prot_H-elongata_contig5449.12833.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5449.12833.1
Unique Nameprot_H-elongata_contig5449.12833.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5JAH7_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAH7_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 4.960e-49
Identity = 81/179 (45.25%), Postives = 113/179 (63.13%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAFG 180
            Y Q   F  LGG V +  D++ EI   +R  W  + RY REL+D+P+    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+LL +IG + K+  +R  SY + L    CES++  +R RR+L+AG L R   GRLPKR+ FG L G  +R RGG+ + W  CV  D++AFG
Sbjct:   72 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLRRVECESVEPTIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 250          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5JLT1_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT1_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 1.280e-45
Identity = 81/179 (45.25%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAFG 180
            Y Q   F   GG V    D++ EI   +R  W  + RY REL+D+PK    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+L  +IG + K+  +R  SY R LE   C+S++  +R RR+L+AG L R   GRLPKR+ FG L G  +R RGG+ + W  CV  D++AFG
Sbjct:  335 YAQTTEFQYPGGLVNDHGDLTREINCRSRGAWACLRRYGRELFDRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLFRVIGYKLKKDTYRQLSYPRTLERVECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLKAFG 513          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.660e-45
Identity = 77/178 (43.26%), Postives = 111/178 (62.36%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAF 179
            Y Q   F  LGG V +  D++ EI   ++A W  I RY  EL+D+P     LK R+++AEA+EALLYGC TW+ R+N Y  L+T HHR+LL +IG + KR  +R  SY +AL+   C+S++  +R RR+L+AG + R   GRLPKR+ FG L G     +G   + W  C++ D++ F
Sbjct:   51 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMF 228          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 6.660e-45
Identity = 78/187 (41.71%), Postives = 114/187 (60.96%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAFG---ITGHW 185
            Y Q   F  LGG + +  D++ EI   ++A W  I RY  EL+D+P     LK R+++AEA+EALLYGC TW+ R+N Y  L+T HHR+LL +IG + KR  +R  SY +AL+   C+S++  +R RR+L+AG + R   GRLPKR+ FG L G     +G   + W  C++ D++ F    + G W
Sbjct:  102 YAQTTEFRYLGGLINEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMFEARELRGSW 288          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5KQ16_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ16_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.290e-44
Identity = 75/176 (42.61%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIR 177
            Y Q   F  LGG V +  D++ EI   +R  W  + RY REL+D+P+    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+LL ++G + K+  +R   + + L+   C+S+   +R RRIL+AG L R   GRLPKR+ FG L G  +R RGG+ + W  CV  D++
Sbjct:   72 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVVGYKRKKDTYRQLGHAQTLKRVECQSVAATIRQRRILFAGALTRQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLK 247          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5KS82_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS82_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 2.080e-44
Identity = 80/179 (44.69%), Postives = 113/179 (63.13%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAFG 180
            Y Q   F  LGG V +  D++ EI   +R  W  + RY REL+D+P+    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+LL +IG + K+  +R  SY + L+   C+S++  +R RR+L+AG L R   GRLPKR+ FG L G  +R RGG+ + W  CV  D+ AFG
Sbjct:  424 YAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPSRLKIRLLQAEAMEALLYGCMTWSPLSRHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRFECQSVEATIRQRRLLFAGALARQPDGRLPKRLMFGELAGGEKRRRGGQEQNWPKCVLDDLNAFG 602          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.200e-44
Identity = 77/178 (43.26%), Postives = 111/178 (62.36%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAF 179
            Y Q   F  LGG V +  D++ EI   ++A W  I RY  EL+D+P     LK R+++AEA+EALLYGC TW+ R+N Y  L+T HHR+LL +IG + KR  +R  SY +AL+   C+S++  +R RR+L+AG + R   GRLPKR+ FG L G     +G   + W  C++ D++ F
Sbjct:   70 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNWLTCLKDDMKMF 247          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5K2V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V4_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 5.120e-44
Identity = 76/179 (42.46%), Postives = 110/179 (61.45%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAFG 180
            Y Q   F  LGG   + +D++ EI   +R  W  + R  REL+D+P+    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+LL +IG + K+  +R  SY +A +   C+S++  +R RR+L A  L R   GRLPKR+  G L G  +R RGG+ + W  CV  D++AFG
Sbjct:   52 YAQTTEFRDLGGLANEHSDLTREISYRSRGAWACLRRCGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLNGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQAPKRVECQSVEATIRQRRLLLARALARQPDGRLPKRLMLGELAGGEKRRRGGQKQNWPKCVLDDLKAFG 230          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 4.550e-43
Identity = 78/178 (43.82%), Postives = 111/178 (62.36%), Query Frame = 0
Query:    2 YRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAF 179
            Y Q   F  LGG V +  D++ EI   ++A W  I RY  EL+D+P     LK R+++AEA+EALLYGC TW+ R+N Y  L+T HHR+LL +IG + KR  +R  SY +AL+   C+S++  +R RR+L+AG + R   GRLPKR+ FG L G     RG   + W  C++ D++ F
Sbjct:  353 YAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGENPGRGSPEQNWLICLKDDLKMF 530          
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Match: A0A6H5L6U6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6U6_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 5.860e-43
Identity = 76/179 (42.46%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    1 SYRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVALSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSKRPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAFGNLEGAVRRERGGKVKEWNDCVQSDIRAF 179
            +Y Q   F  LGG V +  D++ EI   +R  W  + RY REL+D+P+    LK R+++AEA+EALLYGC TW+     Y  LR++HHR+LL +IG + K+  +R  SY + L+   C+S++  +R RR+L AG L R S GRLPKR+  G L G  +R + G+ + W  CV   ++AF
Sbjct:   71 NYAQTTEFRYLGGLVNEHGDLTREISHRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVIGYKRKKDTYRQLSYAQTLKRVECQSVEATIRQRRLLLAGALARQSDGRLPKRLMLGELAGGEQRRKWGQEQNWPTCVLDYLKAF 249          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5449.12833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAH7_9PHAE4.960e-4945.25Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLT1_9PHAE1.280e-4545.25Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JLH5_9PHAE2.660e-4543.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX9_9PHAE6.660e-4541.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQ16_9PHAE1.290e-4442.61Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KS82_9PHAE2.080e-4444.69Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JWS4_9PHAE2.200e-4443.26Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K2V4_9PHAE5.120e-4442.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA81_9PHAE4.550e-4343.82Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L6U6_9PHAE5.860e-4342.46Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47027FAMILY NOT NAMEDcoord: 3..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5449contigH-elongata_contig5449:8058..8672 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5449.12833.1mRNA_H-elongata_contig5449.12833.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5449 8058..8672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5449.12833.1 ID=prot_H-elongata_contig5449.12833.1|Name=mRNA_H-elongata_contig5449.12833.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
SYRQVQSFTSLGGAVTQTTDMSVEIVRWARACWNRIMRYLRELYDQPKVA
LSLKTRMVKAEAIEALLYGCSTWTLRKNDYAKLRTVHHRVLLCIIGIQSK
RPDHRMTSYNRALEITRCESIDTMLRTRRILWAGTLIRISGGRLPKRIAF
GNLEGAVRRERGGKVKEWNDCVQSDIRAFGITGHWKAIALKAEIWGETVA
ECGRR
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