mRNA_H-elongata_contig5464.12852.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig5464.12852.1
Unique NamemRNA_H-elongata_contig5464.12852.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: D8LTF0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF0_ECTSI)

HSP 1 Score: 567 bits (1461), Expect = 4.890e-179
Identity = 374/841 (44.47%), Postives = 469/841 (55.77%), Query Frame = 2
Query:  497 VTNEIDSSVTSTDGIPALEETGDA-VAETFAGGQDARMES----------YFLRRRTKTVAKSE--ATNGPPEIKMHRHGRGAGKVDGWRSTYMVQCLRHHKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGDTERKNEAKSGAQPCQ----ADEDAGYVADSERRPGTAVNT----DGVAPRDL--PTESLSPASGV--SDEAASLGRGSSDLGHSGGS-ENGSNSTALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGGVDPSANDQTGGA----GEGLGEARGKTASGTRKGLEIGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTSRQQTNAVSTGGAPNDRFNGGSGGGSSAVPSCS--------------------TVTVAASDAGATSTSGRFKSRISSSFSVQCSTRPKVATVATFLPTSAFDA--VLGSGDIISNDSPDRLLRG-EGAKGTERRPQVTRPSSYRRVPSMPLSRGTDGPR-------------RRRWTFGGHAR-FRGESGESYGDKVLFTGKTKSGPTPLSQPVVRAQTRALNKGRLPDASSTSRSSLDSRGKPTALDEESQVRSQAMKPLAEAPASEAKLLEEWRKSGRLSVGS-KIRGIVSADYSGDVKVFLGFVDELDGAG 2815
            VT  +D   TS DGIPA  +   A V E  A   D+R  S          Y LRR  K   KS+    N PPE+ + +HGRG GK   W+S +MVQCLR+H+GPVWT++FN  GTR+ATGG+DGKVV+W++AV   +T  +T        TE   +   GA P       D +    AD++    + V T    +G   R+    TES+S AS +   D AAS+G GSSDLG SG S E G + +  EVF  TP RVF GH+SD+VDLSWSHSDFLCSASIDH VMLWHP+R ERLGTFTHPDFVTSV FHPLDDH+FLTGCFDKRLRLW + +GRVVDWVQCQDM+S+A F+PDG+LA AGL++GRV+F+HTT LRYYTQIHCRNR+G+ RRGKKVTGL FIETS LH  G    G           G                         +  GKA++MS+QYSLL+TTNDSRLR+YDLDNF M+SKFKGL NDGIQIKASFS DGMFVVSGSEDGQVYLWN+ +++     +                  VPSC+                              AT+ +   KSR SSSF VQC+T P+VAT A FLPT+A +A  +  +G +  +DS   + RG +G +G                P MP +    G               RRRW+F GHAR     +G     K L    T  G    +  +       +NK   P A + + +S+       AL  E   +     P       EA      +  G    G   ++ +VSAD++G++K+FLG V  L+G G
Sbjct:  154 VTPSLDPGATSPDGIPAPAKDATAEVGELPADKHDSRSRSKSHPCKRTCSYRLRRGGKGRPKSDRRTANRPPEVHVKQHGRGGGKGKDWQSMHMVQCLRYHEGPVWTMKFNVRGTRLATGGQDGKVVIWDLAVPPGSTAAAT--------TEVVRDGSEGASPPMEGDGVDANTNGGADAQESSSSGVETSSTLEGEGSRETLRKTESMSCASTILSDDGAASVGDGSSDLGLSGSSGERGDSWSGSEVFAPTPVRVFEGHKSDIVDLSWSHSDFLCSASIDHTVMLWHPIREERLGTFTHPDFVTSVHFHPLDDHIFLTGCFDKRLRLWKIPDGRVVDWVQCQDMVSAASFSPDGKLAAAGLFNGRVMFYHTTDLRYYTQIHCRNRHGSKRRGKKVTGLDFIETSRLHPCGDAAAGXXXXXXXXXXAGCPVAXXXXXXXXXXXXXXXXXXXXHLRGGKADSMSSQYSLLTTTNDSRLRVYDLDNFAMTSKFKGLVNDGIQIKASFSTDGMFVVSGSEDGQVYLWNSKQRRQRTARS------------------VPSCNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTPATLVKSRTSSSFDVQCATLPQVATAAAFLPTAALEAARLAAAGGVERDDSAADVKRGTKGWRG-----------GVHHSPPMPAAAHATGDAQEGXXXXXXXXXXRRRWSFTGHARSVAAGAGAGAHPKTLPQATTGGGKAESAAMLPHVSEPWINKNGSPRAVNAAEASM-------ALGSEIAAQQHVGSP-------EATRTTPGQSCGAFPGGEGMVKAVVSADFNGEIKIFLGVVGRLEGCG 943          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: A0A7S3XNZ4_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNZ4_HETAK)

HSP 1 Score: 253 bits (645), Expect = 2.820e-69
Identity = 165/471 (35.03%), Postives = 235/471 (49.89%), Query Frame = 2
Query:  677 IKMHRHGRGAGKVDGWRSTYMVQCLRHHKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERM-------KGDTERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLSPASGVSDEAASLGRGSSDLGHSGGSENGSNSTALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGGVDPSANDQTGGAGEGLGEARGKTASGTRK---------GLEIGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTSRQ-QTNAVSTGGAPNDR 2038
            +K  +  RGA   D      ++Q +  H+G +WTL F+  G  +A+GG+D  ++VW ++  +  ++D              + D  R  EA               +   E RP     +D                  ++E ASLG G    G  G            +F   P R + GH +D++D+SWS +DFL SASID  V LWH  R + L  F H DFVT V FHP  + +F++GC           +GRV +W+Q  +++++A+F PDG   VAGLY G++IF+ T G+RYYTQ+ CRNR G  R G+KVTGLAF                + P  ++  GG G      RG TA+G            G              + LL TTNDSRLR+Y +D++ M+ K+KGLAND +QIKASFSED  +++ GSE+G+VY+W T R+   +  STG  P  R
Sbjct:   29 VKAKKKPRGAEFAD----LALLQSVNAHRGAIWTLAFSPDGALLASGGQDTVLLVWRVSRESRISRDLRRGXXXXXXXXADQNDAVRLKEA---------------IGALEGRPFPDDGSD------------------AEENASLGGGVPGGGGVGPE------CCDALFLDVPIRRYAGHTADIIDVSWSRTDFLLSASIDKTVRLWHATREDCLHHFQHSDFVTGVDFHPTQEKLFVSGCXXXXXXXXXXPDGRVKEWIQAPEIVTAAKFGPDGATVVAGLYHGQIIFYQTDGMRYYTQVECRNRKGPLRNGRKVTGLAFAH--------------LPPGGSNAAGGGGA---SPRGPTAAGGXXXXXXXXXSVGXXXXXXXXXTGGGGHQLLVTTNDSRLRLYRVDDYLMACKYKGLANDSMQIKASFSEDNRYIICGSENGRVYIWATQRKGDKDGGSTGANPGRR 439          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: A0A7S2KRK6_9STRA (Hypothetical protein n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KRK6_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.490e-62
Identity = 124/294 (42.18%), Postives = 178/294 (60.54%), Query Frame = 2
Query: 1151 TALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAF---IETSLLHNVGCHPCGGVDPSANDQTGGAGEGLGEARGKTASGTRKGLEIGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLW----NTSRQQTNAV 2011
            T LE+  S P + +R H +DV+DLSWSH++FL +AS+D  V L+H  +   L  F H + V SV FHPLDD  F++G  DK+LRLW +T+GRV DW Q  ++I+S RFTPDG+ AVAGL  G+V  +   GL+YYTQI CRNR G NR+GKKVTG++F   ++    H+   HP      S  ++       L E  G++ +       +G  +A +      +L +TNDSR+R+Y L++F M  K+KG  N+ +QI+A  SE G  +  GSE G  ++W    N +R + N +
Sbjct:   31 TNLEIISSEPVQRYRDHTADVIDLSWSHTNFLLTASVDKSVRLYHFSKSNCLHLFKHANLVASVDFHPLDDRYFISGGLDKKLRLWNITDGRVKDWAQAPEVITSTRFTPDGKYAVAGLLRGQVYLYEADGLKYYTQIACRNRSGKNRKGKKVTGISFLREVDDKSEHSEEHHP------SLTER-------LSET-GRSVANLVATKVLGNPEALSTRRTDRMLVSTNDSRVRLYGLNDFCMIRKYKGHTNNSMQIRARVSESGSHIACGSESGHCFIWDVDPNKNRLKKNMI 310          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: A0A7S2ERU9_9STRA (Hypothetical protein n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERU9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.570e-61
Identity = 157/451 (34.81%), Postives = 223/451 (49.45%), Query Frame = 2
Query:  758 HKGPVWTLEF------------NRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGDTERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLSPASGVSDEAASLGRGSSDLGHSGGSENGSNSTALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGC--HPCGGVDPSANDQTGGA-GEGLGEARGKTASGTRKGLEIG-------------------MGKANNMSAQYSL------LSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTS 1990
            H GP+W + F            N H   +A+GGEDG + +W +A +++   + +E    + + E++                  + D E   G                  SP+S ++D+  + G G  ++G           T +++  S P R +  H   V+D SWS ++FL SAS+D  V LWH  R   L  F H D VTSV FHP DD  FL+G  DK+LR+W++ +GRV DW Q  +MI++AR+TPD +  VAGL  G+V F+   GL+YYTQI C+NR G+ + GKKVTGL F+  +    +     P GG   S      G+         G  A+   KG +                     + K    S Q  +      L TTNDSRLR++ LD+F M  K+KGL N  +QI+A F+E G F+VSGSE G VY+WNTS
Sbjct:  308 HNGPIWCMAFSPGIHSNDTNGANGHSKYLASGGEDGVICIWAVAPNSERIHEKSEQFWKQEEDEKE-----------------VMVDMEGMEG------------------SPSSPMADKPTTSGNGP-EMG-----------TDVQIISSKPIRRYTDHTEHVIDFSWSATNFLLSASLDKTVRLWHVSRPGCLQIFQHADLVTSVAFHPRDDGYFLSGGSDKKLRVWSILDGRVRDWAQAPEMITAARYTPDARFVVAGLLHGQVYFYDVDGLKYYTQISCKNRSGSQKEGKKVTGLTFMRGAEYDGISSKSQPPGGERASRESMMAGSISISTNSLVGTHATSMIKGPDNSTALTPRSSIRATSYENSPPVSKLKYRSRQSKIIYRDKMLVTTNDSRLRLFGLDDFCMIRKYKGLVNMQMQIRARFNETGNFIVSGSESGNVYIWNTS 711          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: B8BQJ4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ4_THAPS)

HSP 1 Score: 241 bits (614), Expect = 3.390e-61
Identity = 154/418 (36.84%), Postives = 226/418 (54.07%), Query Frame = 2
Query:  758 HKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGDTERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLSPASGVSDEAASLGRGSSDLGHSGGSENGSNSTALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIE---TSLLHNVGCHPCGGVDPSANDQTG-----GAGEGLGEARGKTASGTRKGLEIGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNT 1987
            H GP W   F+  G  +ATGGEDG V +W +A  +           +  D            P +A E    + D+E R G   ++      D  +  +  A+   +E  +     + +G   G E  +N   LE+  S P + F+ H +DV+DLSWSH+ FL +AS+D  V L+H  + + L  F H + V SV F+P DD  F++G  DK+LRLW++T+GRV DW Q  D+I++ARFT DG+ AVAGL+ G+V F+   GL+YYTQI CRNR G +R GKKVTG++F+       L      P  G + + ++Q+      G    + EA  + A         G  +A  +     +L +TNDSR+R+Y L++F +  K+KG  N  +QI+A  SE G F+ SGSE G V++WNT
Sbjct:  621 HNGPAWCSAFSLDGRFLATGGEDGNVCIWAVAPKST---------NVHPDCVAPAPPXXXGSPSKASE----MDDAEIR-GVGTDSPLSTGSDQRSHGVEKAASEEEEEEASAHPLNFIGT--GPEVATN---LEILSSEPIQRFKDHTADVIDLSWSHTHFLLTASLDSSVRLYHYSKSQCLHLFKHANLVASVAFNPNDDRYFISGGIDKKLRLWSITDGRVRDWAQAPDVITAARFTSDGKYAVAGLFRGQVYFYDADGLKYYTQIACRNRSGKHRMGKKVTGISFVRGERDDWLKAKQNAPSEGGEATLDNQSSLSKLSGV---VNEAGNRVARRVSLTFRGGESRAEALRYTERMLVSTNDSRVRLYGLNDFCLIRKYKGHTNYSMQIRARVSESGNFIASGSESGHVFIWNT 1016          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: D8LTA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA8_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 3.610e-61
Identity = 167/455 (36.70%), Postives = 238/455 (52.31%), Query Frame = 2
Query:  737 MVQCLRHHKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGDTERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLSPASG----VSDEAASLGRGSSDL-GHSGGSE----NGSNSTALE--VFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGGVDPSANDQTGGAGEGLGEARGKTASGTRKGLE---------------------------IGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNT 1987
            + Q LR H GP+WT  FN+ G  +AT G+D ++++  +      T+D    E+  GD +   +   G     A + A   A+   RP +         R +  ES+   +G    VS++A + G G   L G  GGS      GS+  AL   +    P +++  H+ DVV +SWS +DFL SAS+D  V LWH  +   L  F H D VTSV FHPL +H F                GRV +W Q  DM+++A+F+ DGQ+ VAGLY G+V+F+ T G+RY+TQI CRNR GT +RG KV+G AF  T+     G    GG   +  D +G  G G       ++  T +  E                           I  G  +++  Q  LL TTNDSRLR+Y+ D+F M++K+KG AND +QI A+FSEDG  ++SGSE+G+VY+W+T
Sbjct:  531 LFQELRCHDGPIWTAAFNQSGEFLATAGQDARILLHRVG----DTRDDLRGEKA-GDGDSGGD---GGSKAAAPDSASTGAEGSGRPRSEKGRPEPGTRGV--ESVDCGNGGDGTVSEDATTKGSGRPPLSGSVGGSXXXXXRGSDGRALSTVMIDPEPWQIWEAHKGDVVAISWSRNDFLLSASLDKTVRLWHTTQASCLHCFQHADTVTSVDFHPLLEHFFXXXXXXXXXXXXXXXXGRVQEWQQAPDMVTAAKFSLDGQMIVAGLYMGQVLFYQTEGMRYFTQIECRNRRGTKKRGCKVSGFAFRRTAF--GGGDEAGGGKKDAGVDGSGAGGVGGSNRSAGSSPTTGRRSEPVTPSPAFGGPVGRGXXXXXXXXXXXVIAGGAGSHVPEQ--LLVTTNDSRLRLYNTDDFGMNAKYKGFANDTLQITATFSEDGKQIISGSENGKVYVWST 971          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: W7U9T0_9STRA (Wd repeat protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9T0_9STRA)

HSP 1 Score: 223 bits (569), Expect = 1.670e-58
Identity = 124/290 (42.76%), Postives = 170/290 (58.62%), Query Frame = 2
Query: 1157 LEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGGVDPSANDQTGGAGEGLGEARGKTASGTRKGLEIGMGKAN---------NMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTSRQQ 1999
            L++   +P R FR H +DV+DLSW+  +FL SASID  V LWH  R E L  + H D VT+V FHP  DH+F              T+GRV +W    DMI++A F+P+G +AVAGLY G+V F+ T G++YYTQ+ CRNR+G  + GKKVTGL +  +S  H V         PS++      G  L +    T+ G      +  G  +           +    LL TTNDSRLR+Y  ++++M  K+KGL ND +QIKASFSEDG +V+SGSE+GQ+Y+W  +  Q
Sbjct:  194 LKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARSECLHVYPHVDCVTAVDFHPKIDHLFXXXXXXXXXXXXXXTDGRVKEWANTPDMITAACFSPEGSMAVAGLYRGQVFFYQTEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSS--HTVAA----AFPPSSSGGATTPGPRL-QGAPSTSGGHSSSFPVSSGPVSAPGPTPHSVTGAGCEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKASFSEDGKYVISGSENGQIYIWKGTTPQ 476          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: A0A6T7JLR4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JLR4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 3.390e-57
Identity = 146/414 (35.27%), Postives = 203/414 (49.03%), Query Frame = 2
Query:  758 HKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGDTERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLSPASGVSDEAASLGRGSSDLGHSGGSENGSNSTALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGG---VDPSANDQTGGAGEGLGEARGKTASGTRKGLEIGMGKANNMSAQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTS 1990
            HKGP+W   F++ G  +ATGG+DGKV++W +A  + A           G+       K+   P     D      S      +  +D  AP    T  ++P  G+                            +E+    P RV+  H  DV+D SWSHS FL SAS+D  V LWH  + E L  F H D VTSV FHP  D                  +GRV DW Q  + I+SAR+TP G+ AVAGL+ G+V F+   GL YYTQI  +NR+G    G KVTGLAF+ T+   N G     G     P+  D T  + +     + ++          G G       +  L+ST NDSRLR++ L+++ M  K+KG  N+ +QI+AS SE G ++VSGSE+G+VY+WNT+
Sbjct:  495 HKGPIWRTAFSQDGRFLATGGQDGKVILWRVAPKSKA---------FHGE-------KAETYPPWIPRDKVAKTASSSLGKDSQKSDETAPPPT-TMGMAPEIGME---------------------------IEIISREPERVYSEHRGDVIDFSWSHSGFLLSASVDKTVRLWHVSKSESLHVFQHADLVTSVDFHPTQDXXXXXXXXXXXXXXXXXXDGRVKDWAQTPEAITSARYTPSGKFAVAGLFHGQVYFYGAEGLAYYTQIASKNRHGAKSMGTKVTGLAFLHTA---NSGVSDLAGSPSTSPTGADSTDPSTKNARSEQRRSIWSAASRFAPGKGNKRVRFTEQMLVST-NDSRLRLFGLNDYCMVRKYKGGKNNSMQIRASLSESGDYIVSGSENGRVYIWNTA 860          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: K0T8Q7_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T8Q7_THAOC)

HSP 1 Score: 217 bits (553), Expect = 4.210e-55
Identity = 122/297 (41.08%), Postives = 174/297 (58.59%), Query Frame = 2
Query: 1151 TALEVFGSTPARVFRGHESDVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTT-GLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSL---LHNVGCHPCGGVDPSANDQTGGAGEGLGEARGKTASGTRKGLEIGMGKANNMSAQYSL------LSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTSRQQTNAV 2011
            T LE+    P + +  H++DV+DLSWSH++FL +AS+D  V L+H  + E L  F H + V SV FHP DD  F++G  DK+LRLW VT+GRV +W Q   +I++ RF+PDG+ A AGL+ G+V ++    GL+YYTQI CRNR G +R+GKKVTG++F+       L      P     P   D       G   A+  + SG      +   + N   A  +L      L +TNDSRLR+Y+L++F +  K+KG +N  +QI+A  SE G  +  GSE GQV++W TS +    V
Sbjct:  374 TNLEILSKEPIQRYTDHDADVIDLSWSHTNFLLTASLDKSVRLYHHTKSECLHLFKHANLVASVDFHPSDDRYFISGGVDKKLRLWDVTSGRVKEWAQSPSVITTVRFSPDGKYACAGLFRGQVYWYSVDDGLKYYTQIACRNRSGKHRQGKKVTGISFVRAERDDWLSTSANPPM--TTPDCEDSE----IGHSIAKKLSHSGREVAARLSTLRGNGAKAPDALRYTERMLVSTNDSRLRLYNLNDFCLIRKYKGNSNLSMQIRARVSESGSHIACGSETGQVFIWETSDKSRRRV 664          
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Match: A0A7S1ZRZ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZRZ4_TRICV)

HSP 1 Score: 206 bits (525), Expect = 1.180e-54
Identity = 115/255 (45.10%), Postives = 156/255 (61.18%), Query Frame = 2
Query: 1271 VMLWHPLRGERLGTFTHPDFVTSVQFHPLDDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGLYDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGCHPCGGV------DPSANDQTGGAGEGLGEARGKTASGTRKGLEI-----GMGKANNMS----AQYSLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGSEDGQVYLWNTS 1990
            V L+HP R   L  F H DFVT+V FHP DD +FL+G FD++LR+W++  GRV DW Q  DMI++ARF PDG +AVAGL+ G+V F+   GLRYYTQI  RNR G  + GKKVTGL+F+  +                    P+ ++  G  G G G    K+ S  +KG  +     G GKA + S    A+  +L TTNDSRLR+Y ++++ +  KFKGL N  +QI+A FSE G +++ GSE G V +WNT+
Sbjct:    2 VRLFHPPRPSCLHVFRHADFVTAVDFHPCDDGLFLSGGFDRKLRVWSIPEGRVRDWAQAPDMITAARFAPDGNMAVAGLFKGQVYFYLAEGLRYYTQISARNRKGKEKMGKKVTGLSFLTGTKEEGXXXXXXXXXXXXXPSSPTRSNDDGAKGGGRGRRTIKSLS-PKKGTAVHRAWSGKGKAMSRSPKRRAKDMMLVTTNDSRLRLYGMNDYCIVRKFKGLVNSSLQIRARFSESGNYIICGSETGSVLVWNTA 255          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5464.12852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTF0_ECTSI4.890e-17944.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XNZ4_HETAK2.820e-6935.03Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S2KRK6_9STRA4.490e-6242.18Hypothetical protein n=2 Tax=Skeletonema marinoi T... [more]
A0A7S2ERU9_9STRA1.570e-6134.81Hypothetical protein n=4 Tax=Ditylum brightwellii ... [more]
B8BQJ4_THAPS3.390e-6136.84Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
D8LTA8_ECTSI3.610e-6136.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7U9T0_9STRA1.670e-5842.76Wd repeat protein n=2 Tax=Monodopsidaceae TaxID=42... [more]
A0A6T7JLR4_9STRA3.390e-5735.27Hypothetical protein n=1 Tax=Attheya septentrional... [more]
K0T8Q7_THAOC4.210e-5541.08Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
A0A7S1ZRZ4_TRICV1.180e-5445.10Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5464contigH-elongata_contig5464:2..8378 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score580.5
Seed ortholog evalue1.4e-162
Seed eggNOG ortholog2880.D8LTF0
Preferred nameWDR44
KEGG koko:K20241,ko:K20310
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005856,GO:0005874,GO:0008150,GO:0010008,GO:0012505,GO:0015630,GO:0016020,GO:0017016,GO:0017137,GO:0019899,GO:0030334,GO:0031090,GO:0031267,GO:0031410,GO:0031982,GO:0031984,GO:0032879,GO:0040012,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048471,GO:0050789,GO:0050794,GO:0051020,GO:0051270,GO:0065007,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:2000145
EggNOG free text desc.Rab GTPase binding
EggNOG OGsKOG0283@1,KOG0283@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons10
Model size4313
Cds size2814
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5464.12852.1prot_H-elongata_contig5464.12852.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig5464 1494..8371 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930890.2775743-UTR-H-elongata_contig5464:1..14931622930890.2775743-UTR-H-elongata_contig5464:1..1493Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5464 2..1493 -
1691679613.3263757-UTR-H-elongata_contig5464:1..14931691679613.3263757-UTR-H-elongata_contig5464:1..1493Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5464 2..1493 -
1622930890.5071-UTR-H-elongata_contig5464:8371..83781622930890.5071-UTR-H-elongata_contig5464:8371..8378Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5464 8372..8378 -
1691679613.426781-UTR-H-elongata_contig5464:8371..83781691679613.426781-UTR-H-elongata_contig5464:8371..8378Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig5464 8372..8378 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930890.2948463-CDS-H-elongata_contig5464:1493..18501622930890.2948463-CDS-H-elongata_contig5464:1493..1850Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 1494..1850 -
1691679613.3408875-CDS-H-elongata_contig5464:1493..18501691679613.3408875-CDS-H-elongata_contig5464:1493..1850Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 1494..1850 -
1622930890.3164358-CDS-H-elongata_contig5464:2038..25331622930890.3164358-CDS-H-elongata_contig5464:2038..2533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 2039..2533 -
1691679613.349527-CDS-H-elongata_contig5464:2038..25331691679613.349527-CDS-H-elongata_contig5464:2038..2533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 2039..2533 -
1622930890.3373983-CDS-H-elongata_contig5464:3526..36251622930890.3373983-CDS-H-elongata_contig5464:3526..3625Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 3527..3625 -
1691679613.3573892-CDS-H-elongata_contig5464:3526..36251691679613.3573892-CDS-H-elongata_contig5464:3526..3625Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 3527..3625 -
1622930890.359375-CDS-H-elongata_contig5464:4048..43571622930890.359375-CDS-H-elongata_contig5464:4048..4357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 4049..4357 -
1691679613.3652616-CDS-H-elongata_contig5464:4048..43571691679613.3652616-CDS-H-elongata_contig5464:4048..4357Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 4049..4357 -
1622930890.3772473-CDS-H-elongata_contig5464:4915..50511622930890.3772473-CDS-H-elongata_contig5464:4915..5051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 4916..5051 -
1691679613.3731384-CDS-H-elongata_contig5464:4915..50511691679613.3731384-CDS-H-elongata_contig5464:4915..5051Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 4916..5051 -
1622930890.390655-CDS-H-elongata_contig5464:5401..55331622930890.390655-CDS-H-elongata_contig5464:5401..5533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 5402..5533 -
1691679613.3807251-CDS-H-elongata_contig5464:5401..55331691679613.3807251-CDS-H-elongata_contig5464:5401..5533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 5402..5533 -
1622930890.4037187-CDS-H-elongata_contig5464:5879..60101622930890.4037187-CDS-H-elongata_contig5464:5879..6010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 5880..6010 -
1691679613.3936665-CDS-H-elongata_contig5464:5879..60101691679613.3936665-CDS-H-elongata_contig5464:5879..6010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 5880..6010 -
1622930890.419701-CDS-H-elongata_contig5464:6361..67601622930890.419701-CDS-H-elongata_contig5464:6361..6760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 6362..6760 -
1691679613.4035459-CDS-H-elongata_contig5464:6361..67601691679613.4035459-CDS-H-elongata_contig5464:6361..6760Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 6362..6760 -
1622930890.460631-CDS-H-elongata_contig5464:7252..75981622930890.460631-CDS-H-elongata_contig5464:7252..7598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 7253..7598 -
1691679613.411266-CDS-H-elongata_contig5464:7252..75981691679613.411266-CDS-H-elongata_contig5464:7252..7598Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 7253..7598 -
1622930890.4857376-CDS-H-elongata_contig5464:7961..83711622930890.4857376-CDS-H-elongata_contig5464:7961..8371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 7962..8371 -
1691679613.4190972-CDS-H-elongata_contig5464:7961..83711691679613.4190972-CDS-H-elongata_contig5464:7961..8371Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig5464 7962..8371 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig5464.12852.1

>prot_H-elongata_contig5464.12852.1 ID=prot_H-elongata_contig5464.12852.1|Name=mRNA_H-elongata_contig5464.12852.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=938bp
MLKLEDWRSISVSRLQVKPRLEQELDPDFAEPAATGPSANAVDGHSMRLD
IVDDLVTHGEDMSTASGTTVTEGGWDSSGNGLEEVGDPVQGVSVASGRKT
DKAGKEKNGIKMAAPAMNAAVSPIKNSLLWVLENARSRTRQRQAKTKLKK
GAGKRRPDGDPNGVTNEIDSSVTSTDGIPALEETGDAVAETFAGGQDARM
ESYFLRRRTKTVAKSEATNGPPEIKMHRHGRGAGKVDGWRSTYMVQCLRH
HKGPVWTLEFNRHGTRMATGGEDGKVVVWNIAVSADATKDSTEDERMKGD
TERKNEAKSGAQPCQADEDAGYVADSERRPGTAVNTDGVAPRDLPTESLS
PASGVSDEAASLGRGSSDLGHSGGSENGSNSTALEVFGSTPARVFRGHES
DVVDLSWSHSDFLCSASIDHKVMLWHPLRGERLGTFTHPDFVTSVQFHPL
DDHVFLTGCFDKRLRLWTVTNGRVVDWVQCQDMISSARFTPDGQLAVAGL
YDGRVIFHHTTGLRYYTQIHCRNRYGTNRRGKKVTGLAFIETSLLHNVGC
HPCGGVDPSANDQTGGAGEGLGEARGKTASGTRKGLEIGMGKANNMSAQY
SLLSTTNDSRLRIYDLDNFTMSSKFKGLANDGIQIKASFSEDGMFVVSGS
EDGQVYLWNTSRQQTNAVSTGGAPNDRFNGGSGGGSSAVPSCSTVTVAAS
DAGATSTSGRFKSRISSSFSVQCSTRPKVATVATFLPTSAFDAVLGSGDI
ISNDSPDRLLRGEGAKGTERRPQVTRPSSYRRVPSMPLSRGTDGPRRRRW
TFGGHARFRGESGESYGDKVLFTGKTKSGPTPLSQPVVRAQTRALNKGRL
PDASSTSRSSLDSRGKPTALDEESQVRSQAMKPLAEAPASEAKLLEEWRK
SGRLSVGSKIRGIVSADYSGDVKVFLGFVDELDGAGS*
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mRNA from alignment at H-elongata_contig5464:2..8378-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig5464.12852.1 ID=mRNA_H-elongata_contig5464.12852.1|Name=mRNA_H-elongata_contig5464.12852.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8377bp|location=Sequence derived from alignment at H-elongata_contig5464:2..8378- (Himanthalia elongata Himel1 dioecious)
AGAGTCCATGCTAAAGCTGGAGGATTGGCGATCGATTTCTGTGTCAAGAC TGCAAGTCAAACCACGGCTGGAGCAGGAGCTAGATCCGGACTTCGCGGAG CCTGCGGCGACTGGCCCGTCCGCGAACGCAGTCGATGGCCACAGCATGAG ATTGGACATCGTCGACGACCTGGTGACACACGGCGAAGATATGTCTACCG CATCAGGAACAACGGTGACGGAAGGGGGGTGGGACAGCAGCGGCAACGGC TTAGAGGAGGTGGGCGATCCGGTGCAAGGGGTCTCGGTGGCTTCGGGGAG GAAGACCGACAAGGCAGGGAAAGAAAAAAATGGCATAAAAATGGCGGCCC CAGCTATGAATGCGGCTGTGTCACCGATCAAAAATTCATTGCTTTGGGTT TTGGAAAACGCTCGAAGGTAAGCATTTTTACGATTATATTTCTCGATGCG GATGCGGTTGGTTGTGGCGTGTGAAGGAGGCTAAGATGTGGGGGGGGGGG GGGGGGACTGGTTACAGCTGTGCCATGCGTTTCCGGTCTCTCTACAGGCA TATGAATGTTCATATTAATATAAAAATGAATATAGTGCTGTAGTGCAAGT GAGATCGGTATTCTACGAAAGATGCACCCAAGGACACGGAGCCAGGAAAC GAATGATGCTCGCCTCTTAGGTACCGTCTGCAATTCAGCGATCGCCGATC GCCATCAAATACCAAGTTTTAATGGAGCATGCTCGTGCGCTACTCGTCCG CGGTGACACGGGCGTGACGGAATTCTCTAGCCGAACGCGCCAACGACAAG CCAAAACCAAGCTCAAGAAGGGCGCAGGCAAGCGGAGACCGGACGGCGAC CCCAATGGCGTCACAAACGAGATCGACTCGAGCGTGACTTCAACCGACGG GATCCCTGCGTTGGAAGAGACGGGAGACGCGGTCGCGGAGACTTTCGCGG GCGGGCAAGACGCTAGAATGGAATCTTATTTCCTGAGAAGGCGCACTAAG ACTGTGGCGAAGAGCGAGGCCACGAACGGTCCGCCGGAGATCAAAATGCA TCGCCACGGAAGGGGCGCGGGGAAGGTGGACGGTTGGCGCTCGACGTACA TGGTCCAATGCCTTCGGCACCACAAGGTGGGAGACAGATGTTGGCGGAGG ATGTGGAAAAGAGGGTCAGAGAGTTGGCCCTCTGTGGCAATTTTGACCGT TGTCGGCCATGTCTACCTGTCCCCCGGCCTAACTATTGAATGATAGTTGT CGTGAGCAGAGTTCCGCGAACGGCACACCCGGATTTGCCTGCCGTGTAGA AGTTCGGCGTGTGTGTGTAAAGTGTTTTTGTGCTCGCTCAGGTTAAAAAT AAAAGCTAGGTGCTTTAAAACCCGAGCGAATCCAATTGCGATGTCTAGCC GGTCCAAGGATAGATGGCACAACACGTTGCTCAAGACGAATCATTCCCGC TATACCCTGTACCCTGTACCCTGTACCTTCAATCATCCCTCTCATTCTCC CTATTTCGAGTTTTTTTGTTTTGTTTGCTCTCTGCTTAGTCTAGTACCCG TCCTTGTTTGACTCTTTGTCCTTAGTTGATATCACGCTCTTGCACGGTGA CCGCCTTGAATGAAGCAGGGTCCAGTATGGACGCTCGAGTTCAACCGACA CGGGACGCGCATGGCTACCGGCGGCGAAGATGGGAAAGTGGTAGTTTGGA ATATCGCGGTCTCGGCAGATGCAACGAAAGACAGTACAGAGGACGAACGT ATGAAGGGCGATACGGAGAGAAAAAATGAGGCCAAAAGCGGCGCCCAACC CTGCCAGGCGGACGAGGACGCCGGTTATGTCGCGGACAGCGAGAGGCGAC CAGGGACCGCAGTCAACACTGACGGTGTCGCGCCCAGAGATCTCCCCACA GAATCGTTGTCACCCGCATCTGGTGTGAGCGACGAGGCTGCGTCGCTTGG ACGAGGGAGCTCGGACTTGGGACACTCCGGCGGAAGTGAGAATGGGAGCA ATTCAACGGCCTTGGAGGTGAGGCCACTCGGCAACGAGGTCGTTAGTTTC CACGAGCGAGTAGGCACTGCTGCTTCCATTCGCCCCCACCATATTGTTGG GTCGATACGAGGACGCGCTAGGCAAGAAAGCGGTTGTACTTGCTCTTCTG TCTGTCTCTGTCTGTCTTTCTTTGTCATAGTCTTTTTCTAAGCATTACGA AGAAGCACACAACGCGCCGCGATAAAAGGAGGCACCAACCGTGTGGAGAG CAGTAAATAGTGAGGTATAGTAAGGTAGAATAACACAACGGTTAAGTTCT CTCGTAGCCTGCCAGTGTGTTGCTTCTCATCGGCGAGTTACGGCTGATGA AATTGGACATCCCGACAGGTGTTCGGATCGACCCCGGCCAGGGTTTTCAG AGGGCACGAAAGTGACGTGGTGGATCTCAGCTGGAGCCACTCGGATTTCT TGTGTTCCGCTAGCATTGACCACAAGGTTATGCTCTGGCATCCCCTCAGG TGTGCTCACCTTTCCCCTTGACTGGTCAATTGACTGGTAAAGGTGTAGAC CTAGACCCCTCGCCCGCCTATTGTGCAAACCCGACGTGAAGCTTAGGACC GTGGTGTTGCGTAGCTTGTCGAGTGAGAAGCAGCTATCTTTCGTATTACA ACTGGCCTCGTTGATGCGGAGATCACATTGACATTCGTCCTGGAATGACA TTCGTCGTGGAATACCCGAAGACCGAGATCACATTGTCGCGTACGGACGT GGACACGCTTGGAGTCAGTAAACCGTGCAATATGTCCTTCCCTCCCTAGT CTCTTCAACCCCGGTTCTTTGATGTCGGATGCTGTCATGCTGTAGGGGAG AGCGGCTCGGTACCTTCACCCACCCGGATTTCGTGACCTCGGTGCAGTTT CACCCTCTCGACGACCACGTCTTCCTCACGGGATGCTTCGACAAACGTCT TCGGTTGTGGACTGTAACAAACGGGAGGTGAGCCGGCGTCGTGGAGGATT CTGGGGGAGAGTCTAATCGTTAGCGTAAGCGTTATTCCTGGGAGAGGGTC AGGGCGCGCGCACATGGGAGACTGGCGCCCGTGACGGGGATTCATGAGAC CTGCGGATGGCGATCGGAATGGTTTGCCTGGGACTCAATCGTGTAGGGTT TAAGATCGGACACCGCTTGTCGCAGCTTAGATGGTGGGGCATTCTCTCTA GCGCTAGGTTGACGGGGTGTCTGATTACCAACCCCCCTGAAGGCGTGATC GTCGATCAGATTAGATCGGATCGGATGCTCACCTTCAATATTACGACGCT GTCCACGATTTGTTTTCACGCGCACAGGGTAGTCGACTGGGTGCAGTGCC AGGATATGATATCTTCCGCCAGATTCACCCCGGATGGCCAGCTTGCCGTG GCGGGGCTGTACGACGGCAGGGTCATCTTCCATCATACCACGGGCCTGCG GTACTACACGCAGGTGATGGCCCAGTTGTTGTTCTCTGTCCGGCGCCTTG TCTAACGCTAACACTTATCGAGAGCGGTCGGTCTTCATGCCTCAATATGA AAAATTATCATACCAGATTAGCAGCGTTCCCGCTCCAGCTTGGGTTCGCC TTGACTAGGCTACATGAACCTTGGGGCGCCCTTGGGCTTTGTGGTTTGTT GAAAATCCCCCCCCCCCCGTGAGATAAGAGGCCGCCTGAGACGGCGAGAT CGGGACACGTAATTGCGCCACCTTTAGATAAGTAGGAAGGAACAGGGCCA AAGACCGAGGGCAATCGATTATGCAGGGCCAATGCTCCGTTCCTATCCCC GAAGATCTAACATCTAAGGCACGCAAAAAATGAATACCCCCCCTTAAGTC ACCGCTTTGGCGCTTCTTTGCCTCCAAGATTTGCCGCCGGTGGCGAAAGT TTTTTGTTTTCGTTGAAGACGTAAAACAATACCGGTATTATAGTTCATCG GTCGGCGGAATTATTTGGATATCCTTTTCTTGAGCTAATCACGCTGCGCT GGTGGTTGGACGGTATCGCAGATCCACTGCCGGAATCGTTACGGCACCAA TCGCCGTGGCAAAAAAGTCACAGGACTGGCTTTTATCGAGACCTCTCTGC TCCACAACGTTGGATGTCATCCTTGCGGGGGCGTCGACCCCTCAGCCAAT GACCAGACGGGAGGGGCTGGGGAGGGGCTGGGAGAAGCGAGAGGGAAAAC GGCGTCTGGGACTAGGAAAGGCCTGGAAATCGGAATGGGGAAGGCCAACA ACATGTCGGCGCAGTACAGTCTGCTGTCGACCACGAATGACTCTCGGCTG CGGATCTACGATTTGGATAACTTCACGATGGTGCGTAGCTTCGGTATCTG GCAGTGTCAGTGGTTCTACCGTACCATGTCGGAGTCTCCCAGCGCTTCTT GTCGTGCGATGGACCGATAAAAGAGTGCTGAGCAGTGCCCTCAACAAGTC TTTCCCCCACCTGCTCATACACCGCTTCCGAGCTTTTGCCAATACGGGCG AACTACCGGACTTTGAGTGTTTGCCACGCATCTGCTACGTTAGGCGCACC CCCGCGACGTACCAGATATACCAGGAGACCAAACCTAGGGATTGTGACCC TCGGTCTTTGCCATCGAGACAGCGTCCGGTCAGGGGTATTAGCAGGTCTT CTGCTGTTGCCTGTTGCGTTTTCACTTCCGTGGCGTAACCGTAGCCATAG CCGTAACCGCTGTAGCACCTCCTGGGGACGCCGCCTTGCTCGTCCGCGCG CAGTCGAGCAAGTTCAAGGGTCTGGCGAACGATGGCATCCAGATCAAGGC GAGCTTCAGCGAGGATGGCATGTTTGTCGTCTCGGGTTCGGAAGACGGTC AGGTGAGAGCAAACTCGAGCAAACTCCGGCTCTATGTACTCTATCCAAGA TGCAAACGATTATTCATCGAGGGGGCGTTGCGGCTCAGACCATAACCGTT TTGTAGTGGCAGTCATCTCCTTGATTCGCGTGGGGATCGATCTGCGATAA TCCGCTCCACACACCCGGGACGCACAACCCCTTCAATTCATGCAGCCCCC CGTGGTCGAAATTGCGAAGACTATTTTCCTTCCACGACGGTGTCATACTG TATATATATATGTAAGCCTTATTGTGGACCAAAAAACTGAGACACGCTTC TGCAAACCGTCATGCCCACTCTTCCCATAGTGGATGTGGGAAAAGAGAGG CGTACAATAATTTGTCCATGGGGTTACTGTACCTGAATATACCTTGAGGA CTATTGGGTCAGTGCTGGTGGAATATCGGTAGTAAATACCATCGGTAAGC AATTGCGTGACATGATGAAATCGGGATTGGCCCGATGGCGGTTGACGGTA GAGATGGGTACCGTCGCGGAACACGAGAGGATCGAGAGGATCCCGGGAGT ACGCACCAGATTCAGCCTGGGTTGGGAGAATGAGCAGGCTGACGCGGGAC GGGACTGCCGAACCCGTCTCGCGAGGCTAAATTTTCAGGCGCGGACGGGG ACAGAGAAAAAAACATTTTCCCTGTTCAGCTGACCACAAGCAGAAGGCAA CCCAATCCGGTTAATCCTTACTCTGCTATATGTGATGACGTCATGACCGT ATATATACATGTGTGTGTTCATGTATATAATTTATTTCCCCCTTGTCGCG CCTTTACCTTCGCCTTAGAGTACACTTCTTCTTGCCCCCATGGAACCGGA GACCACTTAACAAGTGGAAAATTTTGGTTAGGAGCACGACCTTTACGGGA GAATGCGCTTGCCACTGTCTAAAAGTTAAGTTAAGGCCAATGGTGCTACT TGCACCGTGTTTCGCGCGTGCGCAAAACCTTCATCTGTCTTCTAGGTGTA CTTGTGGAACACCAGTCGCCAACAAACAAATGCTGTTTCTACAGGAGGTG CCCCAAACGATCGTTTCAACGGAGGCAGCGGCGGTGGCAGCTCGGCGGTT CCCTCTTGCTCCACAGTCACCGTCGCCGCCTCAGACGCCGGGGCCACCTC GACGTCGGGACGATTCAAGTCGAGAATCTCGTCGTCGTTCAGCGTCCAGT GCTCCACGCGGCCGAAGGTCGCCACCGTGGCTACCTTCCTTCCAACCAGC GCGTTCGACGCTGTGCTGGGGAGCGGCGACATAATTTCCAACGATTCCCC GGACCGGCTTCTGCGAGGCGAGGGTGCAAAGGGGACAGAGAGGCGGCCGC AAGTGACAAGGCCTTCTTCATATCGTCGTGTGCCGTCGATGCCGCTGTCG AGAGGTACAGATGGACCGAGACGGCGCCGATGGACCTTCGGTGGACACGC GCGATTCCGGGGGGAAAGTGGAGAGAGTTACGGCGACAAGGCGAGGCATC ATCTGAGTCTGGCGCGTTAAATCCGTCTCTTTTTTCCTTGTGGTACGCTC GGAATGGATCGCGGAGGCGGCGGGTTTTGTTGCGGTACGACGAAGCTTTA TCGCTCCTCGCCAAGCAGTTTGTATCACCACCGTCGACTCACCCTTACCC GAAACCGTTCTGCACGCTCAAAATACAGGTGCTGTTTACGGGGAAGACTA AGAGCGGCCCAACCCCGCTGTCGCAACCAGTCGTTAGGGCTCAGACGAGG GCCCTGAACAAAGGCCGCCTGCCAGACGCATCATCGACCTCACGGTCGTC TCTCGATTCACGGGGCAAACCCACGGCGTTGGATGAGGAGTCGCAGGTAC GGTCGCAGGCGATGAAACCGCTCGCGGAAGCGCCGGCGTCGGAAGCAAAG CTTCTCGAAGAGTGGCGAAAATCAGGCCGGCTTTCTGTAGGGAGCAAGAT AAGGGGCATTGTGTCGGCAGATTACAGCGGCGATGTAAAGGTGTTTCTGG GTTTTGTGGACGAATTAGATGGCGCCGGGTCATAAAAGCGGCTCTCAGTC TTTTGTGTGCAGTGGGGCCCACGCATTCGTGGGGTTGGACGTTTGAAGTT CTTCCAAGGGTCATGATTTCGCACCACTCAGTCAAGAATGAGGACATAGA CACACTTCTTTGTCTATTGGCGGTTGAGATCGGTGCCTGGGCGTTTGGAA TCCTCTTTCGCCAACGAACTGTAGGAGCTCAATATCTGGCGGGTGGCCGA TGATACTCGCACCTCGCACTTTTGAGTATTGATGACGAGGGCGGGTGCCG CTTGTTTTTGTTTTTTTTTGCTTACGCGGAATTTTGTTTTGAGGTTTTCC CAAGACGCGTCCGTAAAAGCGGAGTCTTCATTGGGCCCGTAGGATTTTGA CTAATTCCCGACAGGGCCGTCTTTGTATCTCGAGAGGCTCAAATCGGTAA GGTAGGGTGTTAGACTCTTATGTGAAGTGCCTTGGACGCCTCTCTCGTAA TTGTACTGACGCAGACGCAGATCCACTTCAACCATGATGCTGTAGCGATG GCTAGTAATATTTGTGATAACCTACAGTAGCAGTGCTTGGTCGCCTTCGC CGTCGTTTGAAATTACTGTACTGACTGTATCACGTTACCTTTGATTTTGA AAAGCCCGTGTGGATGTGGAAGAAGGGGCGTAGGGGTCTCGCAATGTGTG ATTGGCCGACTCTTGTTTACAGGTGTAGGCTTGGAATTATTTGCATGCCT CTGGGGTCGATGGTAGATGGCACACACACACATATATATATACACACGAA GTAAATATTTCCAGAGTACTAAAGGGTATTGATATTAGTCTAATATAGTA GAAGAAGTAACATAATCCTGCGAGGTGCTATGTATTCGGGGGAGGATTTA ATCGTCTGCTCTTTACCGTGCAGTATTTCGCTACTAACGATTTACAGCAA TTTTCCTCCTTTAGAGGAGAGAGAGCAGCTCCCTGTCAGCGGCGGTTGGC GGGCACCTCTGTCGATAACCAGTAGCAATATTGAAGATTGAAGTTGGTAT TATGGGCAGAACTGTAGGGTTGAGGATCGATCGTCGGAGCCCTTAGTGTT ATGTTGGTATTAAAATTTGAATTGAATTCAATCCCAATCAATCGATGTAC GGCAGCCTACTATCTACTGTACTACTTGCTGGAGATGAATAACGGGGAGG GGGGCTGCCATAATACGCATTACGATCGTTTGATTAGAAAGAGATGTGGG AATAATAGCTCTATTTAATAGAGTCTAGGGCAAACATTTTTGTTTTCAGC ATGAATCGATTTTTCCGTATAAATATTCTATATGCTACTAAACGTATTGG AGAGTACCTTGAACGTTTTTCTCCTTTCCGGATGGTGTATTTTTTCTACC TTGTGACCACGGGCTGGATTTTGACTTCAATTCAATTCAATACGGTATAT ACTAAAAATCGTCTTTTAAATAAAAATCGAGAGCCTAGCATCTAATAATA TTATTATTATTAATAGCAGTTAATAGT
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Coding sequence (CDS) from alignment at H-elongata_contig5464:2..8378-

>mRNA_H-elongata_contig5464.12852.1 ID=mRNA_H-elongata_contig5464.12852.1|Name=mRNA_H-elongata_contig5464.12852.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5628bp|location=Sequence derived from alignment at H-elongata_contig5464:2..8378- (Himanthalia elongata Himel1 dioecious)
ATGCTAAAGCTGGAGGATTGGCGATCGATTTCTGTGTCAAGACTGCAAGT
CAAACCACGGCTGGAGCAGGAGCTAGATCCGGACTTCGCGGAGCCTGCGG
CGACTGGCCCGTCCGCGAACGCAGTCGATGGCCACAGCATGAGATTGGAC
ATCGTCGACGACCTGGTGACACACGGCGAAGATATGTCTACCGCATCAGG
AACAACGGTGACGGAAGGGGGGTGGGACAGCAGCGGCAACGGCTTAGAGG
AGGTGGGCGATCCGGTGCAAGGGGTCTCGGTGGCTTCGGGGAGGAAGACC
GACAAGGCAGGGAAAGAAAAAAATGGCATAAAAATGGCGGCCCCAGCTAT
GAATGCGGCTGTGTCACCGATCAAAAATTCATTGCTTTGGGTTTTGGAAA
ACGCTCGAAGATGCTAAAGCTGGAGGATTGGCGATCGATTTCTGTGTCAA
GACTGCAAGTCAAACCACGGCTGGAGCAGGAGCTAGATCCGGACTTCGCG
GAGCCTGCGGCGACTGGCCCGTCCGCGAACGCAGTCGATGGCCACAGCAT
GAGATTGGACATCGTCGACGACCTGGTGACACACGGCGAAGATATGTCTA
CCGCATCAGGAACAACGGTGACGGAAGGGGGGTGGGACAGCAGCGGCAAC
GGCTTAGAGGAGGTGGGCGATCCGGTGCAAGGGGTCTCGGTGGCTTCGGG
GAGGAAGACCGACAAGGCAGGGAAAGAAAAAAATGGCATAAAAATGGCGG
CCCCAGCTATGAATGCGGCTGTGTCACCGATCAAAAATTCATTGCTTTGG
GTTTTGGAAAACGCTCGAAGCCGAACGCGCCAACGACAAGCCAAAACCAA
GCTCAAGAAGGGCGCAGGCAAGCGGAGACCGGACGGCGACCCCAATGGCG
TCACAAACGAGATCGACTCGAGCGTGACTTCAACCGACGGGATCCCTGCG
TTGGAAGAGACGGGAGACGCGGTCGCGGAGACTTTCGCGGGCGGGCAAGA
CGCTAGAATGGAATCTTATTTCCTGAGAAGGCGCACTAAGACTGTGGCGA
AGAGCGAGGCCACGAACGGTCCGCCGGAGATCAAAATGCATCGCCACGGA
AGGGGCGCGGGGAAGGTGGACGGTTGGCGCTCGACGTACATGGTCCAATG
CCTTCGGCACCACAAGCCGAACGCGCCAACGACAAGCCAAAACCAAGCTC
AAGAAGGGCGCAGGCAAGCGGAGACCGGACGGCGACCCCAATGGCGTCAC
AAACGAGATCGACTCGAGCGTGACTTCAACCGACGGGATCCCTGCGTTGG
AAGAGACGGGAGACGCGGTCGCGGAGACTTTCGCGGGCGGGCAAGACGCT
AGAATGGAATCTTATTTCCTGAGAAGGCGCACTAAGACTGTGGCGAAGAG
CGAGGCCACGAACGGTCCGCCGGAGATCAAAATGCATCGCCACGGAAGGG
GCGCGGGGAAGGTGGACGGTTGGCGCTCGACGTACATGGTCCAATGCCTT
CGGCACCACAAGGGTCCAGTATGGACGCTCGAGTTCAACCGACACGGGAC
GCGCATGGCTACCGGCGGCGAAGATGGGAAAGTGGTAGTTTGGAATATCG
CGGTCTCGGCAGATGCAACGAAAGACAGTACAGAGGACGAACGTATGAAG
GGCGATACGGAGAGAAAAAATGAGGCCAAAAGCGGCGCCCAACCCTGCCA
GGCGGACGAGGACGCCGGTTATGTCGCGGACAGCGAGAGGCGACCAGGGA
CCGCAGTCAACACTGACGGTGTCGCGCCCAGAGATCTCCCCACAGAATCG
TTGTCACCCGCATCTGGTGTGAGCGACGAGGCTGCGTCGCTTGGACGAGG
GAGCTCGGACTTGGGACACTCCGGCGGAAGTGAGAATGGGAGCAATTCAA
CGGCCTTGGAGGGTCCAGTATGGACGCTCGAGTTCAACCGACACGGGACG
CGCATGGCTACCGGCGGCGAAGATGGGAAAGTGGTAGTTTGGAATATCGC
GGTCTCGGCAGATGCAACGAAAGACAGTACAGAGGACGAACGTATGAAGG
GCGATACGGAGAGAAAAAATGAGGCCAAAAGCGGCGCCCAACCCTGCCAG
GCGGACGAGGACGCCGGTTATGTCGCGGACAGCGAGAGGCGACCAGGGAC
CGCAGTCAACACTGACGGTGTCGCGCCCAGAGATCTCCCCACAGAATCGT
TGTCACCCGCATCTGGTGTGAGCGACGAGGCTGCGTCGCTTGGACGAGGG
AGCTCGGACTTGGGACACTCCGGCGGAAGTGAGAATGGGAGCAATTCAAC
GGCCTTGGAGGTGTTCGGATCGACCCCGGCCAGGGTTTTCAGAGGGCACG
AAAGTGACGTGGTGGATCTCAGCTGGAGCCACTCGGATTTCTTGTGTTCC
GCTAGCATTGACCACAAGGTTATGCTCTGGCATCCCCTCAGGTGTTCGGA
TCGACCCCGGCCAGGGTTTTCAGAGGGCACGAAAGTGACGTGGTGGATCT
CAGCTGGAGCCACTCGGATTTCTTGTGTTCCGCTAGCATTGACCACAAGG
TTATGCTCTGGCATCCCCTCAGGGGAGAGCGGCTCGGTACCTTCACCCAC
CCGGATTTCGTGACCTCGGTGCAGTTTCACCCTCTCGACGACCACGTCTT
CCTCACGGGATGCTTCGACAAACGTCTTCGGTTGTGGACTGTAACAAACG
GGAGGGGAGAGCGGCTCGGTACCTTCACCCACCCGGATTTCGTGACCTCG
GTGCAGTTTCACCCTCTCGACGACCACGTCTTCCTCACGGGATGCTTCGA
CAAACGTCTTCGGTTGTGGACTGTAACAAACGGGAGGGTAGTCGACTGGG
TGCAGTGCCAGGATATGATATCTTCCGCCAGATTCACCCCGGATGGCCAG
CTTGCCGTGGCGGGGCTGTACGACGGCAGGGTCATCTTCCATCATACCAC
GGGCCTGCGGTACTACACGCAGGGTAGTCGACTGGGTGCAGTGCCAGGAT
ATGATATCTTCCGCCAGATTCACCCCGGATGGCCAGCTTGCCGTGGCGGG
GCTGTACGACGGCAGGGTCATCTTCCATCATACCACGGGCCTGCGGTACT
ACACGCAGATCCACTGCCGGAATCGTTACGGCACCAATCGCCGTGGCAAA
AAAGTCACAGGACTGGCTTTTATCGAGACCTCTCTGCTCCACAACGTTGG
ATGTCATCCTTGCGGGGGCGTCGACCCCTCAGCCAATGACCAGACGGGAG
GGGCTGGGGAGGGGCTGGGAGAAGCGAGAGGGAAAACGGCGTCTGGGACT
AGGAAAGGCCTGGAAATCGGAATGGGGAAGGCCAACAACATGTCGGCGCA
GTACAGTCTGCTGTCGACCACGAATGACTCTCGGCTGCGGATCTACGATT
TGGATAACTTCACGATGATCCACTGCCGGAATCGTTACGGCACCAATCGC
CGTGGCAAAAAAGTCACAGGACTGGCTTTTATCGAGACCTCTCTGCTCCA
CAACGTTGGATGTCATCCTTGCGGGGGCGTCGACCCCTCAGCCAATGACC
AGACGGGAGGGGCTGGGGAGGGGCTGGGAGAAGCGAGAGGGAAAACGGCG
TCTGGGACTAGGAAAGGCCTGGAAATCGGAATGGGGAAGGCCAACAACAT
GTCGGCGCAGTACAGTCTGCTGTCGACCACGAATGACTCTCGGCTGCGGA
TCTACGATTTGGATAACTTCACGATGTCGAGCAAGTTCAAGGGTCTGGCG
AACGATGGCATCCAGATCAAGGCGAGCTTCAGCGAGGATGGCATGTTTGT
CGTCTCGGGTTCGGAAGACGGTCAGTCGAGCAAGTTCAAGGGTCTGGCGA
ACGATGGCATCCAGATCAAGGCGAGCTTCAGCGAGGATGGCATGTTTGTC
GTCTCGGGTTCGGAAGACGGTCAGGTGTACTTGTGGAACACCAGTCGCCA
ACAAACAAATGCTGTTTCTACAGGAGGTGCCCCAAACGATCGTTTCAACG
GAGGCAGCGGCGGTGGCAGCTCGGCGGTTCCCTCTTGCTCCACAGTCACC
GTCGCCGCCTCAGACGCCGGGGCCACCTCGACGTCGGGACGATTCAAGTC
GAGAATCTCGTCGTCGTTCAGCGTCCAGTGCTCCACGCGGCCGAAGGTCG
CCACCGTGGCTACCTTCCTTCCAACCAGCGCGTTCGACGCTGTGCTGGGG
AGCGGCGACATAATTTCCAACGATTCCCCGGACCGGCTTCTGCGAGGCGA
GGGTGCAAAGGGGACAGAGAGGCGGCCGCAAGTGACAAGGCCTTCTTCAT
ATCGTCGTGTGCCGTCGATGCCGCTGTCGAGAGGTACAGATGGACCGAGA
CGGCGCCGATGGACCTTCGGTGGACACGCGCGATTCCGGGGGGAAAGTGG
AGAGAGTTACGGCGACAAGGTGTACTTGTGGAACACCAGTCGCCAACAAA
CAAATGCTGTTTCTACAGGAGGTGCCCCAAACGATCGTTTCAACGGAGGC
AGCGGCGGTGGCAGCTCGGCGGTTCCCTCTTGCTCCACAGTCACCGTCGC
CGCCTCAGACGCCGGGGCCACCTCGACGTCGGGACGATTCAAGTCGAGAA
TCTCGTCGTCGTTCAGCGTCCAGTGCTCCACGCGGCCGAAGGTCGCCACC
GTGGCTACCTTCCTTCCAACCAGCGCGTTCGACGCTGTGCTGGGGAGCGG
CGACATAATTTCCAACGATTCCCCGGACCGGCTTCTGCGAGGCGAGGGTG
CAAAGGGGACAGAGAGGCGGCCGCAAGTGACAAGGCCTTCTTCATATCGT
CGTGTGCCGTCGATGCCGCTGTCGAGAGGTACAGATGGACCGAGACGGCG
CCGATGGACCTTCGGTGGACACGCGCGATTCCGGGGGGAAAGTGGAGAGA
GTTACGGCGACAAGGTGCTGTTTACGGGGAAGACTAAGAGCGGCCCAACC
CCGCTGTCGCAACCAGTCGTTAGGGCTCAGACGAGGGCCCTGAACAAAGG
CCGCCTGCCAGACGCATCATCGACCTCACGGTCGTCTCTCGATTCACGGG
GCAAACCCACGGCGTTGGATGAGGAGTCGCAGGTACGGTCGCAGGCGATG
AAACCGCTCGCGGAAGCGCCGGCGTCGGAAGCAAAGCTTCTCGAAGAGTG
GCGAAAATCAGGCCGGCTTTCTGTAGGGAGCAAGATAAGGGGCATTGTGT
CGGCAGATTACAGCGGCGATGTAAAGGTGTTTCTGGGTTTTGTGGACGAA
TTAGATGGCGCCGGGTCATAAGTGCTGTTTACGGGGAAGACTAAGAGCGG
CCCAACCCCGCTGTCGCAACCAGTCGTTAGGGCTCAGACGAGGGCCCTGA
ACAAAGGCCGCCTGCCAGACGCATCATCGACCTCACGGTCGTCTCTCGAT
TCACGGGGCAAACCCACGGCGTTGGATGAGGAGTCGCAGGTACGGTCGCA
GGCGATGAAACCGCTCGCGGAAGCGCCGGCGTCGGAAGCAAAGCTTCTCG
AAGAGTGGCGAAAATCAGGCCGGCTTTCTGTAGGGAGCAAGATAAGGGGC
ATTGTGTCGGCAGATTACAGCGGCGATGTAAAGGTGTTTCTGGGTTTTGT
GGACGAATTAGATGGCGCCGGGTCATAA
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