mRNA_H-elongata_contig5456.12842.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: A0A6H5KNS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNS5_9PHAE) HSP 1 Score: 575 bits (1482), Expect = 9.200e-191 Identity = 329/539 (61.04%), Postives = 386/539 (71.61%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSL-HLSLSVAIAVAMTSGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSGI------------VTQEDLYALEVAAKAARAHGSTVPKV---------HILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQXXXXXXXXXXXXXXXXASVTAAADKAQASFSAFKALVAEVGEAEMKARDAKISKD 1551
SLDNVCAEPNASD RYL GLHKTYARH DFPRT PKDMR+CFWVKHYAGKVKYTIGGWVERNMDSIPQSF DTL +ST + Q+ +S +S + A + S L +PTVAK FLASM+NLN+TLLGTTCNFARCIKPNAAME GVY+N+YVV+QLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG+N AEAEKLF+GEPET+LIASILWAFEVPSEAFRLGKTRVFF+AGQISTLQKILNET AEK PWIF+RLQEALANRQKAK ++ ++ + DDE+ + V++EDL L +AAK ARA GST P+V LL A + D++GTYA G K+RV+AASE TLADI+ ++ K ELE IK +G DEA ALR LED + +L A FKEVK L GAQEAA KCQVQKTEE+ +AA+ KA+ + QAR V AK+AAQ SV AA +KA ASFSAFK LV + E +A++AK++++
Sbjct: 178 SLDNVCAEPNASDARYLEGLHKTYARHMDFPRTQPKDMRDCFWVKHYAGKVKYTIGGWVERNMDSIPQSFNDTLATSTLKVVQEAVASYGQVSPAPASSGRRGSSLKKPTVAKSFLASMQNLNDTLLGTTCNFARCIKPNAAMECGVYDNKYVVEQLQCLGILQTCEVLKVGMPTRVTYTDLKEVLGSNAAEAEKLFAGEPETSLIASILWAFEVPSEAFRLGKTRVFFRAGQISTLQKILNETPAEKSPWIFERLQEALANRQKAKASSGEAKAALEKVEKFMAEARAATRGML----EPDSDDEDGPNVSRRPSMIRAPAAVSEEDLAPLVLAAKKARAAGSTAPQVWKGDVPPQVRQLLGAVDEDKIGTYAIGAKDRVVAASETTLADIDDASTKASELEVDIKTIKGGDEATALRRLEDGLNRLKASFKEVKALAQGAQEAADKCQVQKTEEMASAATTKAAVFDGQARVVLIGAKTAAQASQLQKQSLEKAKAMVGSVAAAGEKAAASFSAFKVLVKAANDEEEEAKEAKMAEE 712
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: D7G4Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q7_ECTSI) HSP 1 Score: 588 bits (1517), Expect = 9.470e-190 Identity = 335/528 (63.45%), Postives = 385/528 (72.92%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSL-HLSLSVAIAVAMTSGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSGI------------VTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQXXXXXXXXXXXXXXXXASVTAAADKAQASFSAFKALVAEVGEAEMKARDAKIS 1545
SLDNVCAEPN SD RYL+GLHKTYARH DFPRT PKDMR+CFWVKHYAGKVKYTIGGWVERNMDSIPQSF DTL +ST + Q+ +S +S + A + S L +PTVAK FLASMRNLNETLLGTTCNFARCIKPNAAM+ GVY+N+YVV+QLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG+N AEAEKLF+GEPET+LIASILWAFEVPSEAFRLGKTRVFF+AGQISTLQKILNET EKGPWIF+RLQEALANRQKAK +A ++ + DDE+ + V++EDL L +AAK ARA GST P+V LL A + D++GTYA G KERV+AASE TLADI+ +A K ELEA IK +G DEA ALR LED + +L A FKEVK L GAQEAA KCQVQKTEE+ +AA+AKA+ + QAR V AK+AAQ SV AA KA ASFSAFK LV + E KA++AK++
Sbjct: 527 SLDNVCAEPNPSDARYLDGLHKTYARHMDFPRTQPKDMRDCFWVKHYAGKVKYTIGGWVERNMDSIPQSFNDTLATSTLKVVQESVASYGQVSPAPASSGRRGSSLKKPTVAKSFLASMRNLNETLLGTTCNFARCIKPNAAMKCGVYDNKYVVEQLQCLGILQTCEVLKVGMPTRVTYTDLKEVLGSNAAEAEKLFAGEPETSLIASILWAFEVPSEAFRLGKTRVFFRAGQISTLQKILNETPPEKGPWIFERLQEALANRQKAKASAREAKAALEKVEKSMAEARAATSGML----EPDSDDEDGPDVSRRSSMIGAPAAVSEEDLAPLVLAAKKARAAGSTAPQVQQLLGAVDEDKIGTYAIGVKERVVAASETTLADIDDAATKASELEADIKTVKGGDEATALRRLEDGLNRLKASFKEVKALAQGAQEAADKCQVQKTEEMASAATAKAAVFDGQARVVLIGAKTAAQASQLQKQSFEKAKAAVGSVAAAGQKAAASFSAFKVLVKAANDEEEKAKEAKMA 1050
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: D8LHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ0_ECTSI) HSP 1 Score: 494 bits (1272), Expect = 2.260e-154 Identity = 300/519 (57.80%), Postives = 361/519 (69.56%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMTSG----LVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSG---------IVTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQXXXXXXXXXXXXXXXXASVTAAADKAQASFSAFKALVAEVGEAE 1518
SLDN+CAEPN SD RYL+GLHK Y RHQDFP+T+ K+MRE FWVKHYAGKVKYT+ GWVERNMD +P+SF TL +S ++ Q+ S + + T+ LV+ TV K FLASM++LN TLL TTCNF RCIKPNAAM+ GV++NRYVVDQLQCLGILQTCEVLKVGMPTRVTY LKEVLG+ AEAEKLF+GEPETALIA+ILWAFEVP E FRLG+TRVFF+AGQI TLQKILNET EKGPWIF RLQEALANR KAK A A XXXXXXXXXXXXXXXX + N+E D+E++ G +++ +D Y LE AAK AR G+ VP+V ++A D VGT+A G ER+LAASE L INAS+ EELE + ++G D A +R + D + +L +F+E K L G++EAAAKCQV+K +E T A KAS V +QA AVT A+ A VTAA ++A A+FSAFK + E AE
Sbjct: 519 SLDNICAEPNPSDARYLDGLHKAYLRHQDFPQTSQKNMRENFWVKHYAGKVKYTVHGWVERNMDRVPESFGTTLATSKHQVVQEATSKYRQAPASTATTPKTARARKTLVKSTVGKAFLASMQDLNRTLLSTTCNFIRCIKPNAAMQCGVFSNRYVVDQLQCLGILQTCEVLKVGMPTRVTYRELKEVLGDKAAEAEKLFAGEPETALIAAILWAFEVPLEVFRLGRTRVFFRAGQICTLQKILNETGPEKGPWIFGRLQEALANRHKAK-ATADXXXXXXXXXXXXXXXXEEKTTKAIGANEEEQDEEDEGGLPARLSPTSVLSSDDEYLLESAAKKARKAGACVPQVEQFVQAAREDGVGTFAAGALERLLAASEEALKSINASSAAAEELEGVTQSAKGGDAAGEIRRIGDALERLRDDFREAKNLAVGSEEAAAKCQVEKAQEFTEQAKLKASAVSAQATAVTGDAREFALAAERQTEALQRAKALLPRVTAATEEALAAFSAFKTTLRESSAAE 1036
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: D7FPQ0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPQ0_ECTSI) HSP 1 Score: 493 bits (1270), Expect = 4.750e-154 Identity = 284/523 (54.30%), Postives = 343/523 (65.58%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNE----ASQQWGSSLHLSLSVAIAVAMTSGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLM-LMLNDESGDDEED--SGIVTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQXXXXXXXXXXXXXXXXASVTAAADKAQASFSAFKALVAEVGEAEMKARDAKISK 1548
