prot_H-elongata_contig53625.12717.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53625.12717.1
Unique Nameprot_H-elongata_contig53625.12717.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length406
Homology
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BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.130e-88
Identity = 175/392 (44.64%), Postives = 205/392 (52.30%), Query Frame = 0 
Query:    1 LIAAAWESAV--FANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGTLPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKSLFVFSVSDNHLYGPVPEDYSQLSVFFAEGNEGLNDTLLPSFASYVNNSAVVVSHENLSCPVITGNIAGGTTMRLRLDPSYIDYIHCVCVKGMEFNSDGGCQPCAAGTYRSYTELFTSPS 390
            L+AA W       ++SY   Q  GLEAL+N+T GEQW  S+GW DA LGVC WYGV C  +G NVTGLAL  NGL GNLS+A +LFD+ SL S+DLS N+LVG VALGFGLMP LE LDLSRN LS FP +WG  ASSL+HL LQ N ISG                                                                                                             IEG LE  + P+SL   +VSDN L GPVPED +QLSVF A+GNEGLNDT LPSFASY N+S VV  H N+SCPVI+G    G  + L LDPSY+ Y HCVC+KGM+ N++ GCQ C  GTYR   +LF + S
Sbjct:   14 LLAAQWIRGAGGVSSSYLETQQVGLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG-------------------------------------------------------------------------------------------------------------IEGELETHSFPRSLSALTVSDNLLTGPVPEDCAQLSVFLADGNEGLNDTSLPSFASYANSSDVVTRHNNMSCPVISGQDTAGRGVHLSLDPSYLGYSHCVCIKGMQGNAEDGCQACPEGTYRGAADLFATRS 296
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.370e-77
