mRNA_H-elongata_contig11619.1277.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11619.1277.1
Unique NamemRNA_H-elongata_contig11619.1277.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: D7FLU2_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLU2_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 7.630e-52
Identity = 91/110 (82.73%), Postives = 98/110 (89.09%), Query Frame = 1 
Query:  466 KKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLEGIEEGEAFEQYCKKVEASAEWGGQVELQ 795
            K+EG  DPRI EM+ L  QVAPRGFRVSEIKADGHCLYRAVA+QLSLTGRRP LTEESY LMRQEAARELRSSP EYLPFL+G+EEGE F++YC KVE SAEWGGQVELQ
Sbjct:  161 KEEGGPDPRIVEMDVLKTQVAPRGFRVSEIKADGHCLYRAVADQLSLTGRRPGLTEESYPLMRQEAARELRSSPSEYLPFLDGLEEGEEFDKYCVKVEGSAEWGGQVELQ 270
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: K8YVN6_NANGC (Otu domain-containing protein 6b n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YVN6_NANGC)

HSP 1 Score: 102 bits (255), Expect = 1.300e-22
Identity = 111/256 (43.36%), Postives = 143/256 (55.86%), Query Frame = 1 
Query:   31 DEVKARHKKELKAQEGSGRKLLKQANKSKTKKAEAESMIAKMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENGDDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAXXXXXXXXXXXXXXXXXXXXXKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLEGIEEGEA--FEQYCKKVEASAEWGGQVEL 792
            +E++ RHK E++  EG  R LLK+A K   KKAE +  +A+M+ + +ERH REL         KF A   G      GRG  E G  E  +D   G +AA K                +KR KAXXXXXXXXXXXXXXXX     K EG    R  EM  + + ++P G RV E+ ADGHCLYRAVA QL   G    +  + Y  +R+ AA+ + S P ++LPFL G EEGEA   E Y   VE +AEWGG++E+
Sbjct:   20 EEMRKRHKAEVRQLEGKTRALLKKAPK--PKKAEVQGEVARMERDMEERHARELG--------KFAAAPNG------GRGKGEEGESEEXEDG--GATAAEKVA--------------RKRDKAXXXXXXXXXXXXXXXXARALAK-EGVVSLRDLEMGQILSLLSPLGLRVQEVPADGHCLYRAVAHQLEHQG----IPSQGYPEVRRSAAQYILSHPEDFLPFLAGGEEGEAAGLEAYVHTVEDTAEWGGELEI 238
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: A0A024UJP0_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJP0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 7.720e-19
Identity = 83/262 (31.68%), Postives = 129/262 (49.24%), Query Frame = 1 
Query:   22 QAVDEVKARHKKELKAQEGSGRKLLKQANKSKTKKAEAESMIAKMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENGDDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAXXXXXXXXXXXXXXXXXXXXXKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLE-----GIEEGEAFEQYCKKVEASAEWGGQVEL 792
            ++V ++K RHK EL+  +G  + L K+  K    K E E  +A+++  T  RH  EL+     +     APDV  ++A V                                     +E+   R +     XXXXXXXXXX       + +     R  E++A+  Q+      + EI +DGHC+Y AVA+QL LTGR   +T+ +YL +RQ+ A  +R+   ++LPF+E     G+   + F+ YCK+VE S++WGGQ+EL
Sbjct:    2 ESVGQMKQRHKLELRDLQGQTKALAKKLKKDNLSKKEIEQRVAELEKSTASRHATELQTIMQALKVSEEAPDVTPASAPVVV-----------------------------------EEKSNARLEKAQRKXXXXXXXXXXRQDRIAFESQNVVSQRQIEIDAISNQLTSLNLVIKEIPSDGHCMYHAVADQLKLTGRLATVTD-AYLALRQKTAAYMRAHSDDFLPFVELNYDSGVPIQDQFDSYCKRVEESSDWGGQLEL 227
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: A0A835Z5X2_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5X2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.530e-18
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 1 
Query:  484 DPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPE------LTEESYLLMRQEAARELRSSPGEYLPFLEGIEEGEAFEQYCKKVEASAEWGGQVEL 792
            D R  E+EAL A + PRG  V+ I++DG+CLYRAVA QL++     +        E+ +  +R+ AA  LR    E++PF+E  +EG A+E YC  VE SAEWGG+VEL
Sbjct:  156 DARTVELEALSANLLPRGLAVAPIRSDGNCLYRAVAHQLAVAAHGGDGAAAAAAAEDGHAGLRRVAAAHLREHAAEFMPFVEACDEG-AYEAYCALVEGSAEWGGEVEL 263
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: W4FCW5_9STRA (OTU domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCW5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 5.890e-18
Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 1 
Query:  490 RIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLE-----GIEEGEAFEQYCKKVEASAEWGGQVEL 792
            R  E +A+ AQ+   G  V EI +DGHC+Y AVA+QL LT R P  + ++Y+ +RQ+ A  LRS   +++PF+E      I   + FE YC +VEA+A+WGGQVEL
Sbjct:  125 RQIESDAIAAQLTSLGLIVKEIPSDGHCMYHAVADQLKLTRRLPFPSSDAYIPLRQKTAAYLRSHADDFVPFVELDYASDIAIQDQFESYCARVEATADWGGQVEL 230
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: A0A1Y1HXK5_KLENI (OTU (Ovarian tumor)-like cysteine protease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HXK5_KLENI)

HSP 1 Score: 90.1 bits (222), Expect = 4.240e-17
Identity = 88/266 (33.08%), Postives = 129/266 (48.50%), Query Frame = 1 
Query:   31 DEVKARHKKELKAQEGSGRKLLKQANKS-----KTKKAEAESMIAKMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENGDDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAXXXXXXXXXXXXXXXXXXXXXKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFL-------EGIEEGEAFEQYCKKVEASAEWGGQVEL 792
            +EV ARH+KE+KA +G   +L KQA K      K  K   +  IAK+DA  K+R  +EL A              G+  AE   G       +  DD ++ + A A      S+  +    + QKR  A                     ++ G    R+ E + L  +++P G  + EIK DGHCLYRAV +QL L G+   L ++ YL +R+ AA  +R+   ++LPF+       EG  + + FE YCK+VE +A WGGQ+EL
Sbjct:   91 EEVLARHRKEIKALQGKEIELKKQAAKGSKAAQKAAKHAVDEQIAKLDASLKKRQAKELAAL-----------GFGEKEAESAEG-------KKPDDMDTLIRAIA----GTSVGPQRGPSKAQKRRDAKMKQEVEREQRIQQ-------EQSGVVSERVIENQRLAEKLSPLGLALKEIKPDGHCLYRAVEDQLQLQGQPSNLIQD-YLSLRKLAAVYMRAHKDDFLPFVTEHATEHEGDPDAQ-FEAYCKEVEETATWGGQLEL 325
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: A0A7S0NT02_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NT02_9EUKA)

HSP 1 Score: 88.6 bits (218), Expect = 5.540e-17
Identity = 46/106 (43.40%), Postives = 70/106 (66.04%), Query Frame = 1 
Query:  490 RIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFL-----EGIEEGEAFEQYCKKVEASAEWGGQVEL 792
            R  EMEAL A++AP G RV EI ADGHCLYR++A+Q+   G +      ++   R++AA  +RS P ++LP+L     EG+ + ++ ++YC  +E  AEWGGQ+E+
Sbjct:  147 REVEMEALMAKLAPLGLRVLEIPADGHCLYRSLADQMQRHGEQTA----TFQHCRRDAAGYIRSHPADFLPYLVAEGAEGVADAQSVDEYCDVIEGKAEWGGQLEI 248
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: I0YST0_COCSC (Cysteine proteinase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YST0_COCSC)

HSP 1 Score: 86.3 bits (212), Expect = 1.490e-16
Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 
Query:  475 GEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTE-ESYLLMRQEAARELRSSPGEYLPFL---EGIEEGEAFEQYCKKVEASAEWGGQVEL 792
            G++D R+ E   L A +AP G  V  I ADGHCLYRAV EQL   G    L     Y  +R +AA  +R+ P ++LPF+   +G + G AFE YC  VE SA WGGQ+EL
Sbjct:   96 GDSD-RVIEERELAATLAPLGLAVRSIPADGHCLYRAVEEQLGAAGCEELLPPPRDYWAVRAKAAAYMRTHPDQFLPFIPQEDGEDVGAAFEAYCVAVENSAAWGGQLEL 204
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: UPI0008FD536B (OTU domain-containing protein 6B n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD536B)

HSP 1 Score: 86.3 bits (212), Expect = 3.840e-16
Identity = 87/278 (31.29%), Postives = 129/278 (46.40%), Query Frame = 1 
Query:    1 MDVLRDDQA-VDEVKARHKKELKAQEGSGRKLLKQANKS-----KTKKAEAESMIAKMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENGDDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAXXXXXXXXXXXXXXXXXXXXXKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLS-LTGRRPELTEESYLLMRQEAARELRSSPGEYLPFL--EGIEEGEA-----FEQYCKKVEASAEWGGQVEL 792
            +D  ++ QA +DEV +RH+KE+K  +    +L K A K      KTKK + E  I+++ A+ KE+H +EL A                    +G  GA     + GD     + +  + +  V +  +    R  K AK                      ++       + E E L  ++ P G  V+EIK DGHCLYRAV +QL+ LTG     +   Y  +RQ  A  +R    ++LPF   EG EE E      FE+YC+ VE++A WGGQ+EL
Sbjct:   17 VDTSQEQQATIDEVLSRHRKEIKQLQNKETELKKAAAKGSKAEQKTKKKQVEEEISRLSAKLKEKHAQELTA--------------------LGYSGANETDNKKGD-----IDSLVRAIAGVGVAAQPEHSRTSKSAKRREKRAQQEAAREQRIQE----EQSKMTSDNMVEKERLERKLQPLGLTVNEIKPDGHCLYRAVEDQLAHLTGG---ASPYDYQKLRQMVAAHMREHATDFLPFFLSEGEEESEGSVEEQFEKYCRDVESTAAWGGQLEL 262
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BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Match: A0A6G0X599_9STRA (OTU domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X599_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.340e-15
