mRNA_H-elongata_contig53996.12762.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: D8LF35_ECTSI (SAP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF35_ECTSI) HSP 1 Score: 317 bits (811), Expect = 1.820e-102 Identity = 148/225 (65.78%), Postives = 181/225 (80.44%), Query Frame = 1
Query: 1 LPPSNEEVERRAVILDHLERREASFELSDDPVGAIVPREEVYTVFTKRAIRPWDGPHADRAETHVVVLLSDVFGWEDPFCRSAADQVADVCNAIVLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEAVAGVIKPDTVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKV 675
LP E++ +RA+I+D LERRE +FEL + A VPR + Y V TK+A+RPWDGPHADRAETHVVVLL+DVFG+ D F R+AAD++A+VC+AIV+VPD+FR+RPW +PEEEYE WR+ H+P V+ DIRACV +A+ EYK TSLGL+GFCYGGGRALEEA AGV+KPD VV FYPTRYD+ V S +TCP AAFFAEHDVL GAT+ DA LR++L NEKV
Sbjct: 273 LPEPTEDMRKRAIIMDLLERRETTFELEEGLQPADVPRSDAYVVSTKKALRPWDGPHADRAETHVVVLLTDVFGYGDSFTRNAADEIAEVCDAIVVVPDMFRRRPWTHEQPEEEYEDWRSSHDPVAVANDIRACVDFARKEYKATSLGLVGFCYGGGRALEEAAAGVVKPDNVVVFYPTRYDVSEVASRVTCPVAAFFAEHDVLPGATVEDACALREQLRDNEKV 497
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A8J5XPH0_DIALT (DLH domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPH0_DIALT) HSP 1 Score: 145 bits (366), Expect = 1.780e-38 Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 1
Query: 85 DDPVGAIVP---REEVYTVFTKRAIRPWDGPH-ADRAETHV-VVLLSDVFGWEDPFCRSAADQVADVCNAIVLVPDLFRKRPWDAGRPEE--EYEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEAVAGVIKPDTVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKV 675
DDP P E V T R R + H A AE++ +VLL+D+FGW P R+AAD++A C A VLVPDLFR + W +P EYEAWR V+ D+ C Y + + LGL GFC+GGGRALE + VVAFYPTRYD++ V ++ P A F D +AGAT DA L L +N ++
Sbjct: 70 DDPAYEPAPLHTEELVLAGSTGRPARAYLTAHKASMAESNKGIVLLTDIFGWAHPSARAAADRLAASCEAFVLVPDLFRGQAWPESKPPSGPEYEAWRTRIALSDVAGDVLGCARYLNSRHGVELLGLAGFCWGGGRALELVAREWVDAHAVVAFYPTRYDVEPVARAMHLPLLAVFGGADTVAGATPSDAAGLESGLARNPRM 273
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A0G4EPR0_VITBC (DLH domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EPR0_VITBC) HSP 1 Score: 145 bits (366), Expect = 1.390e-36 Identity = 76/182 (41.76%), Postives = 102/182 (56.04%), Query Frame = 1
Query: 178 RAETHVVVLLSDVFGWEDPFCRSAADQVADVCNAIVLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEAV----------AGVIKPDT------VVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKV 675
R V++L+DVFG+ D F R AD++AD + V VPDLF +PW A RP EYEAWR+ H+P+ V I A + + K YK + ++GFCYGGGRALE V A V + VVAFYPTRYD++ +G + P +A +D L GA DA+RL + NE +
Sbjct: 233 RDPRRAVLMLTDVFGYRDRFMRRVADRLADTLSLPVFVPDLFLGQPWSADRPPAEYEAWRSQHDPDRVDDTIGASLRFLKESYKMDVIAVVGFCYGGGRALETGVRYGGMEEAEGAAVCRNRVDKSVRCVVAFYPTRYDVEAIGRQMRVPTCCVYAANDTLPGARKADAERLYEAFRANEDL 414
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: R7QF11_CHOCR (Carboxymethylenebutenolidase homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF11_CHOCR) HSP 1 Score: 116 bits (291), Expect = 2.150e-28 Identity = 67/172 (38.95%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 166 PHADRAETHVVVLLSDVFGWEDPFCRSAADQVADVCNAIVLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEAVAGV--IKPDTVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKV 675
PH R VVL++D+ G+E+ R+ A +A +VPDLFR PW GR + EYE+WR H+P V DI TSLGL+GFC+GGGR +EE + PD VAFYPTR+D + VG + CP + D L ++ LR+ L N V
Sbjct: 30 PH--RPSRTAVVLMTDILGYENHETRAVAMLLA-AHGFTTIVPDLFRGNPWVQGRDKSEYESWRRTHDPATVRGDILLARQALTERSLGTSLGLVGFCFGGGRLMEEVALNTSGLNPDAAVAFYPTRFDPEDVGRNAHCPLLVQTGDRDDLV--PVYVVNTLRETLQANASV 196
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A0G4HN02_9ALVE (DLH domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HN02_9ALVE) HSP 1 Score: 110 bits (274), Expect = 5.060e-24 Identity = 62/188 (32.98%), Postives = 95/188 (50.53%), Query Frame = 1
Query: 196 VVLLSDVFGWEDPFCRSAADQVADVCNAIVLVPDLFRKRPW--------------DAGRPEEE--------------YEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEAVAGVIKPDTVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKV 675
+VLL DV+G++D R AD+++ +CN +V++PDLF PW D R + + YE WR + V A IR+ ++ + E LGL+GF +GGGRALE ++ ++ P VVAFYPTRY++ + P + FA +D + GA D + L L + +V
Sbjct: 503 LVLLPDVYGYKDKNIRKIADRLSQICNTVVVIPDLFDGNPWKDSMARVVIEKMESDLKRQKGQTPTKADKMEIKRRVYEVWREQIDQSRVHAVIRSTASFLRRELPLDHLGLVGFSFGGGRALEASLCPLVAPSAVVAFYPTRYNMTHICEWAKAPTSLVFAGNDTIQGARPVDLEGLNYGLRQQNRV 690
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A448YVK0_9STRA (SAP domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVK0_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.830e-23 Identity = 77/208 (37.02%), Postives = 110/208 (52.88%), Query Frame = 1
Query: 163 GPHADRAETHVVVLLSDVFGWEDPFCRSAADQVADVCNAIV-LVPDLFRKRPW--DAGRPE-----EEYEAWRALHNPEVVSADIRACVAYAKAEYKPTSLGLMGFCYGGGRALEEA-----------VAGVI-----KPDTVVAFYPTRYDIDLV-GSSIT-----C--PAAAF-----FAEHDVLAGATLHDAQRLRDKLLKNEKV 675
G E V++LSDV+G ++ A+++A C +V +VPDLFR RPW D P ++YE WRA H+ +S DIRA A + +Y +SL + G C+GGGRALE A V G I +P+ VVA+YPTRY+ +L+ G T C P F FA D L GAT DA++L+ L +++++
Sbjct: 585 GAQLSAEEVQGVLILSDVYGPFTEATKNLAEKIAFECQPVVCMVPDLFRGRPWREDLTTPGFNQEGQDYETWRATHDDLRISVDIRASAAILREQYGVSSLVVWGTCFGGGRALEIAAGYLPRGQIHDVDGTIGPVPVRPEVVVAWYPTRYNANLLFGKDRTEQLRICEEPGRNFAVMGVFAGKDTLEGATPGDAEKLKSLLGEDDRI 792
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A2Z6LSK9_TRISU (DLH domain-containing protein n=4 Tax=Trifolium TaxID=3898 RepID=A0A2Z6LSK9_TRISU) HSP 1 Score: 104 bits (260), Expect = 5.230e-23 Identity = 62/175 (35.43%), Postives = 95/175 (54.29%), Query Frame = 1
Query: 196 VVLLSDVFGWEDPFCRSAADQVADVCNAI-VLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTS----LGLMGFCYGGGRALEEAVAGVIKPD------TVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKVLYTP 687
++LLSD++G+ED F R A +VA CN +LVPDLFR+ PW +P +E W A HNPE ++ DI A + E+ LG++GFC+GGGR LE V+ D T ++FY T+ D L+ S + P ++D T+ + + ++ K+ + KV+ P
Sbjct: 142 LLLLSDIYGFEDSFTRDFAYRVA--CNGFNILVPDLFRRNPWTKDQPNTLFEQWIARHNPERIAKDITAWTEWLADEFMTAGITKKLGIIGFCFGGGRVLE-----VLARDQGACFGTGISFYGTKID-PLIASDVKVPVLFILGDNDPFC--TVGEMKNIQMKIDRGSKVVIFP 306
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A834WJ43_9FABA (Carboxymethylenebutenolidase-like protein n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WJ43_9FABA) HSP 1 Score: 100 bits (250), Expect = 5.300e-22 Identity = 63/172 (36.63%), Postives = 89/172 (51.74%), Query Frame = 1
Query: 196 VVLLSDVFGWEDPFCRSAADQVADVCNAI-VLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTS----LGLMGFCYGGGRALEEAVAGVIKPD------TVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATLHDAQRLRDKLLKNEKVL 678
++LLSD+FG++D F R A +VA CN +LVPDLFR PW +P+ +E W A NPE ++ DI + E+ LG++GFC+GGGR LE V+ D T V+FY TR + S I P ++D L + D Q + K+ K KV+
Sbjct: 81 ILLLSDIFGFQDSFTRDFAYRVA--CNGYNILVPDLFRGNPWSKDQPKAMFEQWIARQNPERIAEDISRWTKWMVDEFMAAGISKKLGIIGFCFGGGRVLE-----VLAQDKGACFGTGVSFYGTRMQ-SVAASDIQVPVLFILGDNDPLCAVS--DVQNIEKKIDKGSKVV 242
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A9NP06_PICSI (DLH domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NP06_PICSI) HSP 1 Score: 99.8 bits (247), Expect = 2.860e-21 Identity = 63/184 (34.24%), Postives = 91/184 (49.46%), Query Frame = 1
Query: 94 VGAIVPREEVYTVFTKRAIRPWDGPHADRAETHVVVLLSDVFGWEDPFCRSAADQVADVCNAI-VLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEYKPTS----LGLMGFCYGGGRALEEAVAGVIKP-DTVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATL 627
V ++ E+ + + +A++ +G V+LLSDVFG+ED R A +++ CN VLVPDL+R PW RP+ E+E WR H PE V++DI + E+ LG++GFC+GGGR +E V FY TR+D L S + P E+D L L
Sbjct: 91 VELVLGEEDSFNAYLLKAVKNNNGA--------AVLLLSDVFGFEDSGTRDFAYRLS--CNGYNVLVPDLYRGEPWSKDRPQSEFEKWRRKHLPERVASDIDISAKWLLEEFSAAGISDKLGIVGFCFGGGRLVETLARDAQSHFGAAVCFYGTRFDPSLA-SQLKIPVLFIVGENDPLCPVDL 263
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Match: A0A4Y7JNJ4_PAPSO (DLH domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JNJ4_PAPSO) HSP 1 Score: 97.4 bits (241), Expect = 5.500e-21 Identity = 66/161 (40.99%), Postives = 83/161 (51.55%), Query Frame = 1
Query: 196 VVLLSDVFGWEDPFCRSAADQVADVCNAI-VLVPDLFRKRPWDAGRPEEEYEAWRALHNPEVVSADIRACVAYAKAEY----KPTSLGLMGFCYGGGRALEEAVAGVIKPD------TVVAFYPTRYDIDLVGSSITCPAAAFFAEHDVLAGATL-HDAQR 642
V+LLSDVFG+ED R A +VA CN VLVPDLFR PW RP+++YE WRA + E VSADI + E+ LG++GFC+GGGR LE + D T FY TR + V SI P + D L L HD ++
Sbjct: 43 VLLLSDVFGFEDSATRDFAYRVA--CNGYNVLVPDLFRGNPWSKHRPKDDYENWRAKQSLERVSADINLAAKWMVDEFIAAKMSKKLGIIGFCFGGGRILE-----TLSQDQGSYFGTGACFYGTRINPS-VADSINVPVLFISGDKDPLCPVELLHDLEK 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53996.12762.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53996.12762.1 >prot_H-elongata_contig53996.12762.1 ID=prot_H-elongata_contig53996.12762.1|Name=mRNA_H-elongata_contig53996.12762.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=230bp LPPSNEEVERRAVILDHLERREASFELSDDPVGAIVPREEVYTVFTKRAIback to top mRNA from alignment at H-elongata_contig53996:258..2561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53996.12762.1 ID=mRNA_H-elongata_contig53996.12762.1|Name=mRNA_H-elongata_contig53996.12762.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2304bp|location=Sequence derived from alignment at H-elongata_contig53996:258..2561- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53996:258..2561- >mRNA_H-elongata_contig53996.12762.1 ID=mRNA_H-elongata_contig53996.12762.1|Name=mRNA_H-elongata_contig53996.12762.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1380bp|location=Sequence derived from alignment at H-elongata_contig53996:258..2561- (Himanthalia elongata Himel1 dioecious)back to top |