prot_H-elongata_contig54441.12824.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54441.12824.1
Unique Nameprot_H-elongata_contig54441.12824.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig54441.12824.1 vs. uniprot
Match: D8LCH8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH8_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 1.280e-40
Identity = 86/171 (50.29%), Postives = 106/171 (61.99%), Query Frame = 0 
Query:    1 RPDRVGNFHRALDNEVVRLAFGEFCRRTLSSENVEFVRQVRELHRSSSAKGTTAEQLREKLRFIAEKFLGTESDTEVNVKGSSRVDALCAIEAALEASKN-------------YRGGAKNNGEGPW---AWVLATAATDSLVHLARDVHPLIFDGIWPRFLLSDEFQDMMN 155
            R  R  NFH A+DN +V +AF  FC + LSSENVEFV QVRE+++    + TTA  LREKLR +A  F+   S TEVNVKGS+R  ALCAI AALEA+ +              RG A      P    AW LA  A ++L  LA +VH +IFDG+WPRFL+S+EF  MMN
Sbjct:   97 RGRREENFHAAMDNRLVYMAFSSFCNKNLSSENVEFVLQVREVNQLLEMEETTAGDLREKLRQVAVAFVNPNSATEVNVKGSTRASALCAIGAALEAAGHDGCXXXXXXXXXXXRGSAGKESCCPGTSCAWALAEEAIEALARLAEEVHSVIFDGLWPRFLVSEEFHAMMN 267
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54441.12824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCH8_ECTSI1.280e-4050.29RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016137RGS domainSMARTSM00315RGS_3coord: 7..154
e-value: 1.3E-5
score: 34.6
IPR016137RGS domainPFAMPF00615RGScoord: 8..153
e-value: 1.8E-10
score: 41.1
IPR016137RGS domainPROSITEPS50132RGScoord: 7..154
score: 17.247
NoneNo IPR availableGENE3D1.20.58.1850coord: 4..155
e-value: 7.3E-16
score: 60.0
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 7..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54441contigH-elongata_contig54441:1692..3776 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54441.12824.1mRNA_H-elongata_contig54441.12824.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54441 1692..3776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54441.12824.1 ID=prot_H-elongata_contig54441.12824.1|Name=mRNA_H-elongata_contig54441.12824.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
RPDRVGNFHRALDNEVVRLAFGEFCRRTLSSENVEFVRQVRELHRSSSAK
GTTAEQLREKLRFIAEKFLGTESDTEVNVKGSSRVDALCAIEAALEASKN
YRGGAKNNGEGPWAWVLATAATDSLVHLARDVHPLIFDGIWPRFLLSDEF
QDMMN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
IPR036305RGS_sf