prot_H-elongata_contig54610.12849.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54610.12849.1
Unique Nameprot_H-elongata_contig54610.12849.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length437
Homology
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BLAST of mRNA_H-elongata_contig54610.12849.1 vs. uniprot
Match: A0A6H5KYI2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYI2_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 7.460e-72
Identity = 169/409 (41.32%), Postives = 230/409 (56.23%), Query Frame = 0 
Query:   69 YFQPFGISISV-CDGITTSSGDEDKDKKPRMQILSALFHLDSTNIMVKS--IYGTLSLITLLGALKNTFDKSNVDILDFVHFHAAYECSFHEGNRFMSFFVRVFAPPSRSSGQLLDEEATIVEKIEGGL-----LVEVQLREGDRLHFSALYREMMTNFMRCQEDVTITGTLRYRPKPSPGKGEGLMIEPSSFPHPSKYGTR---QRFKSTDV------------PESPLSNEPMDEDMVEDVVKLAEMLESGLLDVQADAATAIAGLSGEAEFREQLCHPIAKTAAVTLCRAAARLLVKTEYRPARRQAAVTVANLSSSPELCLLLLDPDPSTTATKRG---------------LVEALVTLAIQQSKDA----KEEEIGTRRECMRALVYIAKSRSANNTVRQVLLL 435
            +F PFGI+ +    G+++  G+ +    P +  L + F L+ TN++V S  +   LS+ +LL AL+     + VD+LDF   H   ECS+H GNRF+S F+RVF  P R+SGQL D  +      + G      LVE QLREGDRLHFSAL+RE++  FM  QE V + GT RY+P+  P  GEGL +E  +   PS+   R   +R ++T              P+   S+  +D DM++DVV LA+ML    LDVQADAA A+AGL+ + +  EQL    A  AA  +  AAARLLV+T +RPARRQAAV VANL+ +P+L   LL  D                        LVE+LV L++ +   +     EEEIG RRECMRALV +A+SR   +     LLL
Sbjct:  157 FFAPFGIAGNAHSSGLSSYDGELEDSDTPCVATLPSTFRLERTNLVVTSPLMEQLLSVDSLLDALRAALTDAGVDVLDFKPAHCVLECSYHVGNRFLSLFIRVFKAPDRASGQLFDNSSVGNNNNDDGAEQTPYLVEAQLREGDRLHFSALFREILRAFMN-QEGVNLVGTFRYKPRTYPATGEGLALEQVNMA-PSRNSIRLLAERGEATKTGGSLPVPASMARPQVSSSSPELDSDMMDDVVLLADMLSGSYLDVQADAAAAVAGLTTDVKLLEQLSRGAAANAANAIAHAAARLLVETRHRPARRQAAVAVANLTKTPQLRAALLASDXXXXXXXXXXXXXXXXXXXXXXXXLVESLVVLSMGRVDGSAARKSEEEIGMRRECMRALVGLAESRVVRDMPAMRLLL 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54610.12849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYI2_9PHAE7.460e-7241.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 276..434
e-value: 1.9E-7
score: 32.6
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 281..430

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54610contigH-elongata_contig54610:685..3832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54610.12849.1mRNA_H-elongata_contig54610.12849.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54610 685..3832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54610.12849.1 ID=prot_H-elongata_contig54610.12849.1|Name=mRNA_H-elongata_contig54610.12849.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=437bp
DEISSNRGGYLAKMKYTMGPSTIHSQPWSVQRSDLAVEKSKLLEPKREQR
IHPILDMGEPIRVTEEEEYFQPFGISISVCDGITTSSGDEDKDKKPRMQI
LSALFHLDSTNIMVKSIYGTLSLITLLGALKNTFDKSNVDILDFVHFHAA
YECSFHEGNRFMSFFVRVFAPPSRSSGQLLDEEATIVEKIEGGLLVEVQL
REGDRLHFSALYREMMTNFMRCQEDVTITGTLRYRPKPSPGKGEGLMIEP
SSFPHPSKYGTRQRFKSTDVPESPLSNEPMDEDMVEDVVKLAEMLESGLL
DVQADAATAIAGLSGEAEFREQLCHPIAKTAAVTLCRAAARLLVKTEYRP
ARRQAAVTVANLSSSPELCLLLLDPDPSTTATKRGLVEALVTLAIQQSKD
AKEEEIGTRRECMRALVYIAKSRSANNTVRQVLLLH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold