mRNA_H-elongata_contig54478.12831.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig54478.12831.1
Unique Name	mRNA_H-elongata_contig54478.12831.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRF9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-13
Identity = 58/162 (35.80%), Postives = 81/162 (50.00%), Query Frame = 1

Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMAL--VKSLQLGIA----------------------SRPDGTLERTVLPDSLWELSLQGDFNQPIRSV 402
            L+AL +AL++TC G  WYTST +LQLASL  C  CR+  T    V+++ P  L  S+D P   P    WTRVP L++  +TW +P     ++P  A+  ++ L+ G A                      S  D T+E    P  L  ++  GDFNQPI  V
Sbjct:   52 LEALIVALNETCDGKSWYTSTKELQLASLDFCIACRNCQTVHLNVDEQIPRRLLASADAPPPHPKRLCWTRVPRLRSRRVTWNMPTAAKLRTPIFAMTDMEYLEFGDAFGDSLEAVPWPEHLRTMEFHHDSPFDQTIELVQWPPFLQNVTFGGDFNQPIERV 213

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: D7FH81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH81_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.580e-13
Identity = 51/142 (35.92%), Postives = 71/142 (50.00%), Query Frame = 1

Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLW--ELSLQGDFNQPIRSVAW 408
            L +L +AL++TC G  WYTST +LQ ASL  C  CR+      +V+ + P +L  ++D P   P    WTRVP L+A  +TW + A     +P  A+     L      DG+LE    P  L   E      FNQP+  + W
Sbjct:   15 LSSLIVALNETCDGTSWYTSTKELQRASLEFCIACRNYPIMHLKVDPQIPRNLLAAADAPPPHPKRLCWTRVPRLRARSVTWNMRAAAELGNPIFAITDVDCLEFGGTFDGSLEAVTWPRRLKMIEFLYTSPFNQPLELIKW 156

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 6.400e-13
Identity = 66/167 (39.52%), Postives = 78/167 (46.71%), Query Frame = 1

Query:    1 LDALAIALDQTCWGG--RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYG-----SPAW---TRVPPLQAVGLTWGLPAGVLSQSP----------RMALVKSLQLGIAS------------RPDGTLERTVLPDSLWELSLQGDFNQPIRSVA 405
            LDA  +AL+Q C G   RWY STL+LQL SL +C  CR V T   RV+ +TP SLW  S  +      SP     +RVP +QA GLTW LP GVL Q            R A   S    + S              D T+     P SL +LS    FNQ I  VA
Sbjct:   10 LDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQLSFGCGFNQAIVGVA 176

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 2.930e-12
Identity = 60/144 (41.67%), Postives = 75/144 (52.08%), Query Frame = 1

Query:    1 LDALAIALDQTCWGG--RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWK--SSDPYGSPAWTRVPPLQAVGLTWGLPAGVLSQSPRMAL---VKSLQLGIASRPDGTLERTVLPDSLWELSLQGD-FNQPIRSVAW 408
            LDA  +AL Q   GG  RWYTSTLQLQLASL  C  CRS       V+ ETP +LW    ++P    + TRVP +QAVGLTW  P      S    L   ++SLQL + S     L+  V P  L  L +    F  P+  ++W
Sbjct:   10 LDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGTS-TRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQV-SLCTANLDSVVWPQGLQRLVMDCTVFIIPLEMMSW 151

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JYF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF0_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 7.890e-11
Identity = 50/129 (38.76%), Postives = 65/129 (50.39%), Query Frame = 1

Query:   34 CWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD---PYGS-PAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSLQGD--FNQPIRSV 402
            C G RWYTST +LQ ASL  C  CR   T   RV+ +TP +L  + D   P+   P  TRVP L+A  + W +P     +SP  AL   ++L      +G+LE    P  L E+       FNQPI  V
Sbjct:    2 CDGKRWYTSTKELQQASLEFCIACRKYQTLRLRVDVQTPRTLLAAVDAPSPHSKRPCRTRVPRLRARRVIWNMPTATELKSPIFALKDVVRLDFGPAFEGSLESVAWPQRLKEIDFSWGSLFNQPIEGV 130

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.490e-10
Identity = 53/142 (37.32%), Postives = 70/142 (49.30%), Query Frame = 1

Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYGSPAW------TRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVL-PDSLWELSLQGDFNQPIRSVA 405
            LDAL IAL+Q   GG WYTST+QLQLASL LCA CRS+      V+  TP  LW+ +              TRVP ++A  +TW LP   L      A  +     +    D  L R +  P+ L  L L   FN+ +  ++
Sbjct:   13 LDALIIALNQAS-GGEWYTSTMQLQLASLELCASCRSMHLLKLNVQHGTPTRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGLALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLLGLGPGFNRSVEHLS 153

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JZZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZZ4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.460e-9
Identity = 52/142 (36.62%), Postives = 71/142 (50.00%), Query Frame = 1

Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD-PYGSP---AWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSLQG--DFNQPIRSVAW 408
            L+A+ +AL +T  G  WYTST +LQLASL  C  CR+  T    V+   P  L  ++D P   P   +  RVP L+A  +TW +P     +SP  AL+    L   S  +G+LE    P  L  ++      FN PI  V W
Sbjct:   37 LNAIYVALGETRDGKSWYTSTKELQLASLEFCMACRAYQTLHLIVDVRIPRMLLAAADGPPQHPKRLSRRRVPRLRARHVTWNMPTAAELRSPIFALMDLDHLDFGSAFEGSLEAVTWPRRLESIAFHNFSPFNTPIDLVKW 178

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JR57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR57_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.670e-8
Identity = 56/160 (35.00%), Postives = 79/160 (49.38%), Query Frame = 1

Query:    1 LDALAIALDQT----CWGG---RWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSS---DPYGSPAWTRVPPLQAVGLTWGLPAGV-----LSQSPRMALVKSLQLGIASRPDGTLERT-VLPDSLWELSLQGD--------FNQPIRSVAW 408
            LDAL +AL+Q        G   RW+TSTL LQLAS+ LC  CRSV T   +++ +TP SLW  +     Y +P+  RVPPL+A G+ W + A       L++ PR    +    G A   D    R+ VL  S  +L +            + P+R + W
Sbjct:   18 LDALTVALNQAYDSRAGDGDNIRWFTSTLNLQLASVDLCRACRSVPTLLVKIDHDTPRSLWTPTVYAGAYSAPSG-RVPPLRAHGVRWEIEATFAKHVGLAEEPREVCEEPRPSGGAPASDPQDSRSRVLSTSTRQLVVPTSSDSPSCDPLDAPVREICW 176

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BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JA08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA08_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.990e-8
Identity = 50/142 (35.21%), Postives = 68/142 (47.89%), Query Frame = 1

Query:    1 LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSDPYGSPAW------TRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVL-PDSLWELSLQGDFNQPIRSVA 405
            LDAL IAL+Q   GG WYTST+QLQL SL LCA CRS+      V+  TP  LW+ +              TRVP ++A  +TW LP   L      A  +     +    D  L R +  P+ L    +   FN+ +  ++
Sbjct:   44 LDALIIALNQAS-GGEWYTSTMQLQLTSLELCAACRSMHLLKLNVQHGTPPRLWRGTATTRETRSVKRRNVTRVPVVRARTVTWKLPGVALRNMTGDAWSEVTTFSLGPGFDDDLPRGIQWPEKLTLFGVGPGFNRSVEHLS 184

[Close]

BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Match: A0A6H5JRK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRK5_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 3.320e-8
Identity = 47/131 (35.88%), Postives = 67/131 (51.15%), Query Frame = 1

Query:   10 LAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETPLSLWKSSD---PYGS-PAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLGIASRPDGTLERTVLPDSLWELSL-QGDFNQ 387
            L +AL++ C G RWYTST +LQLASL  C  CR       +V+ +TP +L  + D   P+   P  TRVP L+A  + W +P     ++   AL     L      +G+LE  V P  L ++     +FNQ
Sbjct:   21 LILALNEMCDGKRWYTSTKELQLASLEFCLACRKYQILELKVDAQTPRNLLAAVDAPPPHTKRPCRTRVPRLRARRVKWNMPTATELRTLMFALKDVNCLRFGGVFNGSLEAVVWPPPLKQIIFFSSEFNQ 151

