mRNA_H-elongata_contig11614.1274.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig11614.1274.1
Unique NamemRNA_H-elongata_contig11614.1274.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: D8LH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH72_ECTSI)

HSP 1 Score: 549 bits (1415), Expect = 4.370e-194
Identity = 270/347 (77.81%), Postives = 309/347 (89.05%), Query Frame = 1
Query:  118 TASFERVMDGLSDNEKYNAVLQGVSSLVMSKKDRGAAAEGVFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGLVP--DDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATDPQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIERRT 1152
            TAS ERVM+GL +NEKYNAVLQGVSS+VM KK  G AA G FEEVFQLLDEM+ N+IKCS RT SAVVDAATATT+I II K  +KIRR G+G+K+SRD+GRLSLLPT   +KE+AL+GLVP  DDDR QEIG+A SF++LVGSDFSWEG+GQVMHYDTT+PT+IGA+TAAAV +DVWKRSGCTSK++L+G+NRLFLKD+ERESR EAGAFL AY+TGLPCF FQPSAVEALRMA DP +++ FLNGNG+HRILVWLLAGVA EG+VHRQMIASDPRQA AFLQMVR+RE G +L+PEDDSERVQWAFNEAR LLK+N+ A +ALRRRLE GGATVGDCVSIIERRT
Sbjct:   29 TASLERVMEGLGENEKYNAVLQGVSSIVMGKKKVGDAARGAFEEVFQLLDEMHANRIKCSIRTASAVVDAATATTDIGIITKVFSKIRRAGVGQKFSRDLGRLSLLPTEASKKEKALRGLVPVPDDDRAQEIGYAASFMVLVGSDFSWEGIGQVMHYDTTIPTVIGAVTAAAVGIDVWKRSGCTSKMVLNGMNRLFLKDVERESRAEAGAFLTAYMTGLPCFAFQPSAVEALRMAADPDMKETFLNGNGVHRILVWLLAGVAGEGLVHRQMIASDPRQAFAFLQMVRNREDGFELDPEDDSERVQWAFNEARALLKDNEGAFEALRRRLEGGGATVGDCVSIIERRT 375          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A835Z355_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z355_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.360e-103
Identity = 172/353 (48.73%), Postives = 244/353 (69.12%), Query Frame = 1
Query:  124 SFERVMDGLSDNEKYNAVLQGVSSLVMSK--KDRGAAAEGVFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGLVP--DDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATD-PQLEDIFLNGN--GIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSR----ECG-CDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIER 1146
            SF+RV+D LSD ++YNAVLQG++ + +S   KDR       F E+ +LLDEM    I C+ R+  AVVDAA +T  ++ +A A++K+RR G  +K+SR++ RL+ LP +  ++ RALK LVP   DDR  ++  A +F+ +VG DF+ +G+  V+ +D TVP ++   TA AVA+D+++     S+ +L+GL+RLF +D+ RESR EAGAFLA Y+TGLPCF F+P+ +EALRM    P+L++ F +G   G HR LVWLL+ VA E + HRQ+I SDPRQA  FL + R R     CG    + EDD   V+WAFNEAR LL++N+   +ALR+RLE+GGATVG+CVS+I+R
Sbjct:   23 SFDRVLDSLSDQDRYNAVLQGLAGIAVSSSGKDR-------FVELLKLLDEMADRNIGCTTRSGGAVVDAAASTAEVAKVATAMSKLRRTGAAQKFSRELTRLAPLPLDERRRARALKDLVPTPSDDRGGDLMHAGAFLGVVGFDFAGDGLAPVLDFDATVPAILSLATAGAVALDIFQGGAERSRRVLAGLSRLFTRDVSRESRAEAGAFLAGYLTGLPCFAFKPNVLEALRMVEGMPELKEAFQSGGAGGAHRTLVWLLSAVAGEHLTHRQLIVSDPRQATTFLLLARERGLLPSCGDAAADAEDDEMAVRWAFNEARELLRDNEGMFEALRQRLETGGATVGECVSLIDR 368          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A4D9D6H3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6H3_9STRA)

HSP 1 Score: 230 bits (587), Expect = 7.940e-69
Identity = 131/352 (37.22%), Postives = 210/352 (59.66%), Query Frame = 1
Query:  115 TTASFERVMDGLSDNEKYNAVLQG-VSSLVMS--KKDRGAAAEG-----VFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGLVPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATD-PQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIE 1143
            +++ ++ +MD +SD+EKYN +LQ   SSLV S  KK RG           F  +++L++EM    ++ + R+ +A++DAA+ + ++++I + L   RR G+ R ++R VG L+  P      +R     VP D RT E+    + + +VG   S E VG ++H DTT  +++    A     D+ +R G    L L+G+NRLFL+D ER++ V+A  FL+AY+ GLPCF F P+ +EA+RM    P   +   +  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   R         ++   + WA+ EA+ LL+ +   L+ L++R+ESGGATVGDCV+++E
Sbjct:   19 SSSQYDELMDNMSDDEKYNILLQSRASSLVQSLGKKGRGMGGSSRSTSEAFTPLYKLVEEMTDKDMRITLRSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGALNPPPPLRAASDRYDLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVYMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 370          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: W7U4H7_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U4H7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 6.660e-67
Identity = 130/352 (36.93%), Postives = 210/352 (59.66%), Query Frame = 1
Query:  115 TTASFERVMDGLSDNEKYNAVLQG-VSSLV--MSKKDRGAAAEG-----VFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGLVPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATD-PQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIE 1143
            +++ ++ +MD LSD+EKYN +LQ   SSLV  + KK RG           F  +++L++EM    ++ + ++ +A++DAA+ + ++++I + L   RR G+ R ++R VG L+  P      +R     VP D RT E+    + + +VG   S E VG ++H DTT  +++    A     D+ +R G    L L+G+NRLFL+D ER++ V+A  FL+AY+ GLPCF F P+ +EA+RM    P   +   +  G++R+LV+LLA VA E   + Q++ASD RQA A LQ+   R         ++   + WA+ EA+ LL+ +   L+ L++R+ESGGATVGDCV+++E
Sbjct:  150 SSSQYDELMDNLSDDEKYNILLQSRASSLVQLLGKKGRGMGGNSRSTSEAFTPLYKLVEEMTDKDMRITLKSFAALIDAASLSRDLNVIQECLLLARRNGVSRAFARSVGTLNPPPPLRAASDRYDLSPVPSDARTSELAAGVAALTVVGGALSVEAVGPLLHADTTAASVVLGGAAVMGVWDLTQRKGQELTLALAGINRLFLRDPERDAHVQAATFLSAYLLGLPCFCFSPNVMEAVRMTAQVPAFAETLSSTAGLNRLLVYLLAPVAVEEANYAQLMASDARQARALLQVFMGRGEARGQEGREEEVLLPWAYEEAKRLLRSHSALLERLKQRMESGGATVGDCVALLE 501          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A0G4G463_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G463_VITBC)

HSP 1 Score: 222 bits (565), Expect = 5.940e-65
Identity = 129/350 (36.86%), Postives = 206/350 (58.86%), Query Frame = 1
Query:  133 RVMDGLSDNEKYNAVLQGVSSLVMSKKDRGAAAEGVFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSR----------DVGRLSLLPTNPFQKERALKGLVPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMH--YDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATDPQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIER 1146
            R++D L + +KYN + QG+   V++ K   A    + +E + LLDEM    +K + RT S +VDAA  T +   + ++L      G+   Y +          D GRL+ +  +           +P+D R++++  A++F+  VG+    E +G  ++  +D   PT+     AAA   D+ K  G  SK +++GL RL + D ER+ RVE+ AFL AY+ GLPCF F+P+ +EAL+MA DP++    L   GI ++LVWLLAGVA+E + H + I +DPRQ+ AF++++R ++    ++ E  S RV+WAF++A  LL+++    D LRRR+ES  ATVGDCV+ +E+
Sbjct:   79 RILDSLPEADKYNTLAQGLFRRVLNDKSPDARQSSL-QEGWTLLDEMRQKALKATPRTFSLLVDAAAVTNDAEAMKRSLELATGSGLSVVYGQADKGWEGSPVDAGRLASVTESLTD--------MPEDSRSKDVVVASAFMGYVGTGVGAETLGDYIYGDFDEIYPTVALLALAAAGVYDIVKGGGVVSKSVVAGLKRLLVDDKERQCRVESAAFLVAYLLGLPCFCFRPNVLEALKMAEDPRIRMDLLTPAGIDKLLVWLLAGVAAENLQHPECIVADPRQSDAFVKLMRDKDYLKGVDDETASLRVKWAFHKATNLLRKHRRVHDELRRRMESKAATVGDCVTFLEK 419          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A7S2H157_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H157_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.980e-61
Identity = 129/364 (35.44%), Postives = 203/364 (55.77%), Query Frame = 1
Query:  121 ASFERVMDGLSDNEKYNAVLQGVSSLVMSKKDRGAAAEGVFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGL--VPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAITAAAVAVDVWKR------------------SGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATDPQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPE-DDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIERR 1149
            +   + +D LS  ++Y+ VLQG+  L   K D  A       +V+ LL+EM     K + +T +A++D A  T +I+ +  +L   RR G+  +YS DV ++ L P    Q+++  + L  VP D R  E+ FA SF+  + +   W  +  ++H +  VPT    +    +  D +                     G  ++++L+GLNRLF +D+ RE R EA +FL AY+ GLP F   P+ +EA+++     +++  +   GI+RILVWLLA VA E   HRQ+I SDPR A A L+++R R  G D+  E DD+ RV+ A ++A +LL  +   LDALR R+ESG ATVG+CV ++E++
Sbjct:   69 SKLRKAIDNLSAGDRYDFVLQGM--LQQGKCDTSALTS----DVWPLLEEMTAAGKKMAIKTRAALLDVAAGTEDINAVDNSLKLSRRNGVLARYSMDVPKV-LPPLVERQRDKLDRTLPEVPIDSRELEVTFALSFVAFISASVGWGSIAPILHQEPLVPTWATFVAVLLLLADNFNALVSISKDGNFQLATLPQIGGDGTRVLLAGLNRLFTRDLTRECRCEAASFLVAYVLGLPSFSLNPTTLEAIKLTDVEPIKESLMTDAGINRILVWLLASVAVENAQHRQLIVSDPRNAPALLRLLRER--GVDVGEEEDDALRVRHALSQADLLLTRHGATLDALRERMESGAATVGNCVGLLEKQ 423          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A7S1XSQ6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSQ6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 3.010e-53
Identity = 108/289 (37.37%), Postives = 169/289 (58.48%), Query Frame = 1
Query:  313 AVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPFQKERALKGL--VPDDDRTQEIGFATSFILLVGSDFSWEGV------GQVMHYDTTVPTLIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRM--ATDPQLEDIF-LNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSREC-GCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIE 1143
            AV+D A AT     + + L  +R +G    Y     RL+ LP+NP ++ R L+GL  +P DDR +E+  + +F+   G     E          ++H    +P  + A++AAA  +D+W R G T   + SGL+RLF KD ER++R E+ + +  Y+ GLPCF F+PS  EAL +  A D  +++    N   ++R+LVWLLA VA E   + Q++ASDPRQA AFL +VR+R   G   +P++  + V+WA+ EAR L++ N+  +D +  R+E+   +VGDC +I +
Sbjct:    9 AVLDGAAATGTPLSVLRVLDALRPLGQATAYGGAAARLTPLPSNPERRRRTLEGLAPLPSDDRLKELWLSLAFMGYCGVGVGLEAAIPFTDDPNLLH-SGLLPDAMLALSAAAAGIDIWGRQGKTLLELRSGLSRLFYKDSERDARCESASLVVGYLLGLPCFAFRPSVQEALALLDAEDAAMQEALPRNAATVNRLLVWLLAPVAGEDTKYSQLLASDPRQAAAFLSLVRARGVDGAAYSPDEAGDMVKWAYGEARKLVRTNEVLIDRISERMETMQGSVGDCAAICD 296          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A8J2WW41_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW41_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.370e-40
Identity = 109/301 (36.21%), Postives = 152/301 (50.50%), Query Frame = 1
Query:  256 QLLDEMN-TNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNP--FQKERALKGLVPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPTLIGAIT-AAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATDPQLEDIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIER 1146
            QL++EM  TN  K   +   A+VDAA AT +   +   LT  +R G  R Y    G   L P++P  FQ        +P DDR  E   A + +  VG     E    +   D   P     +  AAA   D +   G  +K   +G++RL  +D  RE+  EA +F   Y  GLPCF F P+AVEA   A    + D  ++ N +  +LVWL A VA E   HR+++ASDPRQA AFL ++R R    D+N  +D+ R  WA  +A  LL+    +++ L    ESG AT GD V+ +ER
Sbjct:   68 QLIEEMAATNVGKVPAKVVGALVDAAVATKDARRVDAVLTVAKRSGGARSYGSAAGSPKLPPSSPQAFQSSLQQCPELPTDDRATETAAALAALACVGFPALAEVAASITGGDAPGPATFTLVADAAAFGADAYLLGGEIAKKAGAGVDRLLARDARREAECEAASFDLGYRLGLPCFAFSPTAVEAANAA----VVDGSVDENRVRALLVWLCAPVACERRKHRKLLASDPRQAVAFLTLLRGRGQFTDVNSNEDNAR--WALGDAARLLESRTRSVEELADFFESGVATAGDVVARLER 362          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: B8BZ34_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ34_THAPS)

HSP 1 Score: 154 bits (390), Expect = 1.010e-38
Identity = 126/415 (30.36%), Postives = 191/415 (46.02%), Query Frame = 1
Query:  127 FERVMDGLSDNEKYNAVLQGVSSLVMSKKDRGAAAEGVFEEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLP--TNPF--------QKERALKGL--VPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVP--TLIGAITAAAVAVD-------------------------------------VWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMATD-----PQLEDIF-LNGN--------GIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSRECGC--------DLNPEDD---SERVQWAFNEARILLKENDEALDALRRRLESGGATVGDCVSIIE 1143
             +     L+D +KY  VL G+ + V+     G A+EG+ + + +L++EMN++ I    R   ++VDA   T++  ++A  L+   + G    Y    G +S +P  TN F        Q ER L+ L  VPDDDR  E+  A  F  +VGS       G +   +   P   L+  IT   + VD                                     +   +G  +  ++ GLNRL   + ER+ + EA A  AAY  GLPCF FQP+A+E   +  D     P   D F + GN        G+ ++L+WL+A VA E   H Q+I+SDPR+A  FL+ +  +            D  P D+    + ++WA  EA +LL+ N   +D L   L  G ATVGDCV+++E
Sbjct:   98 LDMAFSSLNDEDKYETVLTGLCAKVIDG-GAGGASEGLVDPI-RLMEEMNSSGIGARPRGVISLVDATALTSDARVMANVLSLSIKNGAIANYGSLQGTISPVPQTTNAFPFGGGNKNQMER-LQSLPAVPDDDRATEVSQAVIFATVVGSCLGVNVFGGLFGLEDLTPLANLVLGITTTTLVVDNFFDVIVMGGSAVAKMNEDKIPEGAKGVSAPKKEDMPLGLGTGSITGSVVKGLNRLLSVNTERDCQCEAAAVFAAYSLGLPCFAFQPNALEGAALVVDSMRKEPNNSDGFQIQGNLDNLVSDVGLLKVLIWLMAPVAMEISKHPQLISSDPREALGFLKRLDEKAANLGYAEGALRDALPGDEVQTDDYLRWALGEADLLLRNNRRTVDLLSEALAGGAATVGDCVAVLE 509          
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Match: A0A7S2KXP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXP3_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.610e-37
Identity = 107/355 (30.14%), Postives = 175/355 (49.30%), Query Frame = 1
Query:  244 EEVFQLLDEMNTNKIKCSFRTTSAVVDAATATTNISIIAKALTKIRRVGMG--RKYSRDVGRLSLLPTNPFQKERALKGL--VPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPT---LIGAITAAAVAVDVWKRSGCTSKLI-------------------------LSGLNRLFLKDIERESRVEAGAFLAAYITGLPCFPFQPSAVEALRMAT---------DPQLE---------DIFLNGNGIHRILVWLLAGVASEGMVHRQMIASDPRQAHAFLQMVRSR----ECGCDLNPEDDSERVQWAFNEARILLKE-NDEALDALRRRLESGGATVGDCVSIIE 1143
            EE  +LL EMN+  +  ++R  SA++D A +  ++ +++  +T +RR        Y +    L+  PTN  +K++ L  +  +P DDR  EI  A S + +  + F  + + ++       P    ++ AI +  V  + +     T+ L+                         ++G NRLF +D ER    EA AFLAAY  GLPCF FQP+A+EA  +A          DP +          D  L+  G+ ++L+WL A VA E   H Q++ SDPR+A +FL  +R++      G  +  ++  + ++WA+ EA +L ++ N + L AL   L SG +T+GD V IIE
Sbjct:    6 EEPLKLLVEMNSRNVPVTYRACSALLDVAGSCEDVQVMSTVMTLLRRNRDSPINNYGQRQRDLTQYPTNQPKKQQRLSNVPKIPTDDRASEISSALSVLSVAAACFLADPLAKLFGGTDAGPLPNLVLFAIISVGVLDNFYDVLSGTANLVDKAPKMPEKGNLPLGLGNGQLTSNFVAGFNRLFTEDTERACEAEAAAFLAAYSLGLPCFAFQPNALEAAILAIESSQQPATDDPNINYLPPNSTNLDPLLSNEGVIKLLIWLYAPVAYENSKHPQLLYSDPREAASFLDRIRNKLSSSNIGHSVAIDEADDLMKWAYAEADMLQRQDNGQKLQALSEGLASGASTLGDIVGIIE 360          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig11614.1274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LH72_ECTSI4.370e-19477.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z355_9STRA1.360e-10348.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D6H3_9STRA7.940e-6937.22Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U4H7_9STRA6.660e-6736.93Uncharacterized protein n=3 Tax=Nannochloropsis ga... [more]
A0A0G4G463_VITBC5.940e-6536.86Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2H157_9STRA1.980e-6135.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XSQ6_9STRA3.010e-5337.37Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2WW41_9STRA2.370e-4036.21Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B8BZ34_THAPS1.010e-3830.36Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2KXP3_9STRA2.610e-3730.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig11614contigH-elongata_contig11614:3458..5782 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score553.9
Seed ortholog evalue5.9e-155
Seed eggNOG ortholog2880.D8LH72
EggNOG OGs2DR9F@1,2S6DN@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-24_000800.1
Exons6
Model size1157
Cds size1155
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig11614.1274.1prot_H-elongata_contig11614.1274.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig11614 3458..5782 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929674.9767363-CDS-H-elongata_contig11614:3457..36351622929674.9767363-CDS-H-elongata_contig11614:3457..3635Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 3458..3635 -
1691679115.0384362-CDS-H-elongata_contig11614:3457..36351691679115.0384362-CDS-H-elongata_contig11614:3457..3635Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 3458..3635 -
1622929674.9956458-CDS-H-elongata_contig11614:3842..40101622929674.9956458-CDS-H-elongata_contig11614:3842..4010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 3843..4010 -
1691679115.0503426-CDS-H-elongata_contig11614:3842..40101691679115.0503426-CDS-H-elongata_contig11614:3842..4010Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 3843..4010 -
1622929675.0112062-CDS-H-elongata_contig11614:4174..45061622929675.0112062-CDS-H-elongata_contig11614:4174..4506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 4175..4506 -
1691679115.060701-CDS-H-elongata_contig11614:4174..45061691679115.060701-CDS-H-elongata_contig11614:4174..4506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 4175..4506 -
1622929675.0304286-CDS-H-elongata_contig11614:4808..49211622929675.0304286-CDS-H-elongata_contig11614:4808..4921Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 4809..4921 -
1691679115.0684123-CDS-H-elongata_contig11614:4808..49211691679115.0684123-CDS-H-elongata_contig11614:4808..4921Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 4809..4921 -
1622929675.0476532-CDS-H-elongata_contig11614:5272..55311622929675.0476532-CDS-H-elongata_contig11614:5272..5531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 5273..5531 -
1691679115.0762045-CDS-H-elongata_contig11614:5272..55311691679115.0762045-CDS-H-elongata_contig11614:5272..5531Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 5273..5531 -
1622929675.0598109-CDS-H-elongata_contig11614:5677..57821622929675.0598109-CDS-H-elongata_contig11614:5677..5782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 5678..5782 -
1691679115.083641-CDS-H-elongata_contig11614:5677..57821691679115.083641-CDS-H-elongata_contig11614:5677..5782Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig11614 5678..5782 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig11614.1274.1

>prot_H-elongata_contig11614.1274.1 ID=prot_H-elongata_contig11614.1274.1|Name=mRNA_H-elongata_contig11614.1274.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=385bp
SIALAVQHVKPHRPKAVTNMTLQRRELKRDLQPDQLSTTTASFERVMDGL
SDNEKYNAVLQGVSSLVMSKKDRGAAAEGVFEEVFQLLDEMNTNKIKCSF
RTTSAVVDAATATTNISIIAKALTKIRRVGMGRKYSRDVGRLSLLPTNPF
QKERALKGLVPDDDRTQEIGFATSFILLVGSDFSWEGVGQVMHYDTTVPT
LIGAITAAAVAVDVWKRSGCTSKLILSGLNRLFLKDIERESRVEAGAFLA
AYITGLPCFPFQPSAVEALRMATDPQLEDIFLNGNGIHRILVWLLAGVAS
EGMVHRQMIASDPRQAHAFLQMVRSRECGCDLNPEDDSERVQWAFNEARI
LLKENDEALDALRRRLESGGATVGDCVSIIERRT*
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mRNA from alignment at H-elongata_contig11614:3458..5782-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig11614.1274.1 ID=mRNA_H-elongata_contig11614.1274.1|Name=mRNA_H-elongata_contig11614.1274.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2325bp|location=Sequence derived from alignment at H-elongata_contig11614:3458..5782- (Himanthalia elongata Himel1 dioecious)
TCCATCGCTCTGGCAGTGCAACATGTTAAGCCGCATCGACCGAAGGCTGT CACAAACATGACGCTTCAAAGGAGGGAGTTGAAGAGGGACCTCCAACCAG ACCAGGTCAGGGCAAGCATTCAGTTCGTGTTAATAAATCTACAGAAATAA TATCTAGCTTGGCGCTCGATCGGTCTCTTTGAATACCCACAATTCAGCTG GTGACAGCAACTGAAAATGTGTAGCATGTTTCCTTTTAACCTCCTCGACA GTTGTCTACTACTACAGCGTCGTTCGAGCGCGTTATGGATGGCCTCAGCG ACAACGAAAAGTACAATGCAGTATTGCAAGGCGTTTCCAGTCTGGTGATG AGCAAGAAGGATAGGGGCGCCGCGGCGGAGGGTGTATTCGAGGAGGTGTT TCAGCTACTCGATGAAATGAACACGAACAAGATTAAGTGCAGTTTCCGAA CGACATCCGCAGTTGTTGACGCCGCTACCGCCACGACGAACATCAGCATC ATCGCGAAAGGTTCATTACAGTCCTTTCTCCAGCCTAAAGTGCACTATAT CCCTCGATGTTGGATGAGTGAGGATGATTATCTCCCGAGTCCTGAAACTT GCGAGATTAAAGCGCTATTCGTAGTTTCCTTACTCTCGGGGGCATGAATC ATGCGTCCTCCTTCGAGTTGAATTCAACCCTTGGAGCTTTACACGTATTT AGAGCAACGCGATTTGTTTTTAATAACTCCGGTCTCCTTTCAAAGTCAGA TATATCTACTTGGGAGACATCGCTAGTGCGTCCAAGCCCCCCCCCCATGG GAGAATAACTGTATATTTTCTATCATCTTCCTTCCGGGGTGTACTTTTCC TCGCCGTCCAGCATTGACGAAGATTCGACGCGTGGGGATGGGGCGAAAAT ATTCACGTGACGTCGGACGGCTATCTTTGCTGCCCACTAACCCTTTTCAG AAGGAAAGAGCGCTCAAAGGACTTGTACCGGCGAGTAAAATGAATCCTTG CCCAATACGCGAGATTACCGTGATGTGTAATATTATCCATGTCTTAGGAG ACCCCAGTCGATTCCACCTTTTCAGCTGACATTCACTTTTCCTACGCTTG TTTTGTCTGGCTACCGATTACACAACCTTGCGCACGGGATACATCAATAT GAAGATTATGTTTGCCTTGAAAAACAGGGTAGGCACGGTTGTTCATGAGA ATATCCCGCCAAGCGCTAGACACAGATTGAGCGCACAGTTACTTCGGGCA TTTCTGTTTACTACTGCTTTTCTCAGGTTCCTGATGACGACCGAACCCAG GAAATCGGGTTTGCTACATCATTCATTTTGCTTGTGGGCTCTGATTTCTC TTGGGAAGGAGTCGGGCAAGTGATGCATTATGACACCACCGTTCCGACAC TCATCGGGGCAATAACTGCTGCTGCTGTAGCTGTCGATGTATGGAAGAGA TCAGGATGCACGTCGAAGCTAATCCTCAGCGGCTTAAACAGATTATTTCT AAAGGATATCGAGCGTGAAAGCCGCGTCGAGGCAGGTGCCTTCCTGGCAG CGTACATCACTGGTTTACCATGCTTTCCCTTCCAACCCAGTGCGGTCGAG GCTCTTAGGTGAGTTGTGAAGAATCTCTGGTCGCTACTCCGTTGTCCTCG CCCAATCTTTACGCCTGGAGCGAACCGTATTCTGGGAATAATATCTGCTG TGGCGAGCAAGGGTTAGCACACTCCCTCCACACTTTTAAGCTTCACATCT TATGAACGCCGACGTCGCTCAGGATGGCTACTGATCCACAACTCGAGGAC ATTTTCTTGAACGGCAACGGGATACACCGAATCCTTGTTTGGCTCTTAGC TGGTGTGGCGAGCGAGGGGATGGTACATCGACAGATGATCGCGAGCGATC CCCGTCAAGCACATGCCTTCCTCCAGATGGTTCGAAGTCGGTAAGCTTCA GCAGTGTGGATGTTAAAGCGTTTTAGACACAAGCAAGAGTAGCTCAGCCA GGCGCCCAATCGACTCTATGAAACTTGTTTTATGTATGTGATTCAAGTTT TGAGTTTTAAAATATTTGATTGGTTCAATGGGTGTTGATGTTTTGATTGC AGGGCGTTTTTCGTTTTCCAACATCTCCTTGTCGTAATCTACTCTAGGGA ATGCGGATGCGACCTGAACCCTGAAGACGACTCAGAACGTGTTCAGTGGG CTTTCAACGAAGCGAGGATATTGCTGAAGGAGAACGATGAAGCATTAGAC GCCTTGAGACGACGACTGGAAAGCGGAGGCGCTACGGTTGGCGATTGCGT ATCAATTATTGAACGCCGAACATAA
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Coding sequence (CDS) from alignment at H-elongata_contig11614:3458..5782-

>mRNA_H-elongata_contig11614.1274.1 ID=mRNA_H-elongata_contig11614.1274.1|Name=mRNA_H-elongata_contig11614.1274.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2310bp|location=Sequence derived from alignment at H-elongata_contig11614:3458..5782- (Himanthalia elongata Himel1 dioecious)
TCCATCGCTCTGGCAGTGCAACATGTTAAGCCGCATCGACCGAAGGCTGT
CACAAACATGACGCTTCAAAGGAGGGAGTTGAAGAGGGACCTCCAACCAG
ACCAGTCCATCGCTCTGGCAGTGCAACATGTTAAGCCGCATCGACCGAAG
GCTGTCACAAACATGACGCTTCAAAGGAGGGAGTTGAAGAGGGACCTCCA
ACCAGACCAGTTGTCTACTACTACAGCGTCGTTCGAGCGCGTTATGGATG
GCCTCAGCGACAACGAAAAGTACAATGCAGTATTGCAAGGCGTTTCCAGT
CTGGTGATGAGCAAGAAGGATAGGGGCGCCGCGGCGGAGGGTGTATTCGA
GGAGGTGTTTCAGCTACTCGATGAAATGAACACGAACAAGATTAAGTGCA
GTTTCCGAACGACATCCGCAGTTGTTGACGCCGCTACCGCCACGACGAAC
ATCAGCATCATCGCGAAAGTTGTCTACTACTACAGCGTCGTTCGAGCGCG
TTATGGATGGCCTCAGCGACAACGAAAAGTACAATGCAGTATTGCAAGGC
GTTTCCAGTCTGGTGATGAGCAAGAAGGATAGGGGCGCCGCGGCGGAGGG
TGTATTCGAGGAGGTGTTTCAGCTACTCGATGAAATGAACACGAACAAGA
TTAAGTGCAGTTTCCGAACGACATCCGCAGTTGTTGACGCCGCTACCGCC
ACGACGAACATCAGCATCATCGCGAAAGCATTGACGAAGATTCGACGCGT
GGGGATGGGGCGAAAATATTCACGTGACGTCGGACGGCTATCTTTGCTGC
CCACTAACCCTTTTCAGAAGGAAAGAGCGCTCAAAGGACTTCATTGACGA
AGATTCGACGCGTGGGGATGGGGCGAAAATATTCACGTGACGTCGGACGG
CTATCTTTGCTGCCCACTAACCCTTTTCAGAAGGAAAGAGCGCTCAAAGG
ACTTGTTCCTGATGACGACCGAACCCAGGAAATCGGGTTTGCTACATCAT
TCATTTTGCTTGTGGGCTCTGATTTCTCTTGGGAAGGAGTCGGGCAAGTG
ATGCATTATGACACCACCGTTCCGACACTCATCGGGGCAATAACTGCTGC
TGCTGTAGCTGTCGATGTATGGAAGAGATCAGGATGCACGTCGAAGCTAA
TCCTCAGCGGCTTAAACAGATTATTTCTAAAGGATATCGAGCGTGAAAGC
CGCGTCGAGGCAGGTGCCTTCCTGGCAGCGTACATCACTGGTTTACCATG
CTTTCCCTTCCAACCCAGTGCGGTCGAGGCTCTTAGGTTCCTGATGACGA
CCGAACCCAGGAAATCGGGTTTGCTACATCATTCATTTTGCTTGTGGGCT
CTGATTTCTCTTGGGAAGGAGTCGGGCAAGTGATGCATTATGACACCACC
GTTCCGACACTCATCGGGGCAATAACTGCTGCTGCTGTAGCTGTCGATGT
ATGGAAGAGATCAGGATGCACGTCGAAGCTAATCCTCAGCGGCTTAAACA
GATTATTTCTAAAGGATATCGAGCGTGAAAGCCGCGTCGAGGCAGGTGCC
TTCCTGGCAGCGTACATCACTGGTTTACCATGCTTTCCCTTCCAACCCAG
TGCGGTCGAGGCTCTTAGGATGGCTACTGATCCACAACTCGAGGACATTT
TCTTGAACGGCAACGGGATACACCGAATCCTTGTTTGGCTCTTAGCTGGT
GTGGCGAGCGAGGGGATGGTACATCGACAGATGATCGCGAGCGATCCCCG
TCAAGCACATGCCTTCCTCCAGATGGTTCGAAGTCGGATGGCTACTGATC
CACAACTCGAGGACATTTTCTTGAACGGCAACGGGATACACCGAATCCTT
GTTTGGCTCTTAGCTGGTGTGGCGAGCGAGGGGATGGTACATCGACAGAT
GATCGCGAGCGATCCCCGTCAAGCACATGCCTTCCTCCAGATGGTTCGAA
GTCGGGAATGCGGATGCGACCTGAACCCTGAAGACGACTCAGAACGTGTT
CAGTGGGCTTTCAACGAAGCGAGGATATTGCTGAAGGAGAACGATGAAGC
ATTAGACGCCTTGAGACGACGACTGGAAAGCGGAGGCGCTACGGTTGGCG
ATTGCGTATCAATTATTGAACGCCGAACATAAGGAATGCGGATGCGACCT
GAACCCTGAAGACGACTCAGAACGTGTTCAGTGGGCTTTCAACGAAGCGA
GGATATTGCTGAAGGAGAACGATGAAGCATTAGACGCCTTGAGACGACGA
CTGGAAAGCGGAGGCGCTACGGTTGGCGATTGCGTATCAATTATTGAACG
CCGAACATAA
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