mRNA_H-elongata_contig53799.12738.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: D7G1B5_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B5_ECTSI) HSP 1 Score: 327 bits (838), Expect = 2.130e-107 Identity = 169/237 (71.31%), Postives = 193/237 (81.43%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESG-----------TDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
A+ANG+FAFGVYVGGGLSSLSI MA+ IGWRGSA+ VA +GL+LS LVR TV+EP R PA ++ A E G +K++T ++S+KLIF PLI LL+ GGM+RFMAGYAIGSYLPDF+SQIYP DNTIYSYLNASVVSVGGALSS+ GGYAADRWEKAG+ RAR+YIPAIGALLGAPTFFLVI PNFY +MFFLF+EYLVAECWFGPAISVLQK+LP RVR
Sbjct: 153 AQANGVFAFGVYVGGGLSSLSIAMAQGIGWRGSAFTVAGYGLLLSLLVRFTVREPARTPAVTAPAPANRTSEAEEGGGYAPTNGSSGDAEKDYTARESAKLIFGNPLIVLLIFGGMVRFMAGYAIGSYLPDFFSQIYPDDNTIYSYLNASVVSVGGALSSYAGGYAADRWEKAGQHRARMYIPAIGALLGAPTFFLVIVTPNFYGAMFFLFVEYLVAECWFGPAISVLQKALPARVR 389
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A7S2XUC5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUC5_9STRA) HSP 1 Score: 230 bits (586), Expect = 9.680e-70 Identity = 119/226 (52.65%), Postives = 153/226 (67.70%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
AKANGIFAFGVYVGGGL S+SI MA +GWRG+ + VA FG +L+ +V T+KEP R+ +ST ++ S D+ + ++ IF L+ + + +RFM GYAIGSY+ F++ YP NTIYSYLNASVV+ GGA SSF GG+AAD WEK+G+ AR++IPAIGA+ P + + NFY SM LF EYL AECWFGP +SVLQ +L PRVR
Sbjct: 172 AKANGIFAFGVYVGGGLGSMSIAMALGMGWRGATFIVAIFGFILAGVVLSTIKEPQRSAGDKASTK------SQSSSDDEKVSVVEAFNEIFSSSLVVTIFIASSIRFMGGYAIGSYMAVFFADSYPEYNTIYSYLNASVVACGGAASSFFGGWAADEWEKSGQRNARVWIPAIGAIASLPFMMMCVLSGNFYLSMAGLFFEYLFAECWFGPIMSVLQSALSPRVR 391
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A7S2Y1D3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1D3_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.040e-59 Identity = 104/225 (46.22%), Postives = 149/225 (66.22%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRV 675
A ANGIFA+GVY+GGGLSSLSI MA+ IGWR + + VA G VL+A+ LTV+EP R D ++ +++ + +S K + LI L+ G +R++ G AI +YLP ++ +P + YSY+NASVV+ GGALSS++GG+ ADRWE +G AR+++PA+G+LL P L +A NF+ +M L+ E+L AECWFGP +SV+Q +LPPR+
Sbjct: 151 ATANGIFAWGVYLGGGLSSLSITMAESIGWRSTTFLVAMVGFVLAAVFVLTVQEPTR------------HDVPNDTPKEESLSMIESFKKVLSNRLIITLLAAGTMRYIGGNAISAYLPVYFDAAFPEQSKAYSYINASVVAFGGALSSYMGGWIADRWEMSGGRHARVWVPALGSLLACPFVVLTMAASNFHVAMMGLYFEFLFAECWFGPTMSVIQSTLPPRL 363
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A836CG38_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG38_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.020e-59 Identity = 110/229 (48.03%), Postives = 142/229 (62.01%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDKN---FTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
A+ANG+FAFG+YVGGG+ SLS+ MA GWR + Y A G L+ L R TV+EP R+ A S + ++++ I + L+ LML +RFMAGY+IGSY+P FY +P D +YSYLNASVV+VGGALS++ GG AAD+W +G+ RA L +PAIGA P L + P+F SM LFLEYL AECWFGPA+S LQ +LP R
Sbjct: 143 AEANGVFAFGIYVGGGMGSLSLAMAMAFGWRATCYAAAASGGALALLTRATVREPPRSGAXXXSLKPHVEQPLXXXXXXXXXXALSLAEAARAIAGRRLVVALMLASCVRFMAGYSIGSYMPVFYRARFPDDAALYSYLNASVVAVGGALSAYFGGLAADKWGASGQRRANLLVPAIGAAAAVPALALALYAPSFGLSMAGLFLEYLAAECWFGPAMSALQGALPAGAR 371
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A835YUX0_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX0_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.850e-49 Identity = 91/228 (39.91%), Postives = 134/228 (58.77%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDK--NFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
A+ANG++A G+Y+G + S S+ +A +GWR Y A GLVL+ L+ ++V+EP R + + S T Q+ + + + L+ ++ M+R+MAGY IG+++P FY +P D +YSYLNAS++++GGA+S+++GG ADRW AG+ RA L IP GA P + P+F SM LF EYL AE W GPA+S LQ +LPP R
Sbjct: 147 AEANGVYAVGMYMGASMGSFSLSIAMAVGWRNVCYGCAASGLVLAMLLLMSVREPQRVKKLADAACGAPVASXXXXXXXXXLKLTLPQALRAVLSRRLVLAIIAAAMVRYMAGYTIGTFMPVFYGARFPDDADVYSYLNASIIAIGGAVSAYVGGRTADRWAAAGQRRAYLLIPGAGAAAAVPLLAAALYAPSFGLSMAALFAEYLCAEVWSGPAVSALQGALPPGAR 374
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A7S4E4V1_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4V1_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.110e-45 Identity = 87/222 (39.19%), Postives = 133/222 (59.91%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFF-LFLEYLVAECWFGPAISVLQKSL 663
++ANG+FA GVY+GGG++S+ I M+ +GWR + + +AT G +S + ++++EP R S + KNF Q+ IF L+ L+ LR+M GY I YLP ++ ++P+ + YSY+NA VV+ GG +SS+LGG AD+W +A E RAR+Y+P G P + +FY S+F LF+EYL+AECWFGP ++ +Q +L
Sbjct: 165 SQANGLFACGVYIGGGMASMCISMSADLGWRNTCFLIATIGFCISVIEVVSIREPQRPSRKSKLPALNAEGGHIPAAAKKNFV--QAIWAIFSNELVVLVFAASSLRYMGGYVIAGYLPALFASVFPNFDDQYSYINAYVVAGGGFISSWLGGMLADKW-RAVEPRARMYLPVCGCFGSLPFMAICCLASDFYVSIFLGLFVEYLIAECWFGPVVATMQSAL 383
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A7S3PPS4_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PPS4_9STRA) HSP 1 Score: 167 bits (422), Expect = 2.660e-45 Identity = 95/258 (36.82%), Postives = 140/258 (54.26%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRA-PATSSS-------------------------------TXXXXXDSARESGTDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
A ANGIF+ GVYVGGGLSSLS++++ IGWR +++ ++ + KEP A P S + DSA S K KQ+++++F + + + LRF G+AI S+LP F+ + YP +N +Y LNA VVSVGGALS+ LGG+ D++ + + R +++IPA+ +LG FF+V+ NFY SM LF EY++AECWFGP I+++Q +P R
Sbjct: 193 AFANGIFSLGVYVGGGLSSLSLLLSTCIGWRETSFVISICSFAIGLGTMALTKEPRYANPKVSQAENDITQHELLLSDNEGTRGRGYEAIESSLDENTDELNDSAVNSLDVKKAALKQAARMVFSDSCVCFIFVASGLRFFGGFAIASFLPIFFKRKYPDENVLYGTLNAFVVSVGGALSATLGGWVTDKYSQVFDERVKVWIPAVAFVLGFGPFFVVLFADNFYLSMAALFFEYILAECWFGPVIAIIQNRIPAEAR 450
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A7S2WU90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU90_9STRA) HSP 1 Score: 154 bits (390), Expect = 9.440e-41 Identity = 98/249 (39.36%), Postives = 133/249 (53.41%), Query Frame = 1
Query: 4 KANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRA------------PATSSSTXXXXXDSARESGTDKNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKA-----------GETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFF-LFLEYLVAECWFGPAISVLQKSLPPRVR 678
+ANGIFA GVYVGGGL+S+S +A+++GWR + Y A G +L L+ T+ EP R A S + E + + T K + P +L + +RFM GYAI YLP FY + S +T YSY+NA VV+ GG SS+ GG W+++ G +A Y+P IGALLG P + +FY S+ LFLEYLVAECWFGP +S LQ+ +PP +R
Sbjct: 152 QANGIFASGVYVGGGLASISESLAEEMGWRYTCYLTAAVGGLLCTLLLCTMSEPPRQNLDEMDKIEEEDEAVQGSQEATEVEEQAEKPSQQQSTLSVI-KWLLTDPHTLVLFIAASVRFMGGYAIAGYLPYFYDYAFSSYSTQYSYINAYVVAFGGFCSSWGGGKITTLWKESANHEDPSRRWPGAEKANYYVPMIGALLGIPFICICCLASDFYVSLCVGLFLEYLVAECWFGPYMSALQEGVPPTMR 399
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: D8LBY9_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY9_ECTSI) HSP 1 Score: 154 bits (388), Expect = 5.360e-40 Identity = 86/235 (36.60%), Postives = 134/235 (57.02%), Query Frame = 1
Query: 7 ANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPHRAPATSSSTXXXXXDSARESGTDKNF-----------TFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
AN I++ GVY+GG L+SLS+++ IGWR S VA G+ ++ L L ++EP R T+ D+ DK +F+++ ++F+ ++L+ L RF AG+ IG + F+ +PS+++ Y+ LNA VV+ GG LSSFLGG +D++ + R R ++P G +L P + V+ NFY S+ FL EY+ AECWFG +++LQ+ LPP VR
Sbjct: 276 ANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPTREFPTAGEPGAGAGDNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVE-DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVR 509
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Match: A0A2R5G269_9STRA (Hexuronate transporter n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G269_9STRA) HSP 1 Score: 152 bits (383), Expect = 1.470e-39 Identity = 93/271 (34.32%), Postives = 143/271 (52.77%), Query Frame = 1
Query: 1 AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLTVKEPH----RAPATSSSTXXXXXDSARESGTD-----------------------------------------KNFTFKQSSKLIFQKPLIQLLMLGGMLRFMAGYAIGSYLPDFYSQIYPSDNTIYSYLNASVVSVGGALSSFLGGYAADRWEKAGETRARLYIPAIGALLGAPTFFLVIAVPNFYASMFFLFLEYLVAECWFGPAISVLQKSLPPRVR 678
A+ANGI++FG+Y+G GLSSLS++MA+ GWR ++ + ++ S L+ + V EP APA ++T + A SG++ K + + +I L + LRF+ G+A+G++LP ++++ +PS ++ YS LNA ++SV GA S++LGG+ +DRW + + R ++PAI G F V+ NFY +MF L LEYL+AE WFGPAIS+LQ LP VR
Sbjct: 182 AQANGIYSFGIYLGNGLSSLSLVMAQLFGWRAASLVIGFASMLSSLLLAVFVSEPRFDATAAPAAVAATVSTSSEQASVSGSNHGAQTPLLQDHDHHREGESHADAGEHDEECELPXXXPVTQGKAMSLGATLSIIVSDRPTLFLFIAAPLRFLGGFAVGAFLPQYFNRRFPSYSSQYSTLNAILLSVAGASSAYLGGFLSDRWRRT-DPRGAAWVPAIAGACGFIPFLGVLFADNFYLAMFSLMLEYLIAEGWFGPAISILQSRLPGTVR 451 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53799.12738.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53799.12738.1 >prot_H-elongata_contig53799.12738.1 ID=prot_H-elongata_contig53799.12738.1|Name=mRNA_H-elongata_contig53799.12738.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp AKANGIFAFGVYVGGGLSSLSIIMAKKIGWRGSAYFVATFGLVLSALVRLback to top mRNA from alignment at H-elongata_contig53799:58..3622+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53799.12738.1 ID=mRNA_H-elongata_contig53799.12738.1|Name=mRNA_H-elongata_contig53799.12738.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3565bp|location=Sequence derived from alignment at H-elongata_contig53799:58..3622+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53799:58..3622+ >mRNA_H-elongata_contig53799.12738.1 ID=mRNA_H-elongata_contig53799.12738.1|Name=mRNA_H-elongata_contig53799.12738.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig53799:58..3622+ (Himanthalia elongata Himel1 dioecious)back to top |