prot_H-elongata_contig54056.12776.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig54056.12776.1
Unique Nameprot_H-elongata_contig54056.12776.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length425
Homology
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BLAST of mRNA_H-elongata_contig54056.12776.1 vs. uniprot
Match: D7FTY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTY2_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 2.070e-104
Identity = 188/399 (47.12%), Postives = 265/399 (66.42%), Query Frame = 0 
Query:   24 FMSLGRGTTLPIGQGGRLQLQIPKATATMKFTTQWIDSCHIAIHQQRVASAGLDGDNLEVSGGRGLHDDYLESIGLALEVDEALGQANLVHDEERGE-QGPYLIEVIIPEIFSLDILLASGSVSVAKKMKGTCRIRLEEGNIEVGIVRGEDIVLSTNRGLVHVDELEGKVDITATTNVSARLINGSKVQIAAAG-DDTVVKVGGLYSSGAQISSTGDVTVSASHGLLSVNTKGSQXXXXXXXXXXXXXXXTDQGDARIHVDTLEDGTNNYVRQVLSDTGDVSLSVSQEVRANLEIKGDIGELPLSFEGHAEAHQAVGTIDRENIKTSEEA-YGSAYSTTSINDGRGKIDLAGARNQSLRQYFKTSPAKRTP-PTLSVSSVGGTIRMETLSWADNVVRKF 418
            F S G   T+PIGQGGRL + + KA A +K TTQWIDSC + + +     AG DG +L  +G + +  + L++ GL+L  DEA  Q  L HD+E    +  YLIE ++PE+FS+++L + G+VSV+KK+KG C++RL+ G+I VGIVRGE I LST RG + VDELEG VDITAT+NV ARLING+KV+I   G DD  V VG LYSSGA I+S G+V VS+ HG ++V+T  +                  +G A +H+D LE+GT +++R   S+ GD+++S+SQ+V A++EI GD+ ++P +F+G  +  +AVG+I    ++ S    +GS   T+S + G GKID+ GAR QSLRQYF  + A  +  P LSV + GG + +ETLSWADN+ RKF
Sbjct:   36 FTSSGHAQTIPIGQGGRLVIDMAKAAAVIKVTTQWIDSCSVEVSR---LPAGSDGRSLAGAGAKEVLSN-LDAAGLSLHADEAHAQVTLAHDKEHPSVEDTYLIEAVVPELFSVELLASHGNVSVSKKIKGDCKVRLDRGDINVGIVRGETIRLSTGRGHIKVDELEGNVDITATSNVRARLINGAKVKINTTGHDDPSVNVGALYSSGAHITSAGNVGVSSCHGRIAVHTADTSGSVNLSSVSGTAHVSAGEGGATVHLDVLEEGTASHIR---SNGGDINVSLSQQVDADVEITGDVVKVPSTFKGDTQRGRAVGSIYSAQVEPSRATRHGS---TSSTDAGGGKIDMVGARGQSLRQYFPGNTATTSVRPKLSVVAEGGCVVVETLSWADNITRKF 424
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig54056.12776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTY2_ECTSI2.070e-10447.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34094FAMILY NOT NAMEDcoord: 63..414

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig54056contigH-elongata_contig54056:531..3243 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig54056.12776.1mRNA_H-elongata_contig54056.12776.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig54056 362..3265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig54056.12776.1 ID=prot_H-elongata_contig54056.12776.1|Name=mRNA_H-elongata_contig54056.12776.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=425bp
MIVSAIMPQLPRACFRQSLGIWRFMSLGRGTTLPIGQGGRLQLQIPKATA
TMKFTTQWIDSCHIAIHQQRVASAGLDGDNLEVSGGRGLHDDYLESIGLA
LEVDEALGQANLVHDEERGEQGPYLIEVIIPEIFSLDILLASGSVSVAKK
MKGTCRIRLEEGNIEVGIVRGEDIVLSTNRGLVHVDELEGKVDITATTNV
SARLINGSKVQIAAAGDDTVVKVGGLYSSGAQISSTGDVTVSASHGLLSV
NTKGSQGDVTLSSVNGAVQVSTDQGDARIHVDTLEDGTNNYVRQVLSDTG
DVSLSVSQEVRANLEIKGDIGELPLSFEGHAEAHQAVGTIDRENIKTSEE
AYGSAYSTTSINDGRGKIDLAGARNQSLRQYFKTSPAKRTPPTLSVSSVG
GTIRMETLSWADNVVRKFTQDVDK*
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