mRNA_H-elongata_contig5440.12818.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: D8LF74_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF74_ECTSI) HSP 1 Score: 602 bits (1553), Expect = 3.300e-207 Identity = 344/619 (55.57%), Postives = 405/619 (65.43%), Query Frame = 1
Query: 1 GAEEIVERLVRESNNGVGVFYNRVGSISRDLSVLMASVLAEERLRDRYEGD---------------TENVLLISEEKTSDQP--------------------------------VDQMRDANEWRRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKS---------ARKAKSLARATPFEDSQPSSTLYEEGDS-------------DSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHPQPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVN----NGGFLHTCNPEEGWGPLPRGSVM 1638
GAE + E L ES VFYNRVG+I+RDLSVLMA+VLAEER+R+R G T+ L D V++M + + + ++D+ GL++LDAFAASGVRAL RYLTEVPGV+RVVANDYD +A+ +R+A CG G + E GDALD +Y+ARAGG+GTYD+IDIDP+G +A FLDA VQAV DGGLLC+TSTDMPVLSG QPE A+ RYGSVPTR GYH EMSLRILLHA + AA RQRRSI+PVLSVA+DHYVRVFVR+ RSPKAAL A+ SYVLQSE+CPSFF+ PVL+ K +RKA+ L+ +T + P+ E + D+ Q++ LGG CPETG L GGPIWSGPLHD++WV RAIA+AS G K + G R A +PRL AR R ESLL AVSREL DVPLFYNLR+MFATLGL+ PRREQVM ALE AGYRTSGMHKEPLA+KTNAPDAAVWDVLRCW R++PQPPP+R AG IL R Q I DA F G G R GGFLH NPE+ WGPL R SVM
Sbjct: 84 GAERVAELLAGESAGEGAVFYNRVGAINRDLSVLMANVLAEERVRERLAGKKRKKRQIPPTSRPSPTDGTLRSRSSLAHDMAQSGEARRSKVWGVRAFVKGALGRLSRGCWGVGVERMSNNKDQQDEPREDEDGLLILDAFAASGVRAL-RYLTEVPGVQRVVANDYDEAAINTIRQAAVQCGVGSKLEVHRGDALDTLYSARAGGIGTYDLIDIDPFGCAAGFLDASVQAVTDGGLLCVTSTDMPVLSGAQPEVAWTRYGSVPTRSGYHHEMSLRILLHAINTAAGRQRRSIQPVLSVAIDHYVRVFVRVSRSPKAALAAAQESTSYVLQSESCPSFFLRPVLSPKQQSPHIKTERSRKARRLSDSTDPSTALPAGAPPESKEQELERVTSGAGLGVDTQQSLPQGLGGVCPETGAGLMAGGPIWSGPLHDESWVTRAIAIASDGEKSLGG-DGADSRVAVPRPRLAARARAESLLRAVSRELLDVPLFYNLRDMFATLGLKKHPRREQVMGALEAAGYRTSGMHKEPLAVKTNAPDAAVWDVLRCWARDNPQPPPVREAGVAILRREMQSIGDADFDARRAGPGGSRREGVARGGGGFLHAHNPEQDWGPLARHSVM 700
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: D8LH70_ECTSI (tRNA (guanine(26)-N(2))-dimethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH70_ECTSI) HSP 1 Score: 321 bits (823), Expect = 1.730e-99 Identity = 209/534 (39.14%), Postives = 296/534 (55.43%), Query Frame = 1
Query: 40 NNGVGVFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSDQPVDQMRDANEW--RRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAG-KEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHPQPPPLRFA--GREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
+ G VFYN+V +RDLS+ + + AE+RL+++ E + + Q ++ + DA +W R + G+ +LDA AA+ +R++ RY+ E+PGV+ VV ND D +AV+ +R D + + GDA+ M+A+ A +D+ID+DPYG +A FLDA VQ V++GGLLC+T TDM VLSG PE YA+YGS+PT+G Y EM+LRI+LHA A A R RR + PVLS+++D YVR+FVR+F S A + A KA+YV QS C SFF+ PV + SL GD G CP+TG ++GGPIWS +H+ WV + V+ + QP ++R+ +L +VS EL DVPLFY+L +M +TL SPR + AL +AG+R S HKEP A+KT+APD VWDV+RCWV++HP + + G+ IL++ P D T + L RK + NPE WGP R
Sbjct: 53 SEGNEVFYNKVQEFNRDLSIHVIKLFAEKRLQEKTEKALRKTRKREGAEFTAQDLEGL-DATDWSQRAADSASTDGIQILDALAATALRSI-RYVKEIPGVKEVVVNDLDEAAVQAAQRNIDFNQVDVSKIRVQQGDAISAMHASSAAKQ-RFDVIDLDPYGSAAPFLDAAVQCVEEGGLLCVTCTDMGVLSGGHPETCYAKYGSMPTKGKYLHEMALRIVLHALEAQANRYRRHVVPVLSLSIDFYVRLFVRVFTSA-AEVKKACTKAAYVHQSLGCGSFFLHPVGKMSNNNYNPSLTT----------------GD------------GLCPQTGKRFKVGGPIWSPAIHNMEWVRLLLDR-------------VQKNRGPYQPS--TKKRIHGMLTSVSEELPDVPLFYSLPDMCSTLHCN-SPRMIDMQAALVNAGFRVSQQHKEPQAVKTDAPDDVVWDVMRCWVKKHPVSDKRKTSSPGQAILSKDPNHQADFTVPSGLWQ--RKTATR-----YQQNPEPYWGPKSR 531
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: F0Y1C9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1C9_AURAN) HSP 1 Score: 314 bits (804), Expect = 1.180e-98 Identity = 195/457 (42.67%), Postives = 256/457 (56.02%), Query Frame = 1
Query: 268 VLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP-------QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGP 1617
VLDA AA+G+R++ RY EVPGVR+VVAND D A R GA EA GDA+D M A+R G +D+ID+DPYG A FLDA VQAV DGGLLC+TSTDM VLSG PE +A+YGS+PT+ + E +LRIL+HA AAAA+ +R + PVLS+++D YVRVFVR+++ P A + + K ++VLQS CPSF++ P LAR+ E ++ L+ + A + P C ETG +IGGPIWS PLHD WV + + G L R+ +L AVS EL DVPL+Y L ++ + L SP+ +V AL AGYR S H+EP A+KT+AP +WDV RCWV++HP +P R A +ILA P + +A F T + NPEE WGP
Sbjct: 3 VLDALAATGLRSI-RYAKEVPGVRKVVANDVDADAAAACGRNAAENGAADICEAHCGDAVDFMTASRGKGSQGFDVIDLDPYGSCAPFLDAAVQAVNDGGLLCVTSTDMTVLSGNYPEVCFAKYGSMPTKAKHLHEFALRILVHAIEAAAAKYQRHVVPVLSLSIDFYVRVFVRVYKRP-AEVKKSAAKRAFVLQSAGCPSFYLQP------------LARSLDREGGHAAALLHRK-------ATVAPA--FCGETGAPFKIGGPIWSAPLHDPEWVLAGLDRVAAG----------------VDAHLSTTERIHGMLTAVSEELLDVPLYYTLPDLCSALHCA-SPKMAEVRAALTHAGYRVSQHHREPDAIKTDAPPRVLWDVFRCWVKKHPVSEKRLAEP---RSAAAKILATAP--VLEANFATTAAMRAKATKARR----WAPNPEEHWGP 410
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A836C8Z8_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Z8_9STRA) HSP 1 Score: 307 bits (786), Expect = 1.440e-94 Identity = 205/546 (37.55%), Postives = 286/546 (52.38%), Query Frame = 1
Query: 25 LVRESNNGVGVFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSDQPVDQMRDANEW--RRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCG--AGKEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASG--GGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP------QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
L ESN VFYN+V +RDLS+ + AE W R E +G+V+LDA AA+ +R++ RY E+PGVR+VVAND D +AVE R+ + AGK + GDA +MY R+ +D+ID+DPYG +A F+D VQAVK GGLLC+TSTDM VL G EA +A+YGS+PT+G Y EM+LRILLH ++A + +R + PVLS+++D YVR+FVR+F SP A A + YV+QS TC SFFV P + R + K AV+ P CP+TGG++++GGP+W+ P+HD+ WV +A GG P + R++S+L VS EL DVPL YNL ++ + L +P A+ +AGYR S HK+P A+KT+APD +WD++RCWV+ HP +P F +IL++ P+ D + + G +R+ H NPE WGP R
Sbjct: 2 LFSESNE---VFYNKVQVFNRDLSIHVIKYFAE---------------------------------TNWSARAAESAKSNGIVILDALAATALRSI-RYTKEIPGVRKVVANDLDAAAVEAARKNAEFNNVEAGK-LDVLQGDATLLMYTRRSHEQ-QFDVIDLDPYGSAAPFVDGAVQAVKSGGLLCVTSTDMAVLGGANTEACFAKYGSMPTKGKYLHEMALRILLHLLDSSATKYKRHVVPVLSLSIDFYVRIFVRVFDSPSQAKA-ATARRGYVMQSTTCSSFFVQP-MCRTAGNNLKP--------------------------AVMIPEAAVCPQTGGHMKLGGPLWTAPIHDEQWVLALLARIERYKGGTPPATAP-----------------RIKSMLTTVSEELFDVPLHYNLADICSHLHCT-APPLPTFRAAVINAGYRISAQHKDPGAIKTDAPDDVIWDIMRCWVKTHPVSAKRLKPDTAAF---KILSKEPKHEAD---FSPVQGSMLRRVSR----FHQ-NPEPFWGPKSR 451
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: W7T9F0_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9F0_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.750e-94 Identity = 221/557 (39.68%), Postives = 301/557 (54.04%), Query Frame = 1
Query: 7 EEIVE--RLVRESN------NGVGVFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSDQPVDQMRDANEW--RRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEA-RYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLV---ARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHPQPPPLR---FAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
EEI E L++E +G VFYN+V ++RDLS++M + AE RLRD+ E L E T +Q Q+ D + W R E + GLVVLDA AASG+R++ RY EVPG++++V ND + AVE R A + G+A VMY A +D+IDIDPYG +A F+DA VQAV +GGLLC+T TD+ VL+G PE + +Y ++PT+ Y EM++RI+L A A R RR I P+LSV +D Y+RVFVR+F SP A + A K +YV QS C SF++ ++A K A ++ S PP+ CPETG R+GGPIWS P+HD WV A+ A D AE + L R+ LL AVS EL DVPL Y L++M TL PR + V AL +AGYR S HKEP A KT+AP A +WD++RCWV++HP P + +ILA+ P++ + ++ L K+ V+ + NPE WGP +
Sbjct: 58 EEIPEGFMLIKEGQASMLFPSGNEVFYNKVQVLNRDLSIMMLRLFAERRLRDK-----EAKRLKKEGLTPEQVTAQLADVD-WTARVAETAAEEGLVVLDALAASGLRSI-RYFKEVPGIKKIVVNDLEEPAVEQAHRNVAYNRVDPTRVAPQQGNATLVMYQ-HAESREQFDVIDIDPYGSAAPFMDAAVQAVANGGLLCVTCTDLAVLNGNHPEVCWGKYRAMPTKARYMHEMAVRIVLQALETQANRYRRYIVPLLSVGIDFYLRVFVRVFTSP-AEVKKASLKMAYVHQSLGCGSFYL------QTAGKYSGDAGNGSYQAST--------------GPTCPPV---CPETGAAFRLGGPIWSAPMHDMEWVLEALGRAE----------EQADADAEAKTGLAPLPTTERMVGLLTAVSEELVDVPLHYTLQDMAGTLHCT-CPRVDDVKAALINAGYRVSSQHKEPRAFKTDAPPAVMWDIMRCWVQKHPVGPRGQKESSPAAKILAKAPKLQANFSWPPELLAP--KKKVSR----YPPNPEAFWGPKSK 565
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A7S3ZTX3_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTX3_9STRA) HSP 1 Score: 292 bits (747), Expect = 6.180e-88 Identity = 201/546 (36.81%), Postives = 285/546 (52.20%), Query Frame = 1
Query: 55 VFYNRVGSISRDLSVLMASVLAEERL---RDRYEG-DTENV----LLISEEKTSDQPVDQMRDANEWRRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLA-------------RKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP----QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGP 1617
VFYN+V +RD+SVL+ ++ A+ R R+R G D +E + + + +E R + GL VLDA AA+G+R++ RY EVPGV++V++ND + A + + G EA GDA+ M +R YD+ID+DPYG +A FLD VQA+ DGGLLC+TSTDM VLSG PE YA+YG++PT+ + E +LR+LLHA A+A R R I PV+S+++D Y+RVFVR+++SP +A VLQS CPSF++ P+ + + RK + R +AV P RC ETG +IGGPIWS P+HD WVA A+ + AE L R+ + AVS EL DVPL+Y + ++ TL +P+ +V AL+ AGYR+S H++P A+KT+AP +WDV RCWV++HP + A +IL+ P I +A F T ++ NPEE WGP
Sbjct: 72 VFYNKVQVFNRDVSVLVMALFAQWRYIEKRERQAGADARKAGGDGAAAAEAERARLYALSAAELDELLREDAA-TGGLRVLDALAATGLRSV-RYAKEVPGVKKVISNDIEAEAAKKCQENATSNGCESLVEAVCGDAVAHMINSRGD---PYDVIDLDPYGSAAPFLDGAVQAISDGGLLCVTSTDMTVLSGGYPEVCYAKYGAMPTKAKHLHEYALRVLLHAIEASATRYARHIVPVVSLSIDFYIRVFVRVYKSPSNVKHTIGRRA-LVLQSAGCPSFYLQPLGSPTQRDGGYTCGRLHEPPRKINQMGRRAQRRAEXXXXXXXXXXXDFDPEAVAP---ARCAETGAAFKIGGPIWSAPIHDAEWVAAALDRVA----------------AECDEHLSTTERIHGVFTAVSEELMDVPLYYTIPDICKTLHCA-APKLCEVRAALQHAGYRSSQSHRDPDAIKTDAPPRVLWDVFRCWVKKHPIAAKRLEDKDSAAAKILSVEP--ILEANFSTTAALRQKQTKARR----WAPNPEEYWGP 585
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A5D6XXW9_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXW9_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.830e-85 Identity = 187/553 (33.82%), Postives = 281/553 (50.81%), Query Frame = 1
Query: 22 RLVRESNNGV------GVFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSD-QPVDQMRDANEWRRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEA--------RYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHPQPPPLR---FAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
+++RE N + VFYN V ++RDLS+ + S A R R++ + + ++ +D P + D + + SG+ + +A +ASG+R++ RY ++PGV+ ++ ND D +AVE ++R EF DA +VMY R +D++D+DPYG ++ FLD VQ+V +GGLLC+T TDM VLSG PE ++RYG++P + Y EM+LR +L + AAA + R I P+ S ++D YVRVFVR+F+SP + +A K SYV Q +C SF + P+ +A F S+ P +G C + GG ++ GPIWS P+HD+ V R +++R + + + R+ LL +S EL D PL Y L + TL +PR EQ+ AL AGY S HK P A+KTNAP+ VWD++RCWV++HP AG+ ILA+ P+ + +F A + + L NPE WGP R
Sbjct: 22 KIIREGNGVMIFPAQNQVFYNNVQVLNRDLSIAVISDFARTRAREKLLKQQKRAAAAASQEGADFTPKEYSEDDIDAYLEQNAATSGVKIFEALSASGLRSI-RYFQQIPGVKSILVNDMDPAAVESIKR-------NVEFNELPLDRVIPNEDDATNVMYQHRK-DADQFDVVDLDPYGSASIFLDGAVQSVSNGGLLCVTCTDMAVLSGKNPEVCFSRYGAIPNKSHYLHEMALRTVLQSIEAAANKYARHIVPIASCSIDFYVRVFVRVFKSP-VNVKLAMTKLSYVFQCVSCESFHLQPL----------GVATGNTFHASRG-----------------PVVGPECDQCGGKHKMAGPIWSAPIHDRDVVLR-----------------IRERVSASESEFPTKERLHGLLTTLSEELVDTPLHYTLPGLSKTLHCT-NPRMEQMQGALRHAGYEASQFHKVPEAVKTNAPNDVVWDIMRCWVKKHPVTKKREGENSAGQRILAKEPKFEANFSFRRAAAHEKERAL------RFPQNPEPNWGPKAR 513
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A2P6TWL9_CHLSO (tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TWL9_CHLSO) HSP 1 Score: 281 bits (718), Expect = 4.670e-84 Identity = 192/525 (36.57%), Postives = 270/525 (51.43%), Query Frame = 1
Query: 55 VFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSDQPVDQMRDANEWRRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKEFEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP-QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
VF+N ++RD+S+ + +R ++ G + +K ++Q V + A E G+ VL+ AASG+RA+ RY EV GVR VVAND D S VE M+R + G + GDA VM G +D +D+DPYG + LD+ VQAV +GGLL +T+TDM VL G EA YA+Y S P Y EM+LRILL + AAR +R I P+LS+++D Y+RVFVR++ S A + + YV QS C S++ V R+ + S+ A V P + +C ETG ++GGP W+ PLHD WVA +A +D+ L +V S+L VS EL DVPL++NL +M TL +PR E AL +AGYR SG H PL +KT+AP +WD++RCWV+EHP +PP A +IL++ P++ D + A +++ V NPE WGP PR
Sbjct: 35 VFFNPAQVVNRDMSLSVLKYFIAQREKEIESGAAKKAF----QKAANQGVGKAAGAKAPVAGE-----GVRVLEGLAASGLRAI-RYAKEVEGVREVVANDLDPSVVESMKRNIEHNDIGHKVTPSVGDARLVMLQ----NSGLFDAVDLDPYGSPSILLDSAVQAVSEGGLLLVTATDMAVLCGNNGEACYAKYASYPLHKPYCHEMALRILLASLEQHAARYKRYIVPILSLSIDFYIRVFVRVYTSA-AEVKNCATRLGYVWQSTGCDSYYWQRV-GRRLLKGGNSVKYAP---------------------GVGPAVPQQCAETGSGFQLGGPFWAEPLHDPQWVAGLLAQVK------------RDKAI-----LPGYNKVHSILTNVSEELNDVPLYFNLHDMCKTLRTS-APRSEVFRSALINAGYRVSGTHANPLGVKTDAPWDVIWDIMRCWVKEHPVKPPQPGSAAEKILSKEPELKADFSRAQAAVSKAKQKGVTR----FPQNPEANWGPKPR 500
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A2P6V403_9CHLO (tRNA (guanine(26)-N(2))-dimethyltransferase n=2 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V403_9CHLO) HSP 1 Score: 279 bits (713), Expect = 4.660e-83 Identity = 189/468 (40.38%), Postives = 253/468 (54.06%), Query Frame = 1
Query: 247 QDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCG--AGKEFEARYGDA----LDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMR-ALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP-QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
Q G+ VL+ AASG+RA+ RY TE+ GV VVAND D S VE M+R G A ++ GDA L Y +D +D+DPYG + LD+ VQAV +GGLL IT+TDM VL G EA YA+Y S P Y EM+LRILL + AAR +R I PVLS+++D Y+RVFVR++ S VA + YV QS C SF+ V R++ + S+ Y+ G P + +CPETG N +GGP WS PLHDQ WVA G+ ++ + L A ++ S+L AVS EL D PL++NL ++ TL R +P R +V+R AL +AGYR SG H PL +KT+AP + VWD++RCWV++HP + P A ILA+ P++ D + R++ V FL NPE WGP PR
Sbjct: 96 QPGEGVRVLEGLAASGLRAI-RYATELEGVWEVVANDLDPSVVESMKRNIAFNGGVAAEKVTTSVGDARLACLQNSYL--------FDAVDLDPYGSPSKLLDSAVQAVNEGGLLLITATDMAVLCGNHGEACYAKYASYPLHKPYCHEMALRILLASIEQHAARYKRYIVPVLSLSIDFYIRVFVRVYTSAAEVKNVA-TRLGYVWQSTGCDSFYWQAV-GRRTTKGGNSVK--------------YQPG-------YGPAVSEKCPETGSNFTMGGPFWSQPLHDQEWVA-----------------GLLEQIRADKANLPAFDKLHSILTAVSEELPDAPLYFNLHDVCKTL--RTTPPRSEVLRSALVNAGYRVSGSHANPLGVKTDAPWSVVWDIMRCWVQQHPVKKPAPGSAAESILAKEPELKADLSRAAQAVSKARQKGVAR--FLP--NPEANWGPKPR 508
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Match: A0A421ETP8_9STRA (tRNA (guanine(26)-N(2))-dimethyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421ETP8_9STRA) HSP 1 Score: 277 bits (709), Expect = 5.770e-83 Identity = 184/545 (33.76%), Postives = 275/545 (50.46%), Query Frame = 1
Query: 22 RLVRESNNGV------GVFYNRVGSISRDLSVLMASVLAEERLRDRYEGDTENVLLISEEKTSDQPVDQMRDANEWRRNEKQDKSGLVVLDAFAASGVRALSRYLTEVPGVRRVVANDYDTSAVELMRRAGDLCGAGKE-FEARYGDALDVMYAARAGGLGTYDIIDIDPYGESASFLDAGVQAVKDGGLLCITSTDMPVLSGVQPEAAYARYGSVPTRGGYHQEMSLRILLHATSAAAARQRRSIKPVLSVAVDHYVRVFVRIFRSPKAALVVARNKASYVLQSETCPSFFVVPVLARKSARKAKSLARATPFEDSQPSSTLYEEGDSDSGQAVIPPLGGRCPETGGNLRIGGPIWSGPLHDQAWVARAIALASGGGKPISRVTGVKDRQAEKQPRLVARRRVESLLEAVSRELEDVPLFYNLREMFATLGLRFSPRREQVMRALEDAGYRTSGMHKEPLALKTNAPDAAVWDVLRCWVREHP---QPPPLRFAGREILARGPQVITDATFVTALTGDGRKRLVNNGGFLHTCNPEEGWGPLPR 1626
+++RE N + VFYN V ++RDLS+ M S A R R++ + + E S P D + E E ++SG+ + +A +ASG+R++ RY ++PGV+ ++ ND D +AVE ++R + DA DVMY R +D+ID+DPYG ++ FLD+ VQ+V +GGLLC+T TDMPVLSG QPE ++RYG++P + Y EM+LR++L ++A R R I P+ S ++D YVRVFVR+++SP + A K S+V Q C SF + P+ ++ + S+ P +G C + G ++ GPIWS PLH +R + L ++DR + + R+ LL +S EL D PL Y L + TL +PR Q+ A+ AGY S HK P A+KT AP+ +WD++RCWV++HP AG ILA+ ++ +A F + G K NPE WGP R
Sbjct: 22 KIIREGNGVMIFPAENQVFYNNVQVLNRDLSISMISEFARTRAREKLVKEARKAANAAGEGASFVPKDYTDEEIERHLAETAEESGIKIFEALSASGLRSI-RYFQQIPGVKSILVNDMDPAAVETIKRNVTFNELPLDRVIPNEADATDVMYNHRK-PADQFDVIDLDPYGSASIFLDSAVQSVTNGGLLCVTCTDMPVLSGKQPEVCFSRYGAIPNKSNYLHEMALRMVLQTIESSANRYARHIVPIASCSIDFYVRVFVRVYKSP-VNVKKAMTKLSHVFQCVQCDSFHLQPL----------GVSSGNTYHASRG-----------------PVVGQECDQCKGKYKMAGPIWSAPLH-----SRDVVLK------------IRDRVEKTTTEFPTKDRLHGLLTTISEELVDAPLHYTLPGLCKTLHCT-NPRMAQIQGAIRHAGYEASQFHKVPDAIKTTAPNDVIWDIMRCWVKKHPLNKNRDGQVSAGNRILAKESKI--EANFSSRRPGPNDKTKA----LRFPLNPEPNWGPKAR 512 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5440.12818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5440.12818.1 >prot_H-elongata_contig5440.12818.1 ID=prot_H-elongata_contig5440.12818.1|Name=mRNA_H-elongata_contig5440.12818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=546bp GAEEIVERLVRESNNGVGVFYNRVGSISRDLSVLMASVLAEERLRDRYEGback to top mRNA from alignment at H-elongata_contig5440:4798..7759+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5440.12818.1 ID=mRNA_H-elongata_contig5440.12818.1|Name=mRNA_H-elongata_contig5440.12818.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2962bp|location=Sequence derived from alignment at H-elongata_contig5440:4798..7759+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5440:4798..7759+ >mRNA_H-elongata_contig5440.12818.1 ID=mRNA_H-elongata_contig5440.12818.1|Name=mRNA_H-elongata_contig5440.12818.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3276bp|location=Sequence derived from alignment at H-elongata_contig5440:4798..7759+ (Himanthalia elongata Himel1 dioecious)back to top |