prot_H-elongata_contig53937.12757.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53937.12757.1
Unique Nameprot_H-elongata_contig53937.12757.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length166
Homology
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: D8LPN6_ECTSI (GDT1 family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN6_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 8.960e-78
Identity = 137/165 (83.03%), Postives = 149/165 (90.30%), Query Frame = 0
Query:    2 ALLAAAAATTSQILPHAAVAA-ENTLPLVSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEGKKTTW 165
            ALLA A A + Q+LPHAAVAA E  +P+ SAAV   LVE+LTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVL+GLAFHSVPSVFTSGLPLDD+IAAAAFLYFG+ TLKDAY LP DSN+GI EE+AEAEES+KE+EGKKT W
Sbjct:   95 ALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVW 259          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A6H5L6M0_9PHAE (GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6M0_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 1.250e-76
Identity = 137/165 (83.03%), Postives = 149/165 (90.30%), Query Frame = 0
Query:    2 ALLAAAAATTSQILPHAAVAA-ENTLPLVSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEGKKTTW 165
            ALLA A A + Q+LPHAAVAA E  +P+ SAAV   LVE+LTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVL+GLAFHSVPSVFTSGLPLDD+IAAAAFLYFG+ TLKDAY LP DSN+GI EE+AEAEES+KE+EGKKT W
Sbjct:   94 ALLALAGAVSCQLLPHAAVAATETAVPIASAAVDGTLVERLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLLGLAFHSVPSVFTSGLPLDDIIAAAAFLYFGINTLKDAYALPDDSNQGIEEERAEAEESVKELEGKKTVW 258          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A836CPU7_9STRA (GDT1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPU7_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.720e-43
Identity = 90/146 (61.64%), Postives = 109/146 (74.66%), Query Frame = 0
Query:    4 LAAAAATTSQILPHAAVAAENTLPLVSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKA 149
            L AA A  S  LP AA AA      ++ A+    + + TS+GF QAFSLVFVSEIGDKTFFIA LLAAKTSRLISFAGS+ AL+VMTVL+ L+G+AFHSVPS  T+G+P DD IA AAFLYFG++TL+DA ++P D N G+  E A
Sbjct:  100 LVAAVALLSHALPAAAAAAVTAGAPLTGAIADGTLTEATSNGFVQAFSLVFVSEIGDKTFFIAGLLAAKTSRLISFAGSIAALSVMTVLSCLIGVAFHSVPSTLTNGIPFDDYIAVAAFLYFGLVTLRDASQIPDDDNSGMEAEAA 245          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A7S2U7L4_9STRA (GDT1 family protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7L4_9STRA)

HSP 1 Score: 138 bits (348), Expect = 1.760e-36
Identity = 75/130 (57.69%), Postives = 101/130 (77.69%), Query Frame = 0
Query:   38 VEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEGKK--TTW 165
            ++ L+ +GF+QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+GALAVMT+++VL+G  FH+VPS  + GLPLDD+ A AAF +FG+ TLK+A ++  +    ++EE A+AEE+++  +  K  T W
Sbjct:  156 LDSLSQTGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFIGSIGALAVMTIISVLIGQIFHAVPSGLSQGLPLDDIAAVAAFAFFGIKTLKEAIEMDEEGVSAMDEEFADAEEAVEGSDSIKQITAW 285          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: W7TMF8_9STRA (GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMF8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.770e-36
Identity = 74/131 (56.49%), Postives = 98/131 (74.81%), Query Frame = 0
Query:   37 LVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEG--KKTTW 165
            +V KL +SGF QAFSLVFVSEIGDKTFFIA LLA KTSRLISF GS+ AL+VMT+++VL+G AFH++P     G   D  +A AAF YFG+ TLKD+Y +    + G++EE+AEAE++++E     ++T W
Sbjct:  164 VVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLISFTGSMAALSVMTIISVLIGQAFHAIPQGLGGGFKFDQWVAVAAFSYFGLKTLKDSYDMADGDSSGVDEERAEAEKAVQESSAPERRTPW 294          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A7S2HML6_9STRA (GDT1 family protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HML6_9STRA)

HSP 1 Score: 134 bits (338), Expect = 4.060e-35
Identity = 79/140 (56.43%), Postives = 102/140 (72.86%), Query Frame = 0
Query:   31 AAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEG---INEEKAEAEESIKEIEG--KKTTW 165
            AA  S  +EK+  +GF+QAFSLVFVSEIGDKTFFIA LLA KTSR +S  GSVGALAVMT+++VL+G  FH+VPS    G+PLDDV A  AF +FG  TLK+++    D  EG   ++EE AEAEE+++E +   ++T W
Sbjct:  137 AASASSFMEKVAETGFYQAFSLVFVSEIGDKTFFIAGLLAMKTSRFVSLVGSVGALAVMTIISVLIGQIFHAVPSGIAQGIPLDDVAAVLAFAFFGFKTLKESF----DMEEGESVMDEELAEAEETVEESDTIRQRTAW 272          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A7S1CXU9_CYCTE (GDT1 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXU9_CYCTE)

HSP 1 Score: 133 bits (334), Expect = 9.190e-35
Identity = 72/125 (57.60%), Postives = 98/125 (78.40%), Query Frame = 0
Query:   31 AAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESI 155
            A+  + L + LT +GF+QAFSLVF+SEIGDKTFFIA LLA KTSR++S+ GS+GALAVMT+L+VL+G  FH+VP+    G+PLDDV A  AF +FG+ TLK+A ++  D +  ++EE AEAEE++
Sbjct:  110 ASTAASLFDSLTETGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRVVSYLGSMGALAVMTILSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFAFFGLKTLKEAIEMDSDGST-MDEEFAEAEETV 233          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A8J6C509_DIALT (GDT1 family protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C509_DIALT)

HSP 1 Score: 132 bits (333), Expect = 1.190e-34
Identity = 71/140 (50.71%), Postives = 98/140 (70.00%), Query Frame = 0
Query:   26 LPLVSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEGKKTTW 165
            L    A++  P+   L  S FFQA SL+FVS++GDKTFFIA +LAAKTSRL++F G+ GALAVMTV++V +G  FH+VP+ FT G+P+DD+IA A+F YFG+ +L DA  +    + G+  E+ EAEE +  I  K+  W
Sbjct:   93 LASAGASLVEPVTRSLLDSPFFQALSLIFVSDLGDKTFFIATILAAKTSRLLTFVGAAGALAVMTVISVAIGQVFHAVPTGFTRGIPIDDIIAIASFSYFGLKSLADAAAIEDGDDSGMAAEQREAEEELAAIGDKRGRW 232          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A7S1FYG6_9STRA (GDT1 family protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FYG6_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.700e-34
Identity = 76/139 (54.68%), Postives = 100/139 (71.94%), Query Frame = 0
Query:   29 VSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESIKEIEGKK--TTW 165
            ++ A  +  +E   S+GF+QAFSLVF+SEIGDKTFFIA LLA KTS+ +SF GS+GALAVMTV++ ++G  FH+VPS  T GLPLDDV A  AF +FG  TLKD+Y L  D    ++EE A+AE++++  E  K  T W
Sbjct:  139 IAGAPAASFIESFASTGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSKFVSFVGSLGALAVMTVISCILGQIFHAVPSGITQGLPLDDVAAVVAFAFFGFKTLKDSYDLE-DGESVMDEELADAEDAVEGSETIKQVTPW 276          
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Match: A0A7S2K988_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K988_9STRA)

HSP 1 Score: 132 bits (331), Expect = 9.680e-34
Identity = 73/130 (56.15%), Postives = 97/130 (74.62%), Query Frame = 0
Query:   26 LPLVSAAVGSPLVEKLTSSGFFQAFSLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAFHSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAEAEESI 155
            L  +S A  S +V + + SGF+QAFSLVF+SEIGDKTFFIA LLA KTSRL+SF GS+GALA MTVL+VL+G  FH+VP+    G+PLDDV A  AF +FG+ TLK+A  +  ++   ++EE  EA+E++
Sbjct:  176 LDSMSVADASAMVGRFSESGFYQAFSLVFLSEIGDKTFFIAGLLAMKTSRLVSFIGSMGALAAMTVLSVLIGQIFHAVPAGIAQGIPLDDVAAVLAFTFFGLKTLKEASDMDPEAGSVMDEEFEEAQEAV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53937.12757.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPN6_ECTSI8.960e-7883.03GDT1 family protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5L6M0_9PHAE1.250e-7683.03GDT1 family protein n=1 Tax=Ectocarpus sp. CCAP 13... [more]
A0A836CPU7_9STRA2.720e-4361.64GDT1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2U7L4_9STRA1.760e-3657.69GDT1 family protein n=2 Tax=Attheya septentrionali... [more]
W7TMF8_9STRA5.770e-3656.49GDT1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2HML6_9STRA4.060e-3556.43GDT1 family protein n=1 Tax=Helicotheca tamesis Ta... [more]
A0A7S1CXU9_CYCTE9.190e-3557.60GDT1 family protein n=1 Tax=Cyclophora tenuis TaxI... [more]
A0A8J6C509_DIALT1.190e-3450.71GDT1 family protein n=1 Tax=Diacronema lutheri Tax... [more]
A0A7S1FYG6_9STRA1.700e-3454.68GDT1 family protein n=1 Tax=Corethron hystrix TaxI... [more]
A0A7S2K988_9STRA9.680e-3456.15Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..164
NoneNo IPR availablePANTHERPTHR12608:SF6PROTEIN PAM71, CHLOROPLASTICcoord: 26..162
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..44
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 101..105
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..165
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 79..101
IPR001727Gdt1 familyPFAMPF01169UPF0016coord: 48..126
e-value: 3.7E-18
score: 65.6
IPR001727Gdt1 familyPANTHERPTHR12608TRANSMEMBRANE PROTEIN HTP-1 RELATEDcoord: 26..162
IPR001727Gdt1 familyPROSITEPS01214UPF0016coord: 57..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53937contigH-elongata_contig53937:403..900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53937.12757.1mRNA_H-elongata_contig53937.12757.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53937 403..900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53937.12757.1 ID=prot_H-elongata_contig53937.12757.1|Name=mRNA_H-elongata_contig53937.12757.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=166bp
AALLAAAAATTSQILPHAAVAAENTLPLVSAAVGSPLVEKLTSSGFFQAF
SLVFVSEIGDKTFFIAALLAAKTSRLISFAGSVGALAVMTVLAVLVGLAF
HSVPSVFTSGLPLDDVIAAAAFLYFGVITLKDAYKLPGDSNEGINEEKAE
AEESIKEIEGKKTTW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001727Gdt1