mRNA_H-elongata_contig54420.12822.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig54420.12822.1
Unique NamemRNA_H-elongata_contig54420.12822.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI)

HSP 1 Score: 318 bits (814), Expect = 9.820e-98
Identity = 217/542 (40.04%), Postives = 289/542 (53.32%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDT--PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTS-------TSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGV-----PVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L+VGG +LN  R +     ++P   W L NLF+ VWD R+P+D DGRI LDESP  +KHL+H+ +E+S     S  +   D +    +V     YL  VAR L L    P  GM V    +  LS  E+ EL+  ++ WCPG+P  + L+YRASRDG++   FH  C + SP+TITL+ V      +  S++GGF SV W P A   D                 S GAFIFM K+    G   +QP+ W     + G   +  G   GP FG     V F +           S ++  G           F NL  + ++EIEV+ + Y      S  S   KI   E           +T  R   ++A  FG +IAG  LMEER+AL  AEAEL  A  K  A+  ALA+VYGP++A G  D +VEL+V GTRMTTLRSTLQAC ESALAA F++ KWP   KD       +I+C+PA+F KVLDVLR+RKRA W+   R     L+ V +   DR +F+ FV+MYFPG ++F+ D V
Sbjct:   48 LNVGGSHLNFRRCILAGR-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHSLIESSGAAPGS--LPRGDTLALDEMV-----YLPYVARALGLSAYIPRQGMEV-VGGTTSLSHCEVGELTATLQGWCPGNPNTMRLLYRASRDGWSPYPFHASCGNNSPNTITLLRVG-----ASQSIVGGFSSVPWSPHAYGGDSIMS-------------SLGAFIFMLKDSDMGGPNSFQPVKWGKRDNNGGCDVV-VGASRGPYFGRTDLVVNFNNYFPVTLQAQPYSYDVPSGST---------FPNLNGQTITEIEVFQV-YSAAATTSSPSKRLKIQGPEDTHGAVSTSSTNTASREANSDAETFGNAIAGA-LMEERIALHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRE----LAHVRVDAADRPAFDSFVNMYFPGFENFITDMV 546          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 5.420e-97
Identity = 209/541 (38.63%), Postives = 288/541 (53.23%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPF--LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTA-NKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICS--TEGVPVYADTVYRGQVNNACL-----------FGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVM 1774
            L+VGGL L   RSV +S G++    W L NLF+  WD RVP+D DG I LDESP  +K LVH  L AS ++  +            P +      LH  A  L L      +GM ++  ++I    +E  +L+  +++WCPG P  LEL+YRASRDG+N   F+ +C   SPST+TL+ V   +     S+IGGF SV W P   N S G+Y+ G           SPGAF+F+ K+   +G   + P+ W +  G     A+  G   GP FG    +V +         +    +T      + F  L  + + +IE +                 ++CS  T  +P+       G+  N              FG  IA   LME  + L +A  EL LAK +  A A+ALA+VYGPD+ASG+ + +VEL+V GT MTTLRSTL+ CP+SALAARFD+ KWP+  KD       +IDC PA+F+KVLDVLR+ KRA W+  +    +  +RV I  GDR +FEEFVDMYF GC+SF+M
Sbjct:   70 LNVGGLLLAFRRSVLDSEGKQQPPTWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVHRLLTASSSSKATVGRAGDFARNEDPAL------LHYTAGVLGLSGCLAPVGMSIQGGTTI-FEPHETSKLTAVVQDWCPGHPGGLELLYRASRDGWNGATFNARCKGDSPSTVTLLRVKGCETGGTDSIIGGFSSVPWSPAIQNYSYGYYLRG-----------SPGAFVFILKD-EGKGSSTFPPMKWGVKNGLAAK-AVNQG--CGPCFGECDLKVNWNGNMS---TVGTDNSTYDVPAGSHFLQLNGRHLLDIEAF-----------------RVCSKPTHTLPLAKQEHRAGEGTNTPTAPVRTSDDVPTFGQLIADS-LMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKETRVTIKPGDRVAFEEFVDMYFKGCESFIM 567          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.050e-91
Identity = 208/539 (38.59%), Postives = 286/539 (53.06%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFD-VVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRG---QVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTR----MTTLRSTLQACPESALAARFDDSKWPSDGKDFG------VIDCNPAIFAKVLDVLRLRKRAKWSQQ--KRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L+VGGL +N+ RSV    G+     W L +LF+  VWD R+P+ EDGRI LDESPV ++ L+    +AS     ++N             D ++PY+  VA  L LD   LGM V    S  L  +E E L+  I  WCPG P+ LEL+YRASRDG++ +  H +C D SPSTI+L  V   D ++  S++GGF SV W     ++ G               DS   F+F+ K+G+      +QP  W L   +          + G  FG G  R+   S    +  +  G           F  L  + ++++EV+ +   R+   +  +  P +        Y +          N+   FG SIAG  L +ER AL  A+ EL+ A     A+  ALA+VYGP  A+G  DPIVEL+V G+R    MTTL STLQACPESALAARFD++KWP   KD        + DC+P++F+KVLDVLR++KR  W+    K  A V+   V I + DRA FEEFV+MYFPGC+SF+MD V
Sbjct:   37 LNVGGLDVNIARSVLRKAGESSSSTWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELL---CDASSKRPGNSN-----------FPDDEKPYIGGVASALGLD---LGMTVP-GGSTTLPHDEAERLTATILGWCPGRPEGLELLYRASRDGWSGDALHARCGDDSPSTISLFRVKTQDANTSDSIVGGFSSVPWTALPPENRGL--------------DS---FLFILKDGIEES-HNFQPAIWGLRIRNPKPSGAYDMEKFGLIFGRG--RIFDLSVVWTNQTLVAGNQVYAVPPGFQFIRLGGRAIADVEVFRV---RQTMGTLPTTPPTVTGLIDCAAYFEASAMSAEEHENDVYRFGTSIAGS-LKDERAALHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGAAVL---VAIKDADRAPFEEFVNMYFPGCESFIMDSV 530          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 1.070e-90
Identity = 197/530 (37.17%), Postives = 277/530 (52.26%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDT--PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L+VGG +L   R V +   ++P   W L NLF+ VWD R+P+D DGRI LD+SP  +K L+H+ +E+S     S       +     L   +  YL  VAR L L    P  GM V    + +LS  E+ EL+  ++ WCPG+P  ++L+YRASRD ++   FH  C + SP+TITL+ V      + +S++GGF SV W P A   D             +   S GAFIFM K+    G   +QP+ W+    + G+  +  G   GP FG     V FT        +     +    ++  F NL  + ++EIEV+ +                IC+                            G LMEER+AL  AEAEL  A  K   +  ALA+VYGP++A G  D +VEL+V GTRMTTLRSTL+AC ESALAA F++ KWP+  KD       +I+C+PA+F KVLDVLR+RKRA W+   R +    + V +   DR +F+ FV+M+FPG ++F+ D V
Sbjct:   70 LNVGGSHLRFRRCVLDGK-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHSLIESSGAAPGS-------LPRGETLAPDEMAYLPHVARALGLSAYIPLQGMEV-VGGTTILSHCEVGELTATLQGWCPGNPNTMQLLYRASRDDWSPYPFHASCGNNSPNTITLLRVG-----ASASIVGGFSSVPWSPHAYGGD-------------SVMSSLGAFIFMLKDSDMGGPNSFQPVKWSKRDNNGGYDVV-VGASRGPFFGRTDLVVNFTYVP---VTLQAQPYSYDVPSVPAFPNLNGQTITEIEVFQV---------------NICNA-------------------------IAGALMEERIALYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDRES----AHVRVDAADRPAFDSFVNMFFPGFENFITDMV 524          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 6.510e-79
Identity = 190/525 (36.19%), Postives = 259/525 (49.33%), Query Frame = 2
Query:  260 ESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPF--LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYS-PSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGG-GYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTE---GVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQ-----KRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            E  G++P   W L +LF+  WD RVP+D DGRI LDESP+ +KHL+    EA +   N+ N             D Q    H  AR L L      +GM +K   +     +E  +L+  ++ WCPG+P        A +D         +C D S P+TIT + V      +   +IGGF S+ W      SD  Y              SPGAF+FM K+G  R    YQ   W +  G + +   R G   GP FG G    V +  T      +  G  T    T +PF  L   R+ ++E + +        S           +   G PV      R        FG  +A   LMEE   L  A  EL LAK +  A A+A+A+VYGP++A+G  D +VELNV GTRMTTLRSTL+ CP+SALAA F++ +WP   KD       +IDC P++F+KVLDVLR+ KRA W++      +   + +  RV I  GD A+FEEFVDMYFP C++F+M+ V
Sbjct:   39 EGKGEQPSSTWALGDLFEAEWDKRVPRDADGRIVLDESPICVKHLI----EALLLRPNAANGTATGEADMSR--DDQPDLFHHTARVLGLSGQLAPVGMTIK-GGTTTFDPHEASKLTAVVQRWCPGNPG------AACQD---------RCGDQSSPTTITFLRVKGRGAAATDCIIGGFSSIPWDDFMYDSDAGYYS-----------PSPGAFLFMLKDGEGRHSGVYQSTKWGVKDGRSAYAVYR-GQGYGPCFGEGRDLHVVWNGTESA---VRTGNQTYHAPTGSPFPELNGCRLVDVETFRVGPKPNTPTSSTKQEDHAVEDKTGPGAPVKTADDVRS-------FGDLVADS-LMEEEKLLQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPCCETFMMEHV 518          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7FR77_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR77_ECTSI)

HSP 1 Score: 243 bits (620), Expect = 2.100e-69
Identity = 189/549 (34.43%), Postives = 270/549 (49.18%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDS--SIVLSTN-ELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRS----SVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPL------HWNLPG------GSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWG----TRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG---VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L+VGG  +++ R+  + +     + W+LANLFD  WD R+P+D +G + LDESPV  KHLV                   D +  V   D Q  YL  V+  L + +P    R + DS  S +L    EL+ L+  + +WCPG+P+ L+L+YRASRDG++   FH +C D SP T+TL  +N  D  +R     SV+G F SV W P    SDG+             K SPG F+F+    L  G   ++P       H+   G      G    P+     ++   F G     + TS +     ++             F       V+EIEVY +     + +                   D ++R        FG SIA     EE  AL  A+++L+ A +K  A+ASALA+VYGP +AS   DP+V+ +V G    TR+TTLRSTLQ CP   L AR D SKW  +    G   + DC+PA+F+KVLDVLR++KRA W   +     + + VV+   DR +FE+ V MYFPGC+  ++D V
Sbjct:   36 LNVGGSNVDISRADLQRLPALS-EAWKLANLFDSDWDERLPRDANGLMVLDESPVCFKHLV-------------------DALGGVLPTDEQA-YLPYVSNALGVPSPARVPRRRVDSEGSAMLGIGGELDRLARTVLDWCPGNPERLDLLYRASRDGWDTRHFHARCGDDSPMTVTLYRLN--DASNRKGLNCSVLGCFSSVPWTPP---SDGYTK----------LKSSPGGFVFI----LTDGSRSFRPTKLKVHPHYAKRGCGLVVLGEGSMPSFHVDLEV---FHGKERHRSCTSGTNAKYRLWTDSGAFYVPEGCSFLKYDGIDVAEIEVYRVWSAEEERS-------------------DDIHR--------FGGSIAAS-FEEEHKALHKAQSKLVEATEKGAASASALAAVYGPGVASNSRDPVVDFSVRGSRTTTRITTLRSTLQLCPY--LVARLDQSKWTENKDKHGRWLIKDCSPAVFSKVLDVLRMKKRAGWIGGE-----VKAHVVVKATDREAFEQAVGMYFPGCERVILDHV 506          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.600e-68
Identity = 203/581 (34.94%), Postives = 280/581 (48.19%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVF-ESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVIL---RDVITPVPLVD-HQRPYLHKVARDLRLDT-----PFLGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDD--PDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSK------DSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRS----CNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKICSTEGVPVYAD----------TVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDP--IVELNVWGTRMTTLRSTLQACPESALAARFDDSKWP----SDGK--DFGV-----------IDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILS-------RVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L++GG+  NV RS+  E+ G    K   L  LF+ +WD RVP+D DGRI LDESP  +KH++HT L    TT       L   R    P   V  H+ PYL  ++  L L       P     V    +   +  +L + S  +R+WCPGDP  L L+YRASRDGF+   F  +C      TITLI V  DD  PDS   V+GGF  +  VP           G   G+  +S       DSPG     AK    + GE    +HW          A  C    GP FG     VTF+ +  +S    C +  G      D  +PF  L  K V+EIE++ +    R     V  AP   +     ++ D          +    +   A  FG+S+A  +LMEE++AL+ A+ EL  AKK+  A A ALA VYGP +AS + +   +VEL+V G  +TTLRSTL+ACP+SA +     +  P     DG+  D G+           +DC+P+ F+K+LDV+R+RKRA W    +   +I         R+ + E DRA F+  V   FP C+ FVMD +
Sbjct:   69 LNIGGVPANVHRSLIAEAEG---FKGSVLGALFEQMWDERVPRDMDGRIVLDESPACVKHIIHTLLRGGCTTRTKETASLCHFRSAAGPSAAVAAHEEPYLLYISHVLGLSNVIPACPNTKGMVVAGGTTTANPLQLPQWSSLLRSWCPGDPAGLHLLYRASRDGFSTGPFQ-QCVRGVCETITLIRVKSDDGRPDS---VVGGFSDIEIVPQEV--------GMETGNQRSSSAFLFLLDSPGGGFPTAKKWSIKEGEDSCAIHWP-------ETADVC---AGPAFGLEDMCVTFSESEGQSGSSGCTLSTGGEFYDVDEDSPFVGLDGKEVAEIEIFRVDKTARVEHQDV--APVATTPPQSNIFPDKRKHFLHPDRSADEIEAAYALQFGSSLAE-LLMEEQMALAYAQTELEEAKKRAAATARALAIVYGPGVASARVEENAVVELSVRGMSVTTLRSTLEACPDSAFSTWLGAADRPVGCGDDGEANDEGLGGRTSEDCRRKVDCDPSCFSKILDVMRMRKRAAWVTDDQQGALIREAGGGHTVRIPVPESDRACFKNLVHTLFPECEDFVMDMI 621          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.110e-56
Identity = 150/385 (38.96%), Postives = 199/385 (51.69%), Query Frame = 2
Query:  662 RASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPKI-CSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTR----MTTLRSTLQACPESALAARFDDSKWPSDGKDFG------VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILSRVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            RASRD ++ + FH +C D SPSTI+L  V     ++  SV+G F  V W  +   S                  SPG+F+FM K+G   G +  QP  W    G TG   +  G   GP        V +     R   +  G   I T+   PF     + V +IEV+ +L         +  A    CS      + + VYR        FG SIAG  L +ER AL  A+ EL+ A     A+  ALA+VYGP+IA+G  D +VEL+V G R    MTTL STLQACPESALAARFD++KWP   K+        + DC+P +FAKVLDVLR++KR  W+   +  +  +  V I   DRA FE+FV+MYFP C+SF+MD V
Sbjct:  175 RASRDSWSDHAFHARCGDDSPSTISLFCVEAQGANNSDSVVGRFSVVPWTASPEFSPVL--------------PSPGSFLFMLKDGN-EGSDAVQPSKWGPKVGYTGQ--VVDGRTEGP--------VDWVMCLHRMFTVHCGIYDIPTE--HPFLYHMGREVVDIEVFRVLPTSLTVTGLIDCAAYFKCSDMSAEEHENDVYR--------FGMSIAGS-LRDERAALHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRAAVL-VAIKAADRAPFEKFVNMYFPACESFIMDSV 522          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5JD55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD55_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 1.080e-52
Identity = 172/535 (32.15%), Postives = 241/535 (45.05%), Query Frame = 2
Query:  215 LSVGGLYLNVCRSVFESMGQKPVKDWELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRL---DTPF-LGMRVKCDSSIVLSTNELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDSRSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGR-RDAASGVSDAPKICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDP-IVELNVWGTRMTTLRSTLQACPESALAARFDDSKWPSDGKDFG-----VIDCNPAIFAKVLDVLRLRKRAKWSQQKRTAKVILS-RVVITEGDRASFEEFVDMYFPGCKSFVMDWV 1783
            L+VGG  L   RSV E  G++    W L  L +  WD RVP+D DGRI LDESP         ++  +   H+         + P    D +   L+  AR L L     PF + MR       +L  +E + L+  ++ WCPG P  LEL+YRASRDG++A  F  KC D SPSTI+L       P S        F++S +   + + G                          NG+         + W +   ST                        T   Q    +                 L  + V +IE + L Y R  DA S  S  PK      + V    V    +  +  FG  IA   LMEE + L  A  EL +A+ +  A A+AL  VYGPD+A G+ +  +VEL+V GTR+T + STL+ CP S  A +F + +WP+  KD       VIDC P++F+KV+D+LR    A W++     +   + RV I   DRA FEEFVD+YF GC+S +M++V
Sbjct:   23 LNVGGSRLTFHRSVLEGKGEQQGLTWALGTLCEAEWDKRVPRDSDGRIVLDESPTC------PRVWGAREEHD---------LAP----DDKPELLYYTARVLGLRGQSAPFDMPMR---GGPNILEPHETKRLTAIVQGWCPGHPGGLELLYRASRDGWSARSFDDKCRDGSPSTISL-------PFSGFESRADLFTISTIVLFSAAPG--------------------------NGMCD-----LRVVWKVGAASTVQTK------------------NLTQDVQAESRLLA---------------LNGRGVVDIETFRLCYCRPTDALS--SAKPKHHFIGDIAVPTAPVRSRLLRMSFPFGRLIADA-LMEE-IVLQEANNELAVAEARTTACATALVVVYGPDVAKGREEEDVVELSVCGTRVTRMCSTLRVCPGSTFATQFLEDRWPATKKDLDDNGRRVIDCEPSVFSKVMDILR----ASWARGDDDQEANKTPRVTIKPCDRAEFEEFVDIYFKGCESLIMEYV 456          
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Match: A0A6H5KTF6_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTF6_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 1.200e-49
Identity = 153/443 (34.54%), Postives = 206/443 (46.50%), Query Frame = 2
Query:  290 WELANLFDVVWDSRVPKDEDGRIFLDESPVILKHLVHTKLEASITTHNSTNVILRDVITPVPLVDHQRPYLHKVARDLRLDTPFLGMRVKCDSSIVLST-----------NELEELSVHIRNWCPGDPQDLELIYRASRDGFNANGFHTKCTDYSPSTITLITVNHDDPDS-RSSVIGGFFSVSWVPTANKSDGFYMDGCCYGSTYNSKDSPGAFIFMAKNGLARGGEKYQPLHWNLPGGSTGHPAIRCGTQLGPDFGGGGYRVTFTSTSQRSCNIFFGENTIITDTMTPFKNLQQKRVSEIEVYLLLYGRRDAASGVSDAPK------------ICSTEGVPVYADTVYRGQVNNACLFGASIAGGVLMEERVALSNAEAELLLAKKKVQAAASALASVYGPDIASGKPDPIVELNVWGTRMTTLRSTLQACPESALAARFD 1546
            W L +LF+ +WD R+P+D +G I LDESP+ +KHL+   L+ S                                    LD+PF      C     L T           +E+  L+  ++ WCPG+P  L LIYRASRDG+    FH  C   SP TITL  V      +   +++GGF   SW            + C +     S+ SP AFI M K G A G   +QP  W +P    G P     +  GP FG     ++    + R  ++  G   +  D  + F  L  + V EIEV+ +    R+A +G    P             I  T G P  +D       ++  + GA IA   LMEER AL  A AEL     K   + +AL +VYGPD+A+GK D +VEL+V  TR+TTLRSTLQACP+SALAARFD
Sbjct:   65 WNLCDLFESMWDKRIPRDANGLIVLDESPICVKHLLRALLKKSGAA--------------------------------ALDSPF-----GCSGQGWLRTRWPTSPRSWRLSEVCPLTDILQGWCPGNPSRLHLIYRASRDGWGGEAFHECCGKDSPVTITLFRVLSSAGTAVTDTIVGGFSRSSW-----------SNSCPF-----SRFSPDAFICMVKYGSADGSSSFQPSKW-IP--RRGLPNYLGTSSHGPCFGSD-LCMSLHDDNARFLHVAIGAFNVSED--SAFFTLGGQTVKEIEVFRVC---REATAGSPPPPPRAKPATTSENGLIDLTSGGP--SDAATESYDDDVRMSGALIAES-LMEERAALREAFAELAQPNTKAGESVNALTAVYGPDVAAGKEDTVVELSVRETRLTTLRSTLQACPDSALAARFD 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54420.12822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2H5_ECTSI9.820e-9840.04TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LAP0_9PHAE5.420e-9738.63TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIV0_ECTSI1.050e-9138.59TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5L232_9PHAE1.070e-9037.17TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FIX7_ECTSI6.510e-7936.19BTB_2 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FR77_ECTSI2.100e-6934.43TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7G141_ECTSI2.600e-6834.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JCR8_9PHAE1.110e-5638.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JD55_9PHAE1.080e-5232.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTF6_9PHAE1.200e-4934.54TLDc domain-containing protein n=1 Tax=Ectocarpus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54420contigH-elongata_contig54420:1765..3547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1783
Cds size285
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930886.9084501-UTR-H-elongata_contig54420:1764..32621622930886.9084501-UTR-H-elongata_contig54420:1764..3262Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54420 1765..3262 -
1691679612.055579-UTR-H-elongata_contig54420:1764..32621691679612.055579-UTR-H-elongata_contig54420:1764..3262Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig54420 1765..3262 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930886.9302776-CDS-H-elongata_contig54420:3262..35471622930886.9302776-CDS-H-elongata_contig54420:3262..3547Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54420 3263..3547 -
1691679612.066308-CDS-H-elongata_contig54420:3262..35471691679612.066308-CDS-H-elongata_contig54420:3262..3547Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig54420 3263..3547 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54420.12822.1prot_H-elongata_contig54420.12822.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig54420 3263..3547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig54420.12822.1

>prot_H-elongata_contig54420.12822.1 ID=prot_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MQRKSINEKATFTTATAASSKELQATLRNRRSYYLDHAWDTLDDGWKKLE
RKMVAIDITKPVALDGALVHLTERWGVVFERLPLCLRIDGPKTR*
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mRNA from alignment at H-elongata_contig54420:1765..3547-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig54420.12822.1 ID=mRNA_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1783bp|location=Sequence derived from alignment at H-elongata_contig54420:1765..3547- (Himanthalia elongata Himel1 dioecious)
ATGCAACGTAAATCGATCAATGAGAAAGCTACTTTCACGACGGCTACTGC TGCCTCCTCGAAAGAACTGCAGGCCACGCTACGCAATCGGAGATCATATT ATTTGGATCACGCGTGGGACACCTTGGACGATGGCTGGAAGAAACTCGAA AGGAAGATGGTCGCCATCGATATCACCAAGCCAGTGGCCTTGGACGGTGC CTTGGTCCACCTGACTGAGCGTTGGGGGGTTGTATTTGAACGTTTGCCGC TCTGTCTTCGAATCGATGGGCCAAAAACCCGTTAAAGACTGGGAATTGGC AAACCTGTTCGATGTCGTGTGGGATTCACGCGTCCCGAAAGACGAGGACG GGAGAATTTTCCTAGACGAGTCCCCGGTTATCCTAAAACATCTCGTCCAT ACTAAACTGGAGGCTTCCATCACGACTCATAATTCAACAAACGTTATTTT GCGGGATGTCATCACTCCCGTCCCTCTTGTCGATCACCAACGCCCCTACC TCCATAAAGTCGCTAGGGACCTGAGACTGGACACCCCATTCCTTGGAATG AGGGTGAAATGTGACAGTAGTATCGTGTTGAGCACTAATGAGCTCGAGGA GCTTAGCGTTCATATACGAAATTGGTGTCCAGGTGACCCACAAGATCTGG AGTTGATCTACAGAGCATCTCGGGATGGGTTCAACGCTAACGGGTTCCAC ACCAAGTGTACAGACTATAGTCCCTCCACTATAACTCTTATAACGGTAAA TCACGATGACCCTGACAGCAGGAGCAGCGTCATTGGGGGCTTCTTCAGTG TATCATGGGTCCCGACGGCGAACAAAAGTGATGGATTCTACATGGATGGC TGTTGTTATGGATCTACCTACAACAGCAAAGATTCTCCTGGGGCGTTTAT CTTCATGGCCAAGAATGGATTAGCAAGAGGGGGGGAGAAATACCAACCTC TTCATTGGAACCTGCCTGGAGGCTCCACAGGCCACCCCGCGATAAGATGT GGTACCCAACTGGGACCTGATTTTGGCGGTGGTGGGTACAGGGTGACTTT CACCTCGACTTCTCAACGTTCATGTAATATTTTCTTTGGCGAAAATACCA TCATCACAGACACGATGACACCTTTCAAGAACCTACAACAGAAGCGAGTC TCCGAGATAGAGGTCTACCTTCTTCTTTATGGCCGACGAGATGCCGCCAG TGGCGTGTCCGATGCTCCCAAAATATGTTCCACCGAAGGAGTACCGGTTT ATGCCGATACGGTATATAGAGGGCAGGTCAACAATGCTTGCCTATTCGGC GCCTCGATCGCCGGCGGTGTGCTCATGGAGGAACGGGTGGCCCTTTCCAA TGCCGAAGCCGAGCTATTGCTGGCGAAAAAAAAAGTCCAAGCGGCCGCTT CCGCCTTGGCGTCCGTGTACGGCCCAGATATCGCGTCTGGAAAACCTGAT CCTATTGTGGAGCTTAACGTTTGGGGGACGAGAATGACCACACTTCGTTC TACGCTACAGGCTTGTCCGGAGTCCGCGCTAGCCGCAAGGTTCGACGACA GCAAGTGGCCTTCCGATGGGAAGGACTTTGGGGTGATCGACTGCAACCCG GCAATCTTCGCCAAGGTATTGGATGTGCTGCGCTTGAGAAAGCGTGCCAA GTGGTCTCAACAGAAGAGGACCGCCAAAGTAATTCTTTCTCGTGTGGTGA TCACCGAGGGTGATCGCGCTTCCTTTGAGGAGTTCGTGGATATGTACTTT CCAGGCTGTAAGTCCTTCGTGATGGACTGGGTG
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Coding sequence (CDS) from alignment at H-elongata_contig54420:1765..3547-

>mRNA_H-elongata_contig54420.12822.1 ID=mRNA_H-elongata_contig54420.12822.1|Name=mRNA_H-elongata_contig54420.12822.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=570bp|location=Sequence derived from alignment at H-elongata_contig54420:1765..3547- (Himanthalia elongata Himel1 dioecious)
ATGCAACGTAAATCGATCAATGAGAAAGCTACTTTCACGACGGCTACTGC
TGCCTCCTCGAAAGAACTGCAGGCCACGCTACGCAATCGGAGATCATATT
ATTTGGATCACGCGTGGGACACCTTGGACGATGGCTGGAAGAAACTCGAA
AGGAAGATGGTCGCCATCGATATCACCAAGCCAGTGGCCTTGGACGGTGC
CTTGGTCCACCTGACTGAGCGTTGGGGGGTTGTATTTGAACGTTTGCCGC
TCTGTCTTCGAATCGATGGGCCAAAAACCCGTTAAATGCAACGTAAATCG
ATCAATGAGAAAGCTACTTTCACGACGGCTACTGCTGCCTCCTCGAAAGA
ACTGCAGGCCACGCTACGCAATCGGAGATCATATTATTTGGATCACGCGT
GGGACACCTTGGACGATGGCTGGAAGAAACTCGAAAGGAAGATGGTCGCC
ATCGATATCACCAAGCCAGTGGCCTTGGACGGTGCCTTGGTCCACCTGAC
TGAGCGTTGGGGGGTTGTATTTGAACGTTTGCCGCTCTGTCTTCGAATCG
ATGGGCCAAAAACCCGTTAA
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