SLDNVCAEPN SD RYL+GLHKTYARHQDFPRT P+DMRE FWVKHYAGKVKYT+ GWVERNMD IP+SF TL +ST+ ++ +G + + A LV+PTVAK FLASM++LN TLL TTCNF RCIKPNAAM+ GV+NNRYVV+QLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG N A+AEKLF GEPETALIA ILWAFEVPSE FRLG+TRVFF+AGQISTLQKILNET EKGPWIF RLQ+ALANR KAK AA + DE G I++ +D Y LE A K AR G+++P+V +L++A + D++GTY G ERV+ ASE I AS+ K EEL+ + ++G D A +R LED + +L F+E K L GA+EAAAKCQV+KT+E + AK AQ SV AA ++A +FS+FK L+AE + E A++A +K
Sbjct: 503 SLDNVCAEPNPSDARYLDGLHKTYARHQDFPRTQPRDMRENFWVKHYAGKVKYTVEGWVERNMDRIPESFGGTLAASTHAVVRASTSMYGQPPTGAAAKAKPTRSRKTLVKPTVAKAFLASMQDLNMTLLSTTCNFIRCIKPNAAMKCGVFNNRYVVEQLQCLGILQTCEVLKVGMPTRVTYTELKEVLGENAAQAEKLFEGEPETALIAGILWAFEVPSEVFRLGRTRVFFRAGQISTLQKILNETGPEKGPWIFDRLQQALANRHKAKKAAKEAKAAVDSALAAVMEAQEMTTKAIGAEQKDEDGAATRPPPESILSDDDEYKLESAVKKARIAGNSIPQVKLLIQAAKEDEIGTYVVGAFERVMTASEEATKTIQASSTKAEELDVLTRTAKGGDAAQEIRKLEDSLKRLRRSFQETKDLATGAEEAAAKCQVEKTQERVXXXXXXXXXXXXXXXXXVSGAKGIAQAAERQLQALSKANDLLPSVNAATEEALTAFSSFKNLIAETSKKETAAKEASDAK 1025
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: A0A6H5JRA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA1_9PHAE) HSP 1 Score: 480 bits (1235), Expect = 1.210e-149 Identity = 278/520 (53.46%), Postives = 337/520 (64.81%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMT-----SGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEE----DSGIVTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQXXXXXXXXXXXXXXXXASVTAAADKAQASFSAFKALVAEVGEAEMKARD 1533
SLDNVCAEPN SD RYL+ LHK + RH+DFPRT P+DMRECFWV+HYAGKVKYT+ GWVERNMD +P+SF TL +ST++ Q+ S S A LV+PTVAK FL SM LN TLL T CNFARCIKPNA M+ GV++NRYVVDQLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG + AEAEKLF GEPETALIA+ILWAFEVPSE FRLG+TRVFF+AGQISTLQKILNET EK PWIF+RLQEALANR KAK AAA ++ ++ GD +++ ++ Y LE AAK AR G V +V ++A D +G +A G +RV+AASE TL I S+ +EL+A + ++G D A +R LED + +L F+E K L G+QEAAAKCQV+KT +L KAS V QA V +A+ + AA + A A+ S+FKALVAE + E AR+
Sbjct: 517 SLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSKVVQEATSHYGKPPSGGAAAKAKPTRARKTLVKPTVAKAFLGSMEALNVTLLSTMCNFARCIKPNAEMQCGVFDNRYVVDQLQCLGILQTCEVLKVGMPTRVTYTELKEVLGASAAEAEKLFEGEPETALIAAILWAFEVPSEVFRLGRTRVFFRAGQISTLQKILNETGPEKAPWIFERLQEALANRHKAK-AAAEEAQAAVDLTETAVKEAHDETIKVIGAEEDDGDGSSVRPPPKPVLSSDEKYKLETAAKQARKAGDCVQQVDQFMQAAREDDIGKHAVGAMDRVVAASEETLKTIKTSSTIADELDAATRTAKGGDTAGEIRRLEDSLKRLLGSFQEAKDLAVGSQEAAAKCQVEKTTDLMEQTKRKASAVTGQAGVVMKAARDIEHAGKRQVEALKEANALLPTAAAATEAALAALSSFKALVAEASDEENVARE 1035
