prot_H-elongata_contig54478.12831.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54478.12831.1
Unique Nameprot_H-elongata_contig54478.12831.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length615
Homology
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13
Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 0
Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMAL--VKSLQLGIA----------------------SRPDGTLERTVLPDSLWELSLQGDFNQPIRSV 134
            L+AL +AL++TC G  WYTST +LQLASL  C  CR+  T    V+++ P  L  S+D P   P    WTRVP L++  +TW +P     ++P  A+  ++ L+ G A                      S  D T+E    P  L  ++  GDFNQPI  V
Sbjct:   52 LEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERV 213          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.580e-13
Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLW--ELSLQGDFNQPIRSVAW 136
            L +L +AL++TC G  WYTST +LQ ASL  C  CR+      +V+ + P +L  ++D P   P    WTRVP L+A  +TW + A     +P  A+     L      DG+LE    P  L   E      FNQP+  + W
Sbjct:   15 LSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKW 156          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.400e-13
Identity = 66/167 (39.52%), Postives = 78/167 (46.71%), Query Frame = 0
Query:    1 LDALAIALDQTCWGG--RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYG-----SPAW---TRVPPLQAVGLTWGLPAGVLSQSP----------RMALVKSLQLGIAS------------RPDGTLERTVLPDSLWELSLQGDFNQPIRSVA 135
            LDA  +AL+Q C G   RWY STL+LQL SL +C  CR V T   RV+ +TP SLW  S  +      SP     +RVP +QA GLTW LP GVL Q            R A   S    + S              D T+     P SL +LS    FNQ I  VA
Sbjct:   10 LDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGVA 176          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.930e-12
Identity = 60/144 (41.67%), Postives = 75/144 (52.08%), Query Frame = 0
Query:    1 LDALAIALDQTCWGG--RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWK--SSDPYGSPAWTRVPPLQAVGLTWGLPAGVLSQSPRMAL---VKSLQLGIASRPDGTLERTVLPDSLWELSLQGD-FNQPIRSVAW 136
            LDA  +AL Q   GG  RWYTSTLQLQLASL  C  CRS       V+ ETP +LW    ++P    + TRVP +QAVGLTW  P      S    L   ++SLQL + S     L+  V P  L  L +    F  P+  ++W
Sbjct:   10 LDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGTS-TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQV-SLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSW 151          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 7.890e-11
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 0
Query:   12 CWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD---PYGS-PAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSLQGD--FNQPIRSV 134
            C G RWYTST +LQ ASL  C  CR   T   RV+ +TP +L  + D   P+   P  TRVP L+A  + W +P     +SP  AL   ++L      +G+LE    P  L E+       FNQPI  V
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGV 130          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.490e-10
Identity = 53/142 (37.32%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYGSPAW------TRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVL-PDSLWELSLQGDFNQPIRSVA 135
            LDAL IAL+Q   GG WYTST+QLQLASL LCA CRS+      V+  TP  LW+ +              TRVP ++A  +TW LP   L      A  +     +    D  L R +  P+ L  L L   FN+ +  ++
Sbjct:   13 LDALIIALNQAS-GGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLGPGFNRSVEHLS 153          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.460e-9
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 0
Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSLQG--DFNQPIRSVAW 136
            L+A+ +AL +T  G  WYTST +LQLASL  C  CR+  T    V+   P  L  ++D P   P   +  RVP L+A  +TW +P     +SP  AL+    L   S  +G+LE    P  L  ++      FN PI  V W
Sbjct:   37 LNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKW 178          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.670e-8
Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 0
Query:    1 LDALAIALDQT----CWGG---RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSS---DPYGSPAWTRVPPLQAVGLTWGLPAGV-----LSQSPRMALVKSLQLGIASRPDGTLERT-VLPDSLWELSLQGD--------FNQPIRSVAW 136
            LDAL +AL+Q        G   RW+TSTL LQLAS+ LC  CRSV T   +++ +TP SLW  +     Y +P+  RVPPL+A G+ W + A       L++ PR    +    G A   D    R+ VL  S  +L +            + P+R + W
Sbjct:   18 LDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWTPTVYAGAYSAPSG-RVPPLRAHGVRWEIEATFAKHVGLAEEPREVCEEPRPSGGAPASDPQDSRSRVLSTSTRQLVVPTSSDSPSCDPLDAPVREICW 176          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.990e-8
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 0
Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYGSPAW------TRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVL-PDSLWELSLQGDFNQPIRSVA 135
            LDAL IAL+Q   GG WYTST+QLQL SL LCA CRS+      V+  TP  LW+ +              TRVP ++A  +TW LP   L      A  +     +    D  L R +  P+ L    +   FN+ +  ++
Sbjct:   44 LDALIIALNQAS-GGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLFGVGPGFNRSVEHLS 184          
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.320e-8
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 0
Query:    4 LAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD---PYGS-PAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSL-QGDFNQ 129
            L +AL++ C G RWYTST +LQLASL  C  CR       +V+ +TP +L  + D   P+   P  TRVP L+A  + W +P     ++   AL     L      +G+LE  V P  L ++     +FNQ
Sbjct:   21 LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQ 151          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A6H5JRF9_9PHAE2.100e-1335.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH81_ECTSI3.580e-1335.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNI6_9PHAE6.400e-1339.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1V9_9PHAE2.930e-1241.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYF0_9PHAE7.890e-1138.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT95_ECTSI3.490e-1037.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZZ4_9PHAE1.460e-936.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JR57_9PHAE1.670e-835.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JA08_9PHAE1.990e-835.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRK5_9PHAE3.320e-835.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 604..614
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 93..331
coord: 315..485
coord: 181..412
coord: 425..604
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 110..413
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 400..585
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 112..387
e-value: 7.4E-6
score: 26.6
IPR008615FNIPPFAMPF05725FNIPcoord: 283..324
e-value: 8.8E-6
score: 25.8
coord: 239..280
e-value: 1.8E-5
score: 24.8
coord: 127..169
e-value: 1.7E-7
score: 31.3
coord: 525..567
e-value: 7.6E-6
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54478contigH-elongata_contig54478:1094..3019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54478.12831.1mRNA_H-elongata_contig54478.12831.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54478 1094..3019 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54478.12831.1 ID=prot_H-elongata_contig54478.12831.1|Name=mRNA_H-elongata_contig54478.12831.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=615bp
LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETP
LSLWKSSDPYGSPAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLG
IASRPDGTLERTVLPDSLWELSLQGDFNQPIRSVAWPSSLRELAFGDSFD
QPIAGISWPSSLRRMTFGEYFDRPIADVAWPESLEELTFGDHFDQPLDAS
GLSWPATLRLLRVGRHFNRPISRVSWPRSLRKLTLGHHFNRPLSGIAWPP
SLEHLAFGTDFDQPVHEIRWPASLKRLEFGMRFNQPVASVAWPVELESLV
FESCFNQPIEAACWPDSLRSLAFGASFNQPIVGIAWPASLRRLKLGYRFD
QPMEGVGWPATLRVLVFGGFFNRPIAGVLWPAALERLVFGEHFNQPLSAV
TWPTGLRQLTLGDRFGQPLTDVDWPAALARLTLGDSADHPISSVVWPPFL
KELTFGEYFDQSLCGASWPASLRDLTLGTSFNQPIASVRWPPFLESLSFG
GYFNHPIAGVKWPVCLRTLSFGEDFDQAINQAGWPDSLERLAFGDDFNRP
LDGVKWPASLKRLTFGYRFNHPVGGVDWPPRLEWLTFGCSFRQPTNGIAW
PASLRRMERLATEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP