mRNA_H-elongata_contig53864.12746.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A6H5K8Z9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z9_9PHAE) HSP 1 Score: 308 bits (789), Expect = 1.010e-102 Identity = 146/193 (75.65%), Postives = 164/193 (84.97%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPSFGNVDPSVIYGDADPKSPPFEISSSSMHQHVE---GSSDRPVWWGKPLAEARGFADWKR 570
TPTCVSSQDDRPYPFMEPW+Y+GP+ER+M RLR+YLE NGAKV+A+SPRYLRVEFE A+PASVDDAEFYFTPGDAL+QFRC+RR G TDFGA+RRRMD IR AL FESI VLRNRKRA FGESP+DSFGPSFG DPSVIYGDADP SPPFE S ++ + G +DRP WWGKPLAEA GFADW++
Sbjct: 137 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIATSPRYLRVEFESPNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMADPSVIYGDADPMSPPFETPSDALRERYGEGGGGADRPAWWGKPLAEAGGFADWRQ 329
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: D8LJJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ3_ECTSI) HSP 1 Score: 237 bits (604), Expect = 5.850e-75 Identity = 113/138 (81.88%), Postives = 124/138 (89.86%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPSFGNV 414
TPTCVSSQDDRPYPFMEPW+Y+GP+ER+M RLR+YLE NGAKV+ASSPRYLRVEFE A+PASVDDAEFYFTPGDAL+QFRC+RR G TDFGA+RRRMD IR AL FESI VLRNRKRA FGESP+DSFGPSFG V
Sbjct: 137 TPTCVSSQDDRPYPFMEPWSYDGPFERSMSRLRNYLEFNGAKVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSFGMV 274
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A835YWY1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWY1_9STRA) HSP 1 Score: 163 bits (412), Expect = 5.750e-47 Identity = 94/182 (51.65%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 4 PTCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYL-ELNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPS-FGNVDPSVI----YGDADPKSPPFEISSSSMHQHVEGSSDRPVWWGK 531
PTCVS+QDD+PY FMEPW YE +A + +YL L GAK+VA S RYLR E G + +VDD E Y TP D +QFR +RR G TD G +R+RM+ +RIAL FE I VLRNR RAFIFGES +DSFGPS F N P + D DPK+P FE S S+ + + G WW +
Sbjct: 56 PTCVSTQDDKPYCFMEPWAYEVTTSQAKTLIANYLYTLPGAKIVAESERYLRAEVASLGGI--AVDDVELYLTPNDYTVQFRANRRDGVTDLGQNRKRMERMRIALGFEKIPVLRNRTRAFIFGESFLDSFGPSGFNNEVPEEMAPGAMWDRDPKAPVFETPSPSLKKALGG------WWAE 229
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A6V1P1K7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P1K7_HETAK) HSP 1 Score: 160 bits (405), Expect = 2.580e-45 Identity = 88/169 (52.07%), Postives = 113/169 (66.86%), Query Frame = 1
Query: 1 TPTCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLE-LNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPSF------GNVDPSVIY-GDADPKSPPFEISSSSM 483
TPTCVSSQDDRPY F+EPW Y+ RAM RL LE + G K++ + YLRVEF SVDDAE+YFTP D+++QFR +RR TDF A+RRRM+++RIAL +E I VLRNR+RA +F ES +DSFGP+ +D +Y GD DP++P +E S M
Sbjct: 104 TPTCVSSQDDRPYNFLEPWQYDTTQARAMRRLSDKLESIEGVKIIKKTEDYLRVEFH--DMRTGSVDDAEWYFTPNDSIIQFRAARRDAKTDFAANRRRMENLRIALGYEKIPVLRNRQRALVFFESLLDSFGPATIRDMTPEEMDAMELYRGDLDPRAPAWEAPSKQM 270
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: W7TBJ3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBJ3_9STRA) HSP 1 Score: 149 bits (376), Expect = 9.500e-41 Identity = 84/172 (48.84%), Postives = 110/172 (63.95%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWTYE-GPWERAMGRLRSYLE-LNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPSFGNVDP-----SVIYGDADPKSPPFEISSSSMHQHVEG 501
+C SSQDDRP F EPW YE E+AM RLRSY+E L GA+ +++ RYLR E + G ++DD EFYFTP D+++QFR +RR D GA+++RM+ IRIAL FE I VLRNR+RA F ESP+D +GPS+ P YGD+DP +P +E + EG
Sbjct: 138 SCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDG----NIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEG 305
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: R1BF77_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BF77_EMIHU) HSP 1 Score: 142 bits (359), Expect = 5.380e-39 Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 1
Query: 10 CVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELN-GAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPS--------FGNVD-------PSVIYGDADPKSPPFEISSSSMHQHVEG 501
CVSSQDDRP + PW E AM RLR +EL KVV RYLR EF G L +VDDAEF+FTP D L+QFR +RR DFGA+R+R++ RIAL +E + VLRNR+RA + ESP DSFGP+ F N D +YGD DP + P+ + SM +G
Sbjct: 43 CVSSQDDRPAVWDNPWVAEQALPSAMERLRRVIELKLQGKVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTPSMRDAKDG 222
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A7S2MSC2_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MSC2_9EUKA) HSP 1 Score: 139 bits (349), Expect = 2.330e-37 Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 10 CVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELNGAKVVASS-PRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPS-FGNVDPSVIYGDADPKSPPFEISSSSMHQHVEGSSDR 513
CVSSQDDRP + PW EG LR + G +VVA RYLR EFE SG + ++DD +F+FTP D L+QF+ RR G +DFG +R+R++ +RIAL +E + VLRNR+RA + ESP+DSFGP+ +G+ I+ D DP + F+ + + + S DR
Sbjct: 82 CVSSQDDRPTVWDNPWVSEGSLSDGYTALRRVINKLGGRVVAEDGERYLRAEFEDSGFIGVAIDDCQFFFTPNDTLVQFKAVRRGGASDFGVNRKRLEKLRIALGWEKVPVLRNRRRALVVVESPLDSFGPALYGD-----IFEDKDPMAGAFKPPTGAERLWMRESDDR 246
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A7S2ZDZ8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZDZ8_9RHOD) HSP 1 Score: 135 bits (341), Expect = 3.860e-36 Identity = 73/133 (54.89%), Postives = 90/133 (67.67%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELN-GAKVVASSPRYLRVEF-EVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGP 399
+CVSSQDD P F EPW Y+G A RL LE ++++AS Y+RVEF + G +VDDAEFYFTPGD +QFR +RR G TDFGA++ RM+SIR L F + VLRNR+R F+F ESP DSFGP
Sbjct: 83 SCVSSQDDAPRHFQEPWEYDGTSSSAQIRLEGLLESEYTSRIIASRSGYIRVEFFDAFG----NVDDAEFYFTPGDNTIQFRSNRRGGGTDFGANKLRMESIRKKLRFAKVPVLRNRRRVFVFFESPFDSFGP 211
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A7S0EPF0_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPF0_9EUKA) HSP 1 Score: 134 bits (336), Expect = 1.710e-35 Identity = 81/190 (42.63%), Postives = 106/190 (55.79%), Query Frame = 1
Query: 7 TCVSSQDDRPYPFMEPWTYEGPWERAMGRL-RSYLELNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPS--------FGN-------VDPSVIYGDADPKSPPFEISSSSMHQHV-----EGSSDR 513
+CVSSQDDRP F PW E + + M L ++ L+L G+ V+ RYLR EF G L SVDD E+YFTP D L+QFR RR DFGA+++R++ +RI L +E + +LRNR+RA + ESP DSFGP F N + IY D DP + F S SM + + GS DR
Sbjct: 51 SCVSSQDDRPSVFDNPWIAEQEYPKGMVTLEKAVLKLQGS-VIEKDGRYLRAEFASKGPLGESVDDVEWYFTPNDVLVQFRAERRGAGPDFGANKKRLEKMRIGLGWERVEILRNRRRALVVVESPFDSFGPGTYEADELGFSNREMVPAEANQKEIYRDVDPMAAAFRKPSGSMLEGMGEALRRGSDDR 239
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Match: A0A4D9CVY8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVY8_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.170e-30 Identity = 67/145 (46.21%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 85 MGRLRSYLE-LNGAKVVASSPRYLRVEFEVSGALPASVDDAEFYFTPGDALLQFRCSRRAGFTDFGASRRRMDSIRIALNFESIAVLRNRKRAFIFGESPVDSFGPSFGNVDP-----SVIYGDADPKSPPFEISSSSMHQHVEG 501
M RL+SY+E L GA+ +++ RYLR E + G ++DD EFYFTP D+++QFR +RR D GA+++RM+ IRIAL FE I VLRNR+RA F ESP+D +GPS+ P YGD+DP +P +E + EG
Sbjct: 1 MRRLKSYVESLPGAETISAEDRYLRFEIKEDG----NIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEG 141 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53864.12746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53864.12746.1 >prot_H-elongata_contig53864.12746.1 ID=prot_H-elongata_contig53864.12746.1|Name=mRNA_H-elongata_contig53864.12746.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=197bp TPTCVSSQDDRPYPFMEPWTYEGPWERAMGRLRSYLELNGAKVVASSPRYback to top mRNA from alignment at H-elongata_contig53864:51..1537+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53864.12746.1 ID=mRNA_H-elongata_contig53864.12746.1|Name=mRNA_H-elongata_contig53864.12746.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1487bp|location=Sequence derived from alignment at H-elongata_contig53864:51..1537+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53864:51..1537+ >mRNA_H-elongata_contig53864.12746.1 ID=mRNA_H-elongata_contig53864.12746.1|Name=mRNA_H-elongata_contig53864.12746.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1182bp|location=Sequence derived from alignment at H-elongata_contig53864:51..1537+ (Himanthalia elongata Himel1 dioecious)back to top |