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: D8LMS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS5_ECTSI) HSP 1 Score: 431 bits (1108), Expect = 1.810e-130 Identity = 239/433 (55.20%), Postives = 280/433 (64.67%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMT-----SGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSGIVTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQ 1284
SLDNVCAEPN SD RYL+ LHK + RH+DFPRT P+DMRECFWV+HYAGKVKYT+ GWVERNMD +P+SF TL +ST++ Q+ S + S A LV+PTVAK FL SM LN TLL T CNFARCIKPNA M+ GV++NRYVVDQLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG++ AEAEKLF GEPETALIA+ILWAFEVPSE FRLG+TRVFF+AGQISTLQKILNET EK PWIF+RLQEALANR KAK AA +V ++A D++G +A G ERV+AASE TL I S+ EL+A + ++G D A +R LED + +L F+E K L G+QEAAAKCQ
Sbjct: 517 SLDNVCAEPNPSDSRYLSALHKEHERHEDFPRTKPQDMRECFWVRHYAGKVKYTVEGWVERNMDRVPESFSSTLAASTSKVVQEATSHYGKAPSGGAAAKAKPTRARKTLVKPTVAKAFLGSMEALNVTLLSTMCNFARCIKPNAEMQCGVFDNRYVVDQLQCLGILQTCEVLKVGMPTRVTYTELKEVLGDSAAEAEKLFEGEPETALIAAILWAFEVPSEVFRLGRTRVFFRAGQISTLQKILNETGPEKAPWIFERLQEALANRHKAKAAAEEA--------------------------------------------------------------QVDQFMKAAREDEIGKHAVGAMERVVAASEETLKTIKTSSTIANELDAATRTAKGGDTAGEIRRLEDSLKRLRGSFQEAKDLAVGSQEAAAKCQ 887
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: D8LMW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW4_ECTSI) HSP 1 Score: 387 bits (994), Expect = 1.210e-114 Identity = 247/479 (51.57%), Postives = 303/479 (63.26%), Query Frame = 1
Query: 1 SLDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMTSGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLND-ESGDDEEDSGI----------------VTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSRGSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQVQKTEELTAAASAKASNVESQARAVTNSAKSAAQ 1386
SLD VC+EP +D RYL+GLHKTY RHQ FPRT PKDMRECF VKHYAG VKYT+ GWVERNMDSIP +F +L +ST+++ + S P +RYVV+QLQCLGILQTCEVLKVGMPTRVTY+ LKEVLG+ AEA+KLF GEPETALIASILWAFEVPSEAFRLG+TRVFF+AGQIST+QKILNET EK PWI KRL++ALA+RQ+AK XXXXXXXXXXXXX ++ +S D++ D G+ V ++DL LE AAK A+ GST+P++ ++ A D++GTYA+G +RVLAAS+ +A + +A +G +LE + RG DEA ALR L + + L +FK + A EAAAKCQV KT ELTAA+ A+A+ VE QAR VTN A+ AAQ
Sbjct: 509 SLDCVCSEPKPTDARYLDGLHKTYVRHQHFPRTKPKDMRECFSVKHYAGTVKYTVEGWVERNMDSIPVAFAASLGTSTHKS-------------------LPSNPPPPP---------------------------------------DRYVVEQLQCLGILQTCEVLKVGMPTRVTYAELKEVLGDKAAEADKLFKGEPETALIASILWAFEVPSEAFRLGRTRVFFRAGQISTVQKILNETGPEKAPWIMKRLKDALASRQEAKXXXXXXXXXXXXXXXXXKKAEDAAAAVLGPRGGVDSSDEDSDDGVRLRHRLVPTSSSSASGVKEDDLRGLESAAKRAKTAGSTLPQIDAMVGAAREDKMGTYAEGLMDRVLAASKDAIAKVKDAAARGADLEKTVADVRGRDEATALRRLGELLKGLHTDFKAARRTAESALEAAAKCQVDKTRELTAASKAQATKVEGQAREVTNVARGAAQ 929
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: A0A6H5LIB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIB2_9PHAE) HSP 1 Score: 313 bits (802), Expect = 1.440e-87 Identity = 208/458 (45.41%), Postives = 278/458 (60.70%), Query Frame = 1
Query: 4 LDNVCAEPNASDLRYLNGLHKTYARHQ----DFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSL---------------SVAIAVAM-------TSGLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSGIVTQEDLYALEVAAKAARAHGSTVPKVHILLRATETDQVGTYAKGTKERVLAASEATLADINASAKKGEELEAQIKLSR-----GSDEAAALRLLEDRMGKLSAEFKEVKGLVHGAQEAAAKCQ 1284
LD+VC++P +D RYL LH ++++ + D + +D+ E FWV HYA KV YT+ GWVERNMDS+PQSF DT+ SS + GS + SV + + T+ L R TVA F+ SM+NL+ TL TTC F RC+KPNAAM+FG+++ YVV+QL+CLG+L+TCEVLKVGMPTR++Y LK LG+ + EAEK+F GEPE +L+A+ILWAF+VPSEAFRLG TRVFF+AGQIS L KILNET EK PW+ RL+ ALANR+ A++AA XXXXXXXXXXXXXXXXX +++ G ED+ AL AR +V +L+A+ + VG A G E+V ASE LADI + ++ ELE L + E +A+R L + + + + L ++EAA KC+
Sbjct: 556 LDDVCSQPLPTDKRYLERLHVSFSKRKSMGMDVAVSRSRDL-ESFWVNHYASKVLYTVDGWVERNMDSVPQSFADTILSSKHSVILDAGSEYRSASDAPEKDKKSSTGQIGSVPLPKKLGGRPQNKTTMLARRTVAGNFMISMKNLSATLAQTTCGFVRCVKPNAAMDFGIFDGHYVVEQLRCLGVLRTCEVLKVGMPTRISYIDLKMSLGDGILEAEKMFEGEPEKSLVAAILWAFDVPSEAFRLGATRVFFRAGQISVLHKILNETPTEKIPWVLSRLRLALANRRMARIAAEEXXXXXXXXXXXXXXXXXVSSAGTGRPVEKNNRPPMSPGASADEDIKALVATVDKARRAAQNTSQVKSVLKASVAEGVGQKAVGADEKVKKASEEALADIAKATQRANELEGLTNLGTTMADGATGETSAVRELHTALRDVREGLAKSRKLWKSSEEAADKCE 1012
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: A0A836C7J1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7J1_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.270e-85 Identity = 177/386 (45.85%), Postives = 226/386 (58.55%), Query Frame = 1
Query: 4 LDNVCAEPNASDLRYLNGLHKTYARHQDFPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMTSGLV--------------RPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAAXXXXXXXXXXXXXXXXXXXXXXLMLMLNDESGDDEEDSGIVTQEDLYALEVAAKAARAHGSTVP-KVHILLRATETDQVGTYAKGTKERVLAASEATLADINA 1116
LD VC EP +D Y LH +AR Q FP K M++ F V+HYAG+V+YT+ GW+ RN D IP++F+D L S+ EA Q L + + SG +PTVA+GF+ SM L L TTC+F RCIKPNA M+ GV+NN+YVVDQLQCLGILQTCEVLKVG+PTRVTY+ LK+VL N+ A AEKLF GEPE ALI+++LWAF+VPS+AF+LGKTRVFFKAGQI+ L+ +L SAEKG WI RL++ALA+RQ AK A + S +S QE + E++ R S P +V L+ A+ D +G YA K + A+E TLA A
Sbjct: 556 LDAVCREPAPTDEGYTRQLHAKHARDQHFPAVHKKFMKDAFMVRHYAGRVQYTVDGWITRNNDRIPEAFQDVLAKSSLEAVQGAAKVLSAAAPAPGHARVKSGTFGGGAXXXTKSSLGSKPTVARGFMDSMTKLQAVLEKTTCSFVRCIKPNADMKLGVFNNKYVVDQLQCLGILQTCEVLKVGLPTRVTYTELKDVLKNHAAAAEKLFEGEPEMALISAMLWAFDVPSDAFKLGKTRVFFKAGQIALLEGLLKNASAEKGDWIMDRLRQALADRQAAKAEAEEVDRLLKEAEDLYRTGLIDAGMAKKAASAVSCGPTPES----QELSQSQELSQTLKRVRKSVTPDQVEALIEASRVDNLGQYAPDAKAKFDVAAEDTLAKARA 937
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Match: A0A7S1XK01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK01_9STRA) HSP 1 Score: 246 bits (628), Expect = 1.170e-72 Identity = 124/245 (50.61%), Postives = 173/245 (70.61%), Query Frame = 1
Query: 88 FPRTAPKDMRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSSLHLSLSVAIAVAMTS----GLVRPTVAKGFLASMRNLNETLLGTTCNFARCIKPNAAMEFGVYNNRYVVDQLQCLGILQTCEVLKVGMPTRVTYSALKEVLGNNVAEAEKLFSGEPETALIASILWAFEVPSEAFRLGKTRVFFKAGQISTLQKILNETSAEKGPWIFKRLQEALANRQKAKVAAA 810
FP+T PKD R+ FWVKH+AGKV+YT+G W+ +N DS+P FKD + +N+ ++ + + A A + T+ GL +PTVA F++SMR+L + L + C+F RCIKPNAAME GV+++ YVV+QL+ LG+LQTCEVLKVG+PTR+TY+ L+ L + EA +F GEPE LIA+ILWAF+V +RLG+TRVFF+AGQIS +Q+IL+ + + W RLQEALA R+ + AA+
Sbjct: 7 FPKTHPKDKRDKFWVKHFAGKVQYTVGTWIVKNNDSVPDRFKDAIDGCSNQVIIDAQAADISTKAAATAASGTTRRRTGLKKPTVASTFMSSMRSLKKDLSESNCSFIRCIKPNAAMESGVFDDMYVVEQLRALGLLQTCEVLKVGLPTRITYAELRATLSDMPPEALSIFEGEPEQVLIAAILWAFDVDPAMYRLGRTRVFFRAGQISKVQEILHADLSGRKDWFVGRLQEALAAREAGQNAAS 251 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5456.12842.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5456.12842.1 >prot_H-elongata_contig5456.12842.1 ID=prot_H-elongata_contig5456.12842.1|Name=mRNA_H-elongata_contig5456.12842.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=588bp MRECFWVKHYAGKVKYTIGGWVERNMDSIPQSFKDTLHSSTNEASQQWGSback to top mRNA from alignment at H-elongata_contig5456:212..11027+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5456.12842.1 ID=mRNA_H-elongata_contig5456.12842.1|Name=mRNA_H-elongata_contig5456.12842.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=10816bp|location=Sequence derived from alignment at H-elongata_contig5456:212..11027+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5456:212..11027+ >mRNA_H-elongata_contig5456.12842.1 ID=mRNA_H-elongata_contig5456.12842.1|Name=mRNA_H-elongata_contig5456.12842.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3528bp|location=Sequence derived from alignment at H-elongata_contig5456:212..11027+ (Himanthalia elongata Himel1 dioecious)back to top |