prot_H-elongata_contig116299.1284.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116299.1284.1
Unique Nameprot_H-elongata_contig116299.1284.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: D7FTX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX6_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 1.590e-26
Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    4 RFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDDR 67
            RFET +NH VELGASWL+L PVRA+ +  GGIQ  FQLAII+SGNLSFLNYLTILPFIWCFDDR
Sbjct:  248 RFETAMNHIVELGASWLLLAPVRALSLLAGGIQTGFQLAIIISGNLSFLNYLTILPFIWCFDDR 311          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: UPI0014258091 (lipase maturation factor 1-like isoform X1 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014258091)

HSP 1 Score: 89.0 bits (219), Expect = 4.360e-19
Identity = 40/64 (62.50%), Postives = 50/64 (78.12%), Query Frame = 0
Query:    4 RFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDDR 67
            +FET  NH +ELGA WL+++P R   M GG IQ LFQ+ +I+SGNLSFLN+LTILP I CFDD+
Sbjct:  269 QFETASNHFIELGAPWLLIIPWRPTLMIGGTIQVLFQVVLILSGNLSFLNWLTILPSICCFDDK 332          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A8J1XFI2_OWEFU (Lipase maturation factor n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XFI2_OWEFU)

HSP 1 Score: 86.3 bits (212), Expect = 3.860e-18
Identity = 42/67 (62.69%), Postives = 52/67 (77.61%), Query Frame = 0
Query:    1 VLGRFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDDR 67
            +  RFET+ NH VEL A W +L+P R + +AGG IQ LFQ+ II+SGNLSFLN+LTILP I CFDD+
Sbjct:  264 IFHRFETLTNHFVELIAPWFILLPFRRLRIAGGVIQILFQVLIIISGNLSFLNWLTILPAIACFDDK 330          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A8B8EBQ5_CRAVI (Lipase maturation factor n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EBQ5_CRAVI)

HSP 1 Score: 82.4 bits (202), Expect = 8.730e-17
Identity = 39/66 (59.09%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 VLGRFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            +  +FET+ NH VEL A W +L P R +CM GG IQ LFQ+ +I+SGNLSFLN+LTI+P + CFDD
Sbjct:  257 IFHKFETLTNHFVELVAPWFLLGP-RRLCMIGGAIQILFQVVLIISGNLSFLNWLTIVPSLACFDD 321          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A7J7K8K0_BUGNE (Lipase maturation factor n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K8K0_BUGNE)

HSP 1 Score: 75.9 bits (185), Expect = 1.790e-16
Identity = 37/62 (59.68%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    6 ETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDDR 67
            ET  NH VEL A  ++++P+R V + GG IQ LFQ+ +I SGNLSFLN+LTILP I CFDD+
Sbjct:    2 ETAGNHFVELIAPLMLIIPLRKVQIVGGSIQILFQVILICSGNLSFLNWLTILPCIACFDDK 63          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A0G4GCT9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GCT9_VITBC)

HSP 1 Score: 81.3 bits (199), Expect = 2.250e-16
Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    5 FETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            FET+VNH +E   SW  L+P+R   +  GG Q +FQ+ +I+SGNLSFLN+LTILP I+CFDD
Sbjct:  261 FETLVNHIIECALSWNTLIPLRGCRLIAGGSQVIFQVVLILSGNLSFLNWLTILPSIFCFDD 322          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A7S2H477_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2H477_9DINO)

HSP 1 Score: 75.5 bits (184), Expect = 5.090e-16
Identity = 33/60 (55.00%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    7 TVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            T  NH +EL A WL+L+P R    A G +  +FQ+A+I++GNLSFLN+LTI+P +WCFDD
Sbjct:   17 TACNHVIELFAPWLVLLPWRPALAAFGALHIVFQVALILTGNLSFLNWLTIVPGLWCFDD 76          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A812MV54_9DINO (Lmf1 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812MV54_9DINO)

HSP 1 Score: 80.1 bits (196), Expect = 5.730e-16
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    2 LGRFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            L  + T  NH +EL   WL+L P RA   A G +  LFQLA+I++GNLSFLN+LTI+P +WCFDD
Sbjct:  375 LHLYATASNHVIELVMPWLLLCPCRATLAAFGAVHILFQLALILTGNLSFLNWLTIIPGLWCFDD 439          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A7S0LZW9_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZW9_9CRYP)

HSP 1 Score: 76.3 bits (186), Expect = 7.850e-16
Identity = 38/62 (61.29%), Postives = 46/62 (74.19%), Query Frame = 0
Query:    5 FETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            F T+VNH VEL A +L+L+P R   + GG IQ LFQ  +I+SGNLSFLN+LTI P I CFDD
Sbjct:   66 FSTLVNHLVELPAPFLLLLPFRRPRIVGGVIQVLFQAVLILSGNLSFLNWLTIAPAIACFDD 127          
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Match: A0A812W742_SYMPI (LMF1 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812W742_SYMPI)

HSP 1 Score: 79.3 bits (194), Expect = 1.060e-15
Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    2 LGRFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLSFLNYLTILPFIWCFDD 66
            L  + T  NH +EL   WL+LVP RA   A G +  LFQL +I++GNLSFLN+LTI+P +WCFDD
Sbjct:  271 LHLYATASNHIIELVMPWLLLVPCRAAPAAFGAVHILFQLTLILTGNLSFLNWLTIIPGLWCFDD 335          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116299.1284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTX6_ECTSI1.590e-2679.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00142580914.360e-1962.50lipase maturation factor 1-like isoform X1 n=2 Tax... [more]
A0A8J1XFI2_OWEFU3.860e-1862.69Lipase maturation factor n=1 Tax=Owenia fusiformis... [more]
A0A8B8EBQ5_CRAVI8.730e-1759.09Lipase maturation factor n=1 Tax=Crassostrea virgi... [more]
A0A7J7K8K0_BUGNE1.790e-1659.68Lipase maturation factor n=1 Tax=Bugula neritina T... [more]
A0A0G4GCT9_VITBC2.250e-1658.06Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A7S2H477_9DINO5.090e-1655.00Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A812MV54_9DINO5.730e-1655.38Lmf1 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A7S0LZW9_9CRYP7.850e-1661.29Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A812W742_SYMPI1.060e-1555.38LMF1 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009613Lipase maturation factorPFAMPF06762LMF1coord: 3..66
e-value: 2.4E-21
score: 76.4
IPR009613Lipase maturation factorPANTHERPTHR14463Lipase maturation factorcoord: 2..67
NoneNo IPR availablePANTHERPTHR14463:SF10LIPASE MATURATION FACTOR 1coord: 2..67
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..40
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..67
NoneNo IPR availableTMHMMTMhelixcoord: 42..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116299contigH-elongata_contig116299:141..344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116299.1284.1mRNA_H-elongata_contig116299.1284.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116299 141..344 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116299.1284.1 ID=prot_H-elongata_contig116299.1284.1|Name=mRNA_H-elongata_contig116299.1284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
VLGRFETVVNHAVELGASWLMLVPVRAVCMAGGGIQALFQLAIIMSGNLS
FLNYLTILPFIWCFDDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009613LMF