Identity = 76/262 (29.01%), Postives = 122/262 (46.56%), Query Frame = 1 
Query:   22 QAVDEVKARHKKELKAQEGSGRKLLKQANKSKTKKAEAESMIAKMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENGDDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAXXXXXXXXXXXXXXXXXXXXXKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQLSLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLE-----GIEEGEAFEQYCKKVEASAEWGGQVEL 792
            + V + K RHK EL+A + S + L+K+       K E ES + +M+ E K RH  EL+   SK       P++    AEV                   +   A     +    R+RD++ Q+  KA                     K++ E D    +++AL          + E+ +DGHC+Y A+A+QL      P ++ ES++ +R   A+ LRS   ++LPF+E      +   + FE+YCK+VE S++WGGQ+EL
Sbjct:    2 ETVGQAKQRHKLELRAWQSSQKALVKKWKSENMSKKEIESKLVEMENEIKVRHDTELDNI-SKQTASTDEPEI--KLAEV-------------------IVEKATSTAKLDKAQRKRDKKKQEE-KARQERIANESRDIVS-------KRQIECDQIADKLKALN-------MAIKEVPSDGHCMYHAIADQLKRMDFLPHMSMESHVYLRLRTAKYLRSHANDFLPFVELNYESDVSNEDQFEEYCKRVEESSDWGGQIEL 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11619.1277.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLU2_ECTSI7.630e-5282.73OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
K8YVN6_NANGC1.300e-2243.36Otu domain-containing protein 6b n=1 Tax=Nannochlo... [more]
A0A024UJP0_9STRA7.720e-1931.68OTU domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A835Z5X2_9STRA4.530e-1845.87OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
W4FCW5_9STRA5.890e-1846.23OTU domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A1Y1HXK5_KLENI4.240e-1733.08OTU (Ovarian tumor)-like cysteine protease n=1 Tax... [more]
A0A7S0NT02_9EUKA5.540e-1743.40Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
I0YST0_COCSC1.490e-1647.27Cysteine proteinase n=1 Tax=Coccomyxa subellipsoid... [more]
UPI0008FD536B3.840e-1631.29OTU domain-containing protein 6B n=1 Tax=Tarenaya ... [more]
A0A6G0X599_9STRA1.340e-1529.01OTU domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11619contigH-elongata_contig11619:192..5229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score185.7
Seed ortholog evalue2.9e-44
Seed eggNOG ortholog2880.D7FLU2
Preferred nameOTUD6B
KEGG koko:K14015,ko:K18342
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
GOsGO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006417,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008283,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016043,GO:0016579,GO:0016787,GO:0017148,GO:0019222,GO:0019538,GO:0019783,GO:0019941,GO:0022607,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032268,GO:0032269,GO:0032270,GO:0033554,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034976,GO:0035523,GO:0035871,GO:0036211,GO:0036459,GO:0036503,GO:0042221,GO:0043161,GO:0043170,GO:0043248,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0045727,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0070011,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0101005,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1990167,GO:1990168,GO:2000112,GO:2000113
EggNOG free text desc.protein K27-linked deubiquitination
EggNOG OGsCOG5539@1,KOG2606@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionOvarian tumour, otubain
Ec32 orthologEc-26_001250.1
Exons5
Model size795
Cds size795
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11619.1277.1prot_H-elongata_contig11619.1277.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11619 192..5229 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929675.2507067-CDS-H-elongata_contig11619:191..3181622929675.2507067-CDS-H-elongata_contig11619:191..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 192..318 -
1691679115.1637993-CDS-H-elongata_contig11619:191..3181691679115.1637993-CDS-H-elongata_contig11619:191..318Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 192..318 -
1622929675.2641838-CDS-H-elongata_contig11619:795..9281622929675.2641838-CDS-H-elongata_contig11619:795..928Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 796..928 -
1691679115.1783621-CDS-H-elongata_contig11619:795..9281691679115.1783621-CDS-H-elongata_contig11619:795..928Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 796..928 -
1622929675.2780864-CDS-H-elongata_contig11619:1558..16611622929675.2780864-CDS-H-elongata_contig11619:1558..1661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 1559..1661 -
1691679115.185559-CDS-H-elongata_contig11619:1558..16611691679115.185559-CDS-H-elongata_contig11619:1558..1661Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 1559..1661 -
1622929675.2900765-CDS-H-elongata_contig11619:1970..22491622929675.2900765-CDS-H-elongata_contig11619:1970..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 1971..2249 -
1691679115.1931996-CDS-H-elongata_contig11619:1970..22491691679115.1931996-CDS-H-elongata_contig11619:1970..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 1971..2249 -
1622929675.3069594-CDS-H-elongata_contig11619:5076..52291622929675.3069594-CDS-H-elongata_contig11619:5076..5229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 5077..5229 -
1691679115.201734-CDS-H-elongata_contig11619:5076..52291691679115.201734-CDS-H-elongata_contig11619:5076..5229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11619 5077..5229 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11619.1277.1

>prot_H-elongata_contig11619.1277.1 ID=prot_H-elongata_contig11619.1277.1|Name=mRNA_H-elongata_contig11619.1277.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp
MDVLRDDQAVDEVKARHKKELKAQEGSGRKLLKQANKSKTKKAEAESMIA
KMDAETKERHRRELEAAESKMLEKFPAPDVGDSAAEVGRGGAEGGSKENG
DDAESGVSAAAKGLGSVSLEDRERDERDQKRAKAQRKRDKQREKELERER
RIEREKKEGEADPRIAEMEALGAQVAPRGFRVSEIKADGHCLYRAVAEQL
SLTGRRPELTEESYLLMRQEAARELRSSPGEYLPFLEGIEEGEAFEQYCK
KVEASAEWGGQVELQ
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mRNA from alignment at H-elongata_contig11619:192..5229-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11619.1277.1 ID=mRNA_H-elongata_contig11619.1277.1|Name=mRNA_H-elongata_contig11619.1277.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5038bp|location=Sequence derived from alignment at H-elongata_contig11619:192..5229- (Himanthalia elongata Himel1 dioecious)
ATGGATGTCCTACGTGATGACCAGGCGGTGGACGAAGTGAAGGCTCGGCA
CAAGAAGGAGCTCAAGGCTCAAGAGGGCAGCGGGCGGAAGCTGTTGAAGC
AAGCGAACAAAAGCAAGACGAAGAAAGCGGAGGCCGAGTCGATGATAGCC
AAGGTATCCGCGAAACAATTATCTTGTACGAGTGCCTCGTTTTTTGTGTT
CCTGTGAAATCGCCAAGTCATGCACGTAGGCTCCCAGCAACCACAAATTT
GAACCTAATTTCTCTACATTTTCGGTGAAAGTGATGGGGTCCATTTCCGC
TGGATAATAACCAAATTTAGTACAGTACATGGTTTAGAACAAAAACGCCT
CGCTTCATTTTTCGGCATTGTTGAAAGGTTCTGCAGAACTTCGTGATCAA
GCTCGTAGTGAACGCGCGCGCGACCAATCAGGGCACAATTTTCCAGAACA
ACACTCCGTAACGGGAGGGGGGAGGCTACAGGACACACTGGCGCTAACGC
CTCCTTGCAAGTTCGAACCGGTTTTCGCGGAAAATGCAAATTAAAATAAA
GCATCGGTACTAGTATATATTTGCATTTTGCAAACCGTCATGCCCACTCT
ACCCATATTGGGTGTGAGAAAATAGAGACGTACAATATTCTCAACAGGCT
GCACCTGTTACTCAAGCTACCTTGAGGACTGCTGGCTCAGCGTCGGCGGA
CTTTCGGTAGTAAATGCCACCGGTACGCAATTGCGTGACCTGATGAAATC
GGGATTGGCCCGATCGCGGTTGACGTTAGAGATAGGCGCCGTCGCGGAAA
ACGAGAGGATCGAGAGGATCCCGAGAGTACGCACCCAGATTCACCCTTGA
GTTGAGAGAATGGGCAGACTGACGCGGGACGGGACAGCTGTAAGACCAAA
TTCTCAGGCGCGAACGGGGACAGGGGAGAATGATTTTCCCTGTCCAGCTA
ACCACGAGCAAAAGACAAACAAATCCGGTTGATCTTACTCTGTTATATGT
AAAGCGATGACCATACATCTAAGGCAGCCGTGATACATCGGTTTCCAACT
ATAGATAAATCGGCGAATCATGAAACTTTGAAGATATAGCTCTAGAGCCT
ATGGGGCAATGATGGGGCAATGTTTATAGATAACCTTACAATGTTGACAA
AGGGTGAGGGTTGAAGGGAGTTGCGGCTTATCAGGTGATATAGAGCTGTG
GCGGAGCGAAGCAGAGGACGTAGGGTGAGAGTATTCGATAGCAGGCTAGA
GCTATCGGCTTCTGGTGTTTAGGGACAGTATTAAGAGAAGTCTGAAAATC
AAAATTAATATTTTCCCCAAAAATCAAAATCAAAACAGGATTCTCCCGAA
AACTGGAAAAAAAACTGGTCAGGTCATGTTAAAGGGGGCAAAAGGGTTGG
TTGGGGTACTTTTTCAAAAGTTAGGGATAACGCGCAGGAATATACAAAAC
CTCTGTATTAGGGGAACATCGGGAACCACAGCAGTATCTTCGCACGCGAT
CATGCGTCCTCTTCGCAGCAGCAGGGCTAAGTGCCTTGAGTGTTTGGTAG
CGCAGTGACTGCGAGGCTGTCGCAGTTGCTGGATTTGTTGGTAGTGTTGA
ACACTCTAGAGAAGATACTACAGCTGCTATCGCCTCCCTCGTCTCAACCG
AAAGGACCGAGGAGCGGTTCGTTAGATGCAGCTGCGTCGACTGCAACCCG
ATAAGCAGATGTAGCAAGAAGCAGTGCCAGGCTAGCAGTTAGTGTCAGGA
CTGGAGAACTGATGTGTATCAGTTAGGAGCACTTCGGCTGCTCCGTTTCC
GATAACCAGCTGACCGATGTGTTGGTTCACCGGGGTCAGGGTGTGGCCGG
GTTCCTGTTCATTGTATAATGGCTTCCTCTCTGCAGCGCCGCGAGACGCG
AGAGGGATATACTCTCCGCCTTCCAAGTGCTGAACTCCTCGCCCCACCTA
TTTTGATTTTGACACAAAAAATTACTCCTTTGCTGCGACCCACATTTGCT
GAAAATCAAAAGACAGTCATGAGGTATTATTCATTCTTCGATCAATCAGA
GCTCGATTTTTATTTTTATTTTTTTGGAATTTTTATTTTTCGAACTCTGT
TAATAGCGGCTCTTGTGGGTGTTGGTTTCATGTCGTCTGCATGGATGGCG
GCATATTCTGCTGGCTGCGGGCGTGTTTGTGTTCCTTGTGCTGCCTCCTC
CTCCTCCTCCTATATATGTTTCTTGTCAAATTATAGCAAATAATATATAA
CAGACTGTATACACGCAAAGAGGTTGATTTCACAGGGAGGAGTCAAAAGG
TATAGTATCGAAGCAGATCATCTCGGATCGCACCGTATCGATTTGTATAT
TATCGTATCGATTTGTATATTATCGTATCGTAAAAACCAGCCAACATGCT
GCGAGTCGCACTTGGAAACATTCTCGAAAGAAACCACACAACTGTATGAC
CGCGGGTTTGTAGACAACGGTAGACGGCAGGAAGGGGTGGTCGCTCGCTC
GCGGTGTAACGCGTCTTCCAGTGTGAGCGTTCGGTTACACTTCCGATTGC
TGTGGTAGTAGTCACCTCTCCGAGGCGATGCCTCTTCATGAAAGTGAAGC
ACACTATCGCGCTATGTTTAATTCGTCCTTTGCTGCGCAGTAGTATACAC
CATGCTTTGCCGTCTGTCGCGTACTTAAAACTTGACTGTTCGCATGTTTT
TTACCCACGGTGTTTTCGTCGTCGTCGTCGTCGGTAGTCAGACAACACCC
AAGAGAAAATTATAGGGTGGAGATCTCCGCCCTCATGCCTTGCGACGCCC
TTACATATCATACAAACCCTACATTATGTACATTTCACACGGCATTTAAA
GATGTACTGTAGGCAGCCTAACGGTGTCTCACACGGTCGACCTCTACAGC
GGCACGCGCCTTCTAAGAATATTGATAAACACCCTCAAGATGGTGTACTG
TACATCGAACCGTGCTGTGCACTACTGTAGATGGACGCGGAGACAAAGGA
GCGACATCGCCGAGAGCTAGAGGCAGCCGAATCCAAAATGTTGGAGAAAT
TTCCGGCCCCGGACGTTGGGGATAGCGCCGCCGAGGTGGGGAGGGGAGGC
GCGGAGGGTGGTTCCAAGGAGAACGGTGATGATGCGGAGAGCGGAGTCAG
CGCGGCAGCGAAAGGCTTGGGCAGCGTTTCGCTGGAGGATCGGGAAAGGG
ACGAACGAGATCAGAAGAGGGCCAAGGCGCAGCGCAAGCGGGACAAGCAG
CGAGAGAAGGTACGTCCTCAGACATGTACAGTGCGTTTAAACTGTATAGG
ATATGCTACGTCTTAACGGCCACTGTGCCCTTACTATCCCGCGCTGAACG
ACAATCCACCCCAGGGTTCTGCTGTGTAATGGTAGCGCATGTGGTGTGTT
TCACGTACAACGCCGCGCGTTCAAGTGCACGCGGGTCTGAGGCAGGGGAG
GAAGGTGGAGAAACGGAGGGGGGATGGAGATCATCACACACGGCGCTCGC
GCTGACCGAATCCCACCCTCGACCCACGCACATCGCCGCCGTGATCCCGT
GGTAATGACGCCTCGCAGGAGCTGGAGCGAGAAAGGCGAATAGAGAGAGA
AAAAAAAGAAGGGGAAGCCGACCCCAGAATTGCAGAGATGGAAGCACTGG
GTGCTCAGGTCGCCCCAAGAGGTGTAGTTTGTGTCTGTCTGTGTGTGTGT
GTATGTATTTATTAAATTGTACATAGCCGCCCAATCCAGCCCTGTCATGC
TTCTAGTCATTCTATGCTACTCGTGTTGGTCCTCCCGATGAGGGATCTGA
TCAAATGTGACAAAAGGGGACATACTCTCTCTCTAGAGTTATTATTTAAC
TCTGTGTATCTCACCGTTTCCCTGCAGCTCTCAGTAGCCGTGCGTGCGAT
GTTCGTCTGCGCTTGGGGTTGGGTTTTCGAGGAATAGTCGACGGCGTCGA
CCTAGCAATGTTTTCTTTTCGTTTTTCTTTTTTTGTTCTCTCGTCGGTAC
TGTTGAAAATAGCCCTTGGTGACATAATCTTGTGTTCAACGCCGAAAGAG
GTCACCCTGGCAACTTTGCATATACACATACATGTCGAAATAGTTTGGGC
AGGAGCATCGGAACGAGGGGTAGACCGAACCTCCTTTGCGTCTTCTCGAG
AATAGGGACAGGAACAGGGGCCACCTACACAAGCCTCAGGGCAGCACCGA
TTTTCCGCTCGCACAATATTGTTGCCCGCCAACACTTGATGCCGACAAAG
GACGTGGGCGTTTGTCTCGCCTGCTTGGCGTGTTCGTGTGACTGGGGGCA
GGTTTTCGCGTAAGCGAAATCAAGGCGGATGGACACTGCCTCTACCGCGC
GGTAGCGGAGCAGCTGAGTCTTACAGGGCGGAGGCCGGAGTTAACGGAGG
AATCATACCTGCTCATGAGACAGGAGGCTGCGAGGTGCTAGCTCTTGCTT
TGCCGTTGCACTGTTTTGACCTCCTTTTTCGTCTCTTTGGAGGTTTGGCG
ATGCTTGAAACCAAGCCCCAAGGGTCGAGAGTGCATAGTTGTCGGTTGGC
AAAATTTTAACCCCTTGACAGACGCGTCAAGGACACGTCACGACACTAAA
ACTAGTATATTTTCCAAAAAGAGGCCTTGACACACTGTCAAGAACCCGTC
AACCGACACCTTTTGTCGAGAGGTTTGAAGCCCATCTTGAGGATCAATCC
TCGACAAGGATGATAGATCGGCTGTTCGGGGTCGAATTGGAATCGATGCT
TTCTTCTGTGGACGGACGTTCCGATCAATCTACACAACCACCTTAAGAAC
ATAAGATTCACTTCAATCGCTGCAGTATGAAACGTGAACCCAGCTCTGCG
ACAGTAGTTACACCGCCCCCGTCCCCCCTCATCGGACCGGCCTATTTTTC
AAACCCCATAGGGAGCTTCGGTCCTCCCCTGGAGAATACCTGCCCTTTCT
CGAAGGGATCGAAGAGGGAGAAGCTTTCGAGCAGTACTGTAAAAAGGTCG
AGGCTAGCGCCGAGTGGGGCGGCCAGGTGGAACTACAG
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Coding sequence (CDS) from alignment at H-elongata_contig11619:192..5229-

>mRNA_H-elongata_contig11619.1277.1 ID=mRNA_H-elongata_contig11619.1277.1|Name=mRNA_H-elongata_contig11619.1277.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at H-elongata_contig11619:192..5229- (Himanthalia elongata Himel1 dioecious)
ATGGATGTCCTACGTGATGACCAGGCGGTGGACGAAGTGAAGGCTCGGCA
CAAGAAGGAGCTCAAGGCTCAAGAGGGCAGCGGGCGGAAGCTGTTGAAGC
AAGCGAACAAAAGCAAGACGAAGAAAGCGGAGGCCGAGTCGATGATAGCC
AAGATGGATGTCCTACGTGATGACCAGGCGGTGGACGAAGTGAAGGCTCG
GCACAAGAAGGAGCTCAAGGCTCAAGAGGGCAGCGGGCGGAAGCTGTTGA
AGCAAGCGAACAAAAGCAAGACGAAGAAAGCGGAGGCCGAGTCGATGATA
GCCAAGATGGACGCGGAGACAAAGGAGCGACATCGCCGAGAGCTAGAGGC
AGCCGAATCCAAAATGTTGGAGAAATTTCCGGCCCCGGACGTTGGGGATA
GCGCCGCCGAGGTGGGGAGGGGAGGCGCGGAGGGTGGTTCCAAGGAGAAC
GGTGATGATGCGGAGAGCGGAGTCAGCGCGGCAGCGAAAGGCTTGGGCAG
CGTTTCGCTGGAGGATCGGGAAAGGGACGAACGAGATCAGAAGAGGGCCA
AGGCGCAGCGCAAGCGGGACAAGCAGCGAGAGAAGATGGACGCGGAGACA
AAGGAGCGACATCGCCGAGAGCTAGAGGCAGCCGAATCCAAAATGTTGGA
GAAATTTCCGGCCCCGGACGTTGGGGATAGCGCCGCCGAGGTGGGGAGGG
GAGGCGCGGAGGGTGGTTCCAAGGAGAACGGTGATGATGCGGAGAGCGGA
GTCAGCGCGGCAGCGAAAGGCTTGGGCAGCGTTTCGCTGGAGGATCGGGA
AAGGGACGAACGAGATCAGAAGAGGGCCAAGGCGCAGCGCAAGCGGGACA
AGCAGCGAGAGAAGGAGCTGGAGCGAGAAAGGCGAATAGAGAGAGAAAAA
AAAGAAGGGGAAGCCGACCCCAGAATTGCAGAGATGGAAGCACTGGGTGC
TCAGGTCGCCCCAAGAGGAGCTGGAGCGAGAAAGGCGAATAGAGAGAGAA
AAAAAAGAAGGGGAAGCCGACCCCAGAATTGCAGAGATGGAAGCACTGGG
TGCTCAGGTCGCCCCAAGAGGTTTTCGCGTAAGCGAAATCAAGGCGGATG
GACACTGCCTCTACCGCGCGGTAGCGGAGCAGCTGAGTCTTACAGGGCGG
AGGCCGGAGTTAACGGAGGAATCATACCTGCTCATGAGACAGGAGGCTGC
GAGGTTTTCGCGTAAGCGAAATCAAGGCGGATGGACACTGCCTCTACCGC
GCGGTAGCGGAGCAGCTGAGTCTTACAGGGCGGAGGCCGGAGTTAACGGA
GGAATCATACCTGCTCATGAGACAGGAGGCTGCGAGGGAGCTTCGGTCCT
CCCCTGGAGAATACCTGCCCTTTCTCGAAGGGATCGAAGAGGGAGAAGCT
TTCGAGCAGTACTGTAAAAAGGTCGAGGCTAGCGCCGAGTGGGGCGGCCA
GGTGGAACTACAGGGAGCTTCGGTCCTCCCCTGGAGAATACCTGCCCTTT
CTCGAAGGGATCGAAGAGGGAGAAGCTTTCGAGCAGTACTGTAAAAAGGT
CGAGGCTAGCGCCGAGTGGGGCGGCCAGGTGGAACTACAG
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