prot_H-elongata_contig5365.12721.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5365.12721.1
Unique Nameprot_H-elongata_contig5365.12721.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length242
Homology
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: D8LS71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS71_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 4.220e-128
Identity = 187/227 (82.38%), Postives = 200/227 (88.11%), Query Frame = 0
Query:    1 MQFGGTFLVGV-VLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGASCLYYVLADPHGYLSPEAAFPLSWLGSWSVAHGGGPSTEAAAMVAVYVTANHLLDYFIPDY-EDPLCVAFKWCLKLLGVTSMVNPA 225
            MQFGGTFLVGV VLGQTPSW+ SFTAWPALA+ WWLTFFSPWD WHGRA  +KA +F+AAFGRAVSASHAITSWGADKALTAHFEKA+MSA CTILCG LAGCGGGILADLLNL+GDSW LQRTP ALASPSFSVQRCFGASCLYY+LADPHGYLS EA FPLS LG  SV HG GPSTEAAAMVAVYVTANHL+DYFIP Y +DPLC  F   L LLGV +MV+P+
Sbjct:  114 MQFGGTFLVGVLVLGQTPSWMHSFTAWPALAVAWWLTFFSPWDLWHGRAMSNKACMFLAAFGRAVSASHAITSWGADKALTAHFEKAKMSAICTILCGTLAGCGGGILADLLNLDGDSWNLQRTPQALASPSFSVQRCFGASCLYYLLADPHGYLSEEAPFPLSLLGRLSVDHGNGPSTEAAAMVAVYVTANHLMDYFIPRYNQDPLCKLFSVILGLLGVRAMVDPS 340          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A7S0E304_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E304_9CRYP)

HSP 1 Score: 106 bits (264), Expect = 1.730e-23
Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = 0
Query:    3 FGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKAL-TAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDS--WKLQRTPGALASPSFSVQRCFGASCLYYVLADPHGYL 154
            FGGT +  + LGQ P W+ S ++  A  L +WL F  P +  +   +RH++V  V  +  + S  HA +SWGAD AL +AH      S    I CG++AGCGGGILA+ L + G S  W    TP  L  PS +V+  F ASC+YY+L +PH +L
Sbjct:   85 FGGTTVAALFLGQPPGWMGSLSSPFAFLLAFWLIFCCPGNVPYKIISRHRSVELVFGYINSFSCGHATSSWGADGALNSAHMVVG--SGPMAIFCGMIAGCGGGILANWLGMIGKSSDWMFG-TPPVLKGPSITVRTAFFASCIYYLLRNPHEFL 236          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A482SCI6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCI6_9ARCH)

HSP 1 Score: 103 bits (258), Expect = 1.220e-22
Identity = 66/162 (40.74%), Postives = 90/162 (55.56%), Query Frame = 0
Query:    1 MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKAL--TAHFEKARMSAG---CTILCGILAGCGGGILADLLNL--EGDSWKLQRTPGALA----SPSFSVQRCFGASCLYYVLADPH 151
            MQFGGT + G +LGQTPSWI S +A+PA+AL WWLTF+ P D +      +  ++FV     AVS++HA++SWG DKAL    H  K  +S     CT L G  +  GGGIL D+L       S+   RTP          S ++ +    + +YY L +PH
Sbjct:  106 MQFGGTTITGFLLGQTPSWIMSKSAFPAMALAWWLTFYCPGDVFWKAIKNNSILLFVLGMFGAVSSAHAVSSWGVDKALFNAFHVNKEGISKAYMVCT-LSGAFSASGGGILTDVLGFFRPNKSFVPFRTPSLFMIDFYEASATINKALLLAVVYYSLVNPH 266          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A7S0W3X9_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W3X9_9CRYP)

HSP 1 Score: 104 bits (260), Expect = 1.220e-22
Identity = 65/155 (41.94%), Postives = 83/155 (53.55%), Query Frame = 0
Query:    2 QFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGASCLYYVLADPHGYLSP 156
            QFGGT    V+LGQ PSW        A  L WWLTF SP D W   A + +AV         +SA+HA+TSWG +KAL+A   + R SA   + CG L+GC G  L       G+  +L R       PS+++QR F A   YY L +PHG L+P
Sbjct:  171 QFGGTTSTAVLLGQNPSWAAGNHVTNAFLLAWWLTFCSPGDVWF-EAMKLRAVRLPLQAVACISAAHAVTSWGLEKALSAEHTRMRGSAWGALACGYLSGCFGWPLVAFFETGGE--RLTRL-----GPSWAMQRTFYAVLAYYALTNPHGTLTP 317          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: F0Y383_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y383_AURAN)

HSP 1 Score: 105 bits (262), Expect = 3.070e-22
Identity = 67/160 (41.88%), Postives = 87/160 (54.37%), Query Frame = 0
Query:    1 MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGASCLYYVLADPHGYLSPEAAF 160
            MQFGGT LVG++LGQ PSW  S  A  +L L +WLT+  P D W         +    A G A+S+ HAITSWG DKAL A   +A+ +    ++ G L   GGG+LA LL+  G+    QR+ GA         R    S  YY+L DPHG L+ E  +
Sbjct:  913 MQFGGTTLVGLLLGQPPSWTLSHNAPRSLLLAFWLTWSCPGDLWTTAYRNSFVLRLFFATGAALSSGHAITSWGQDKALNAFHVQAQGAVFSALIAGALGASGGGLLAALLDPFGERPVGQRSYGAFL-------RAAVGSVAYYLLRDPHGVLADEYGY 1065          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A8J2SHU2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHU2_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.340e-21
Identity = 67/163 (41.10%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    1 MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGA--SCLYYVLADPHGYLSPEAAFP 161
            MQFGGT LVG++LGQ  SW TS TA  +L L +WL+   P D ++ R  +HK +  + A G A+S  HA+TSWGADKA++A   K R S   T++ G     GGG+    L+L G+     R  G   S +  +   FGA  S  YY++ +PHG    E   P
Sbjct:  116 MQFGGTTLVGLLLGQPASWTTSPTACRSLLLAFWLSVSCPLDLFY-RMYQHKIIKSMIAIGAALSTGHAVTSWGADKAISAIHPKPRSSVFSTLMAGAFGASGGGLSVHALDLWGE-----RRRGKERSYAAFL---FGAVASVSYYLMRNPHGVFEYEPLAP 269          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A7S4FA57_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FA57_CHRCT)

HSP 1 Score: 87.4 bits (215), Expect = 7.430e-17
Identity = 56/155 (36.13%), Postives = 77/155 (49.68%), Query Frame = 0
Query:    2 QFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILAGCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGASCLYYVLADPHGYLSP 156
              GG+ ++  ++GQ   W+      PA  + W L   SP D  +   +R  AV  V      ++   AIT+WG +K + A     R SA   ILCG +AGCGGG+L D  +L    WKL +TP AL + SF+         L Y L DPH  +SP
Sbjct:   82 SLGGSMIMCFLVGQPCGWLCDNVTLPAYIVAWALLHHSPNDIVYRVFSRSPAVATVLRMLDDLTWGVAITTWGMEKTIGAAHLAPRGSAVAAILCGTIAGCGGGLLCDTASLMSTEWKL-KTPQALRTVSFAPTTALCCCVLAYALRDPHNVVSP 235          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A5A8CI99_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CI99_CAFRO)

HSP 1 Score: 69.7 bits (169), Expect = 4.630e-10
Identity = 43/133 (32.33%), Postives = 70/133 (52.63%), Query Frame = 0
Query:    1 MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSW----HGRATRHKAVVFVAAFGRAVSASHAITSWGADKALT---AHFEKARMSAGCTI--LCGILAGCGGGILADLLNLEGDSWKLQRTP 124
            + FGGT + G++ G++PSW+TS+ +  A+ + W+LTFF P+D W    +        VVF      ++S ++ I + G  K L     HF     +    +  +CGI++GCGGG+L++  N   D     R P
Sbjct:   77 VHFGGTTMTGIMTGKSPSWVTSYESLLAVIVSWYLTFFCPFDLWWRVYNVPWVNRACVVF-----ESISLANGIGNLGVGKVLDHSRGHFAHPGTAPSPVLGWVCGIMSGCGGGVLSEFANFVDDPTPHSRRP 204          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A7S0UDZ5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UDZ5_HEMAN)

HSP 1 Score: 63.5 bits (153), Expect = 1.530e-8
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 0
Query:    2 QFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATRHKAVVFVAAFGRAVSASHAITSWGADKALTA 81
            QFGGT    + LGQ  SW        A  L WWLTF  P D W   A +++A+         VSA+HA+TSWG +KAL+A
Sbjct:  143 QFGGTTSTAIFLGQNASWTAGNHVTNAFLLAWWLTFCCPMDLWF-TAMQYRAMRLPVQAVACVSAAHAVTSWGLEKALSA 221          
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Match: A0A7S2DJ93_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DJ93_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.430e-8
Identity = 23/40 (57.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:    1 MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSP 40
            +QFGGT    ++LGQ+PSW++S TA+P+L +CWWL+FF P
Sbjct:   88 LQFGGTTCTALILGQSPSWLSSATAFPSLLVCWWLSFFCP 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5365.12721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LS71_ECTSI4.220e-12882.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0E304_9CRYP1.730e-2341.94Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A482SCI6_9ARCH1.220e-2240.74Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S0W3X9_9CRYP1.220e-2241.94Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
F0Y383_AURAN3.070e-2241.88Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8J2SHU2_9STRA2.340e-2141.10Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S4FA57_CHRCT7.430e-1736.13Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A5A8CI99_CAFRO4.630e-1032.33Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A7S0UDZ5_HEMAN1.530e-843.75Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2DJ93_9STRA7.430e-857.50Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007866TRIC channelPFAMPF05197TRICcoord: 1..146
e-value: 8.1E-9
score: 35.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..111
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 53..75
NoneNo IPR availableTMHMMTMhelixcoord: 19..41
NoneNo IPR availableTMHMMTMhelixcoord: 90..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5365contigH-elongata_contig5365:6174..8882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5365.12721.1mRNA_H-elongata_contig5365.12721.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5365 5767..10087 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5365.12721.1 ID=prot_H-elongata_contig5365.12721.1|Name=mRNA_H-elongata_contig5365.12721.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=242bp
MQFGGTFLVGVVLGQTPSWITSFTAWPALALCWWLTFFSPWDSWHGRATR
HKAVVFVAAFGRAVSASHAITSWGADKALTAHFEKARMSAGCTILCGILA
GCGGGILADLLNLEGDSWKLQRTPGALASPSFSVQRCFGASCLYYVLADP
HGYLSPEAAFPLSWLGSWSVAHGGGPSTEAAAMVAVYVTANHLLDYFIPD
YEDPLCVAFKWCLKLLGVTSMVNPARIPGIDANVPNKEKAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007866TRIC_channel