prot_H-elongata_contig54167.12787.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54167.12787.1
Unique Nameprot_H-elongata_contig54167.12787.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length151
Homology
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BLAST of mRNA_H-elongata_contig54167.12787.1 vs. uniprot
Match: D7FMR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR0_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.150e-41
Identity = 84/113 (74.34%), Postives = 100/113 (88.50%), Query Frame = 0 
Query:    1 FIPQAEKAKHEEMAAFQRAGELALQNIDKSRQATKEDGLRQHRAFSHQRQRITRLRMQEVDQERARNQLESERREAKLKAEKEALSRACAAEAEELGNAWAMVEAAAGFVPPG 113
            ++ + E+AK  EMAAFQRAGE ALQN+++SR+AT +DGLR H+AF +QRQRITRLRM+EVDQERARNQ+ESE+REA+LKAEKEALSRAC  EA ELGNAWA+VEAAAGF P G
Sbjct:  281 YLSEVEEAKRAEMAAFQRAGEAALQNMERSRKATTDDGLRLHKAFLNQRQRITRLRMEEVDQERARNQVESEKREARLKAEKEALSRACEQEAAELGNAWAVVEAAAGFAPEG 393
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BLAST of mRNA_H-elongata_contig54167.12787.1 vs. uniprot
Match: A0A6H5KY16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY16_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 2.910e-11
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:   68 QLESERREAKLKAEKEALSRACAAEAEELGNAWAMVEAAAGFVPPG 113
            Q+ESE+REA+LKAEKEALSRAC  E  ELGNAWA+VEAAAGF P G
Sbjct:    6 QVESEKREARLKAEKEALSRACEQEEAELGNAWAVVEAAAGFAPEG 51
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54167.12787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMR0_ECTSI1.150e-4174.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KY16_9PHAE2.910e-1178.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 52..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54167contigH-elongata_contig54167:370..1722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54167.12787.1mRNA_H-elongata_contig54167.12787.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54167 370..1722 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54167.12787.1 ID=prot_H-elongata_contig54167.12787.1|Name=mRNA_H-elongata_contig54167.12787.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=151bp
FIPQAEKAKHEEMAAFQRAGELALQNIDKSRQATKEDGLRQHRAFSHQRQ
RITRLRMQEVDQERARNQLESERREAKLKAEKEALSRACAAEAEELGNAW
AMVEAAAGFVPPGGGDYGEDGDNIHELTRAVVTPGGVGGEDRGGGATENG
E
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