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot

BLAST of mRNA_H-elongata_contig54478.12831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A6H5JRF9_9PHAE	2.100e-13	35.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FH81_ECTSI	3.580e-13	35.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KNI6_9PHAE	6.400e-13	39.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L1V9_9PHAE	2.930e-12	41.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JYF0_9PHAE	7.890e-11	38.76	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FT95_ECTSI	3.490e-10	37.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JZZ4_9PHAE	1.460e-9	36.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JR57_9PHAE	1.670e-8	35.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JA08_9PHAE	1.990e-8	35.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRK5_9PHAE	3.320e-8	35.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig54478	contig	H-elongata_contig54478:1094..3019 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	1845
Cds size	1845
Stop	1
Start	0

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930887.7196047-CDS-H-elongata_contig54478:1093..1386	1622930887.7196047-CDS-H-elongata_contig54478:1093..1386	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54478 1094..1386 +
1691679612.293688-CDS-H-elongata_contig54478:1093..1386	1691679612.293688-CDS-H-elongata_contig54478:1093..1386	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54478 1094..1386 +
1622930887.7351205-CDS-H-elongata_contig54478:1467..3019	1622930887.7351205-CDS-H-elongata_contig54478:1467..3019	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54478 1468..3019 +
1691679612.3039453-CDS-H-elongata_contig54478:1467..3019	1691679612.3039453-CDS-H-elongata_contig54478:1467..3019	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig54478 1468..3019 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig54478.12831.1	prot_H-elongata_contig54478.12831.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig54478 1094..3019 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig54478:1094..3019+
coding sequence from alignment at H-elongata_contig54478:1094..3019+

protein sequence of mRNA_H-elongata_contig54478.12831.1

>prot_H-elongata_contig54478.12831.1 ID=prot_H-elongata_contig54478.12831.1|Name=mRNA_H-elongata_contig54478.12831.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=615bp
LDALAIALDQTCWGGRWYTSTLQLQLASLSLCAVCRSVATSSARVEKETP
LSLWKSSDPYGSPAWTRVPPLQAVGLTWGLPAGVLSQSPRMALVKSLQLG
IASRPDGTLERTVLPDSLWELSLQGDFNQPIRSVAWPSSLRELAFGDSFD
QPIAGISWPSSLRRMTFGEYFDRPIADVAWPESLEELTFGDHFDQPLDAS
GLSWPATLRLLRVGRHFNRPISRVSWPRSLRKLTLGHHFNRPLSGIAWPP
SLEHLAFGTDFDQPVHEIRWPASLKRLEFGMRFNQPVASVAWPVELESLV
FESCFNQPIEAACWPDSLRSLAFGASFNQPIVGIAWPASLRRLKLGYRFD
QPMEGVGWPATLRVLVFGGFFNRPIAGVLWPAALERLVFGEHFNQPLSAV
TWPTGLRQLTLGDRFGQPLTDVDWPAALARLTLGDSADHPISSVVWPPFL
KELTFGEYFDQSLCGASWPASLRDLTLGTSFNQPIASVRWPPFLESLSFG
GYFNHPIAGVKWPVCLRTLSFGEDFDQAINQAGWPDSLERLAFGDDFNRP
LDGVKWPASLKRLTFGYRFNHPVGGVDWPPRLEWLTFGCSFRQPTNGIAW
PASLRRMERLATEL*

mRNA from alignment at H-elongata_contig54478:1094..3019+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig54478.12831.1 ID=mRNA_H-elongata_contig54478.12831.1|Name=mRNA_H-elongata_contig54478.12831.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1926bp|location=Sequence derived from alignment at H-elongata_contig54478:1094..3019+ (Himanthalia elongata Himel1 dioecious)
CTAGACGCCCTCGCGATCGCCCTCGATCAAACCTGCTGGGGGGGTCGATG
GTACACCTCCACGCTCCAGCTGCAGCTTGCGTCGCTGTCGCTGTGCGCGG
TGTGTCGGAGCGTCGCCACTTCGTCCGCGCGAGTCGAAAAGGAAACGCCC
CTTAGCCTCTGGAAATCCAGCGATCCCTACGGCTCCCCGGCGTGGACACG
CGTCCCTCCCCTGCAAGCTGTCGGGTTGACGTGGGGTCTACCGGCCGGGG
TCCTCTCGCAGAGCCCGCGGATGGCGCTCGTGAAGAGTCTGCAGTGGCTC
ATACTGCTGGATCTCTCGGGGCTCAACACCGTGGCGTGGCCTCCAGGGCT
GAAACGACTGATGGTTAAGCGTAGACTAGGTATAGCCTCAAGGCCGGACG
GGACCCTGGAGCGGACGGTGCTGCCAGACTCCCTCTGGGAGCTGTCGCTG
CAGGGAGACTTCAACCAGCCGATCCGGAGCGTGGCGTGGCCATCCTCGCT
GCGGGAGCTTGCCTTCGGGGACAGCTTCGACCAGCCGATCGCAGGCATCT
CGTGGCCGTCATCGCTGAGGCGGATGACGTTCGGGGAGTACTTCGACCGC
CCGATCGCCGACGTAGCCTGGCCGGAGTCCTTGGAGGAGCTGACATTCGG
CGACCACTTTGACCAGCCTCTCGACGCGTCCGGCCTCTCCTGGCCAGCAA
CCCTGCGCCTTCTTCGAGTCGGGCGCCATTTTAACCGGCCGATCTCGCGC
GTCTCGTGGCCGCGCTCCCTGCGGAAGCTTACCCTCGGGCACCACTTCAA
TCGCCCGCTGTCAGGGATCGCGTGGCCCCCCTCGCTTGAGCACCTGGCCT
TTGGCACCGATTTCGATCAGCCGGTTCACGAGATCCGCTGGCCAGCGTCT
CTGAAGCGACTTGAATTTGGGATGAGATTCAACCAACCAGTGGCGAGCGT
TGCGTGGCCCGTAGAACTGGAGAGCCTCGTGTTCGAGTCTTGCTTCAACC
AGCCGATCGAAGCAGCCTGCTGGCCGGATTCTCTCCGAAGCCTGGCGTTC
GGGGCTTCCTTCAACCAGCCGATCGTCGGGATCGCCTGGCCGGCGTCGCT
ACGTCGGCTAAAGCTGGGCTACCGCTTCGACCAGCCGATGGAGGGCGTCG
GGTGGCCCGCTACCCTTCGCGTCCTCGTGTTCGGCGGGTTCTTCAACCGC
CCCATCGCCGGTGTTTTGTGGCCGGCTGCTCTCGAGCGCCTGGTATTCGG
GGAGCACTTCAACCAACCCCTGTCCGCAGTCACGTGGCCCACCGGACTGC
GGCAGCTCACTCTCGGGGACAGGTTCGGTCAGCCCCTGACAGATGTGGAC
TGGCCTGCCGCCTTGGCCCGCCTGACCCTAGGCGACAGCGCCGACCACCC
GATCTCTAGCGTGGTGTGGCCCCCATTCCTGAAAGAGTTGACCTTTGGGG
AGTACTTCGACCAATCGCTTTGCGGGGCCTCGTGGCCCGCTTCTCTTCGG
GACCTAACGCTCGGGACCTCGTTCAACCAGCCGATCGCGAGCGTGCGGTG
GCCGCCCTTCCTGGAGAGTCTGTCGTTTGGGGGTTACTTCAACCACCCCA
TCGCCGGGGTGAAGTGGCCGGTGTGTCTGAGGACGCTGTCATTCGGGGAA
GACTTCGACCAGGCGATCAATCAGGCCGGATGGCCGGATTCGCTCGAGCG
CCTCGCCTTCGGGGACGACTTCAACCGTCCCCTGGACGGGGTGAAGTGGC
CGGCGTCGTTGAAGCGCCTGACGTTTGGCTACCGGTTTAATCACCCGGTG
GGCGGGGTCGACTGGCCACCGCGGCTGGAATGGTTGACGTTCGGTTGTTC
TTTCCGCCAGCCTACCAACGGTATCGCGTGGCCGGCGTCGCTGCGGCGAA
TGGAGCGGCTGGCAACCGAATTATAA

Coding sequence (CDS) from alignment at H-elongata_contig54478:1094..3019+

>mRNA_H-elongata_contig54478.12831.1 ID=mRNA_H-elongata_contig54478.12831.1|Name=mRNA_H-elongata_contig54478.12831.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3690bp|location=Sequence derived from alignment at H-elongata_contig54478:1094..3019+ (Himanthalia elongata Himel1 dioecious)
CTAGACGCCCTCGCGATCGCCCTCGATCAAACCTGCTGGGGGGGTCGATG
GTACACCTCCACGCTCCAGCTGCAGCTTGCGTCGCTGTCGCTGTGCGCGG
TGTGTCGGAGCGTCGCCACTTCGTCCGCGCGAGTCGAAAAGGAAACGCCC
CTTAGCCTCTGGAAATCCAGCGATCCCTACGGCTCCCCGGCGTGGACACG
CGTCCCTCCCCTGCAAGCTGTCGGGTTGACGTGGGGTCTACCGGCCGGGG
TCCTCTCGCAGAGCCCGCGGATGGCGCTCGTGAAGAGTCTGCACTAGACG
CCCTCGCGATCGCCCTCGATCAAACCTGCTGGGGGGGTCGATGGTACACC
TCCACGCTCCAGCTGCAGCTTGCGTCGCTGTCGCTGTGCGCGGTGTGTCG
GAGCGTCGCCACTTCGTCCGCGCGAGTCGAAAAGGAAACGCCCCTTAGCC
TCTGGAAATCCAGCGATCCCTACGGCTCCCCGGCGTGGACACGCGTCCCT
CCCCTGCAAGCTGTCGGGTTGACGTGGGGTCTACCGGCCGGGGTCCTCTC
GCAGAGCCCGCGGATGGCGCTCGTGAAGAGTCTGCAACTAGGTATAGCCT
CAAGGCCGGACGGGACCCTGGAGCGGACGGTGCTGCCAGACTCCCTCTGG
GAGCTGTCGCTGCAGGGAGACTTCAACCAGCCGATCCGGAGCGTGGCGTG
GCCATCCTCGCTGCGGGAGCTTGCCTTCGGGGACAGCTTCGACCAGCCGA
TCGCAGGCATCTCGTGGCCGTCATCGCTGAGGCGGATGACGTTCGGGGAG
TACTTCGACCGCCCGATCGCCGACGTAGCCTGGCCGGAGTCCTTGGAGGA
GCTGACATTCGGCGACCACTTTGACCAGCCTCTCGACGCGTCCGGCCTCT
CCTGGCCAGCAACCCTGCGCCTTCTTCGAGTCGGGCGCCATTTTAACCGG
CCGATCTCGCGCGTCTCGTGGCCGCGCTCCCTGCGGAAGCTTACCCTCGG
GCACCACTTCAATCGCCCGCTGTCAGGGATCGCGTGGCCCCCCTCGCTTG
AGCACCTGGCCTTTGGCACCGATTTCGATCAGCCGGTTCACGAGATCCGC
TGGCCAGCGTCTCTGAAGCGACTTGAATTTGGGATGAGATTCAACCAACC
AGTGGCGAGCGTTGCGTGGCCCGTAGAACTGGAGAGCCTCGTGTTCGAGT
CTTGCTTCAACCAGCCGATCGAAGCAGCCTGCTGGCCGGATTCTCTCCGA
AGCCTGGCGTTCGGGGCTTCCTTCAACCAGCCGATCGTCGGGATCGCCTG
GCCGGCGTCGCTACGTCGGCTAAAGCTGGGCTACCGCTTCGACCAGCCGA
TGGAGGGCGTCGGGTGGCCCGCTACCCTTCGCGTCCTCGTGTTCGGCGGG
TTCTTCAACCGCCCCATCGCCGGTGTTTTGTGGCCGGCTGCTCTCGAGCG
CCTGGTATTCGGGGAGCACTTCAACCAACCCCTGTCCGCAGTCACGTGGC
CCACCGGACTGCGGCAGCTCACTCTCGGGGACAGGTTCGGTCAGCCCCTG
ACAGATGTGGACTGGCCTGCCGCCTTGGCCCGCCTGACCCTAGGCGACAG
CGCCGACCACCCGATCTCTAGCGTGGTGTGGCCCCCATTCCTGAAAGAGT
TGACCTTTGGGGAGTACTTCGACCAATCGCTTTGCGGGGCCTCGTGGCCC
GCTTCTCTTCGGGACCTAACGCTCGGGACCTCGTTCAACCAGCCGATCGC
GAGCGTGCGGTGGCCGCCCTTCCTGGAGAGTCTGTCGTTTGGGGGTTACT
TCAACCACCCCATCGCCGGGGTGAAGTGGCCGGTGTGTCTGAGGACGCTG
TCATTCGGGGAAGACTTCGACCAGGCGATCAATCAGGCCGGATGGCCGGA
TTCGCTCGAGCGCCTCGCCTTCGGGGACGACTTCAACCGTCCCCTGGACG
GGGTGAAGTGGCCGGCGTCGTTGAAGCGCCTGACGTTTGGCTACCGGTTT
AATCACCCGGTGGGCGGGGTCGACTGGCCACCGCGGCTGGAATGGTTGAC
GTTCGGTTGTTCTTTCCGCCAGCCTACCAACGGTATCGCGTGGCCGGCGT
CGCTGCGGCGAATGGAGCGGCTGGCAACCGAATTATAAACTAGGTATAGC
CTCAAGGCCGGACGGGACCCTGGAGCGGACGGTGCTGCCAGACTCCCTCT
GGGAGCTGTCGCTGCAGGGAGACTTCAACCAGCCGATCCGGAGCGTGGCG
TGGCCATCCTCGCTGCGGGAGCTTGCCTTCGGGGACAGCTTCGACCAGCC
GATCGCAGGCATCTCGTGGCCGTCATCGCTGAGGCGGATGACGTTCGGGG
AGTACTTCGACCGCCCGATCGCCGACGTAGCCTGGCCGGAGTCCTTGGAG
GAGCTGACATTCGGCGACCACTTTGACCAGCCTCTCGACGCGTCCGGCCT
CTCCTGGCCAGCAACCCTGCGCCTTCTTCGAGTCGGGCGCCATTTTAACC
GGCCGATCTCGCGCGTCTCGTGGCCGCGCTCCCTGCGGAAGCTTACCCTC
GGGCACCACTTCAATCGCCCGCTGTCAGGGATCGCGTGGCCCCCCTCGCT
TGAGCACCTGGCCTTTGGCACCGATTTCGATCAGCCGGTTCACGAGATCC
GCTGGCCAGCGTCTCTGAAGCGACTTGAATTTGGGATGAGATTCAACCAA
CCAGTGGCGAGCGTTGCGTGGCCCGTAGAACTGGAGAGCCTCGTGTTCGA
GTCTTGCTTCAACCAGCCGATCGAAGCAGCCTGCTGGCCGGATTCTCTCC
GAAGCCTGGCGTTCGGGGCTTCCTTCAACCAGCCGATCGTCGGGATCGCC
TGGCCGGCGTCGCTACGTCGGCTAAAGCTGGGCTACCGCTTCGACCAGCC
GATGGAGGGCGTCGGGTGGCCCGCTACCCTTCGCGTCCTCGTGTTCGGCG
GGTTCTTCAACCGCCCCATCGCCGGTGTTTTGTGGCCGGCTGCTCTCGAG
CGCCTGGTATTCGGGGAGCACTTCAACCAACCCCTGTCCGCAGTCACGTG
GCCCACCGGACTGCGGCAGCTCACTCTCGGGGACAGGTTCGGTCAGCCCC
TGACAGATGTGGACTGGCCTGCCGCCTTGGCCCGCCTGACCCTAGGCGAC
AGCGCCGACCACCCGATCTCTAGCGTGGTGTGGCCCCCATTCCTGAAAGA
GTTGACCTTTGGGGAGTACTTCGACCAATCGCTTTGCGGGGCCTCGTGGC
CCGCTTCTCTTCGGGACCTAACGCTCGGGACCTCGTTCAACCAGCCGATC
GCGAGCGTGCGGTGGCCGCCCTTCCTGGAGAGTCTGTCGTTTGGGGGTTA
CTTCAACCACCCCATCGCCGGGGTGAAGTGGCCGGTGTGTCTGAGGACGC
TGTCATTCGGGGAAGACTTCGACCAGGCGATCAATCAGGCCGGATGGCCG
GATTCGCTCGAGCGCCTCGCCTTCGGGGACGACTTCAACCGTCCCCTGGA
CGGGGTGAAGTGGCCGGCGTCGTTGAAGCGCCTGACGTTTGGCTACCGGT
TTAATCACCCGGTGGGCGGGGTCGACTGGCCACCGCGGCTGGAATGGTTG
ACGTTCGGTTGTTCTTTCCGCCAGCCTACCAACGGTATCGCGTGGCCGGC
GTCGCTGCGGCGAATGGAGCGGCTGGCAACCGAATTATAA