H-elongata_contig5465:3070..5138- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5465.12854.1 ID=mRNA_H-elongata_contig5465.12854.1|Name=mRNA_H-elongata_contig5465.12854.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2069bp|location=Sequence derived from alignment at H-elongata_contig5465:3070..5138- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5465:3070..5138- >mRNA_H-elongata_contig5465.12854.1 ID=mRNA_H-elongata_contig5465.12854.1|Name=mRNA_H-elongata_contig5465.12854.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1086bp|location=Sequence derived from alignment at H-elongata_contig5465:3070..5138- (Himanthalia elongata Himel1 dioecious)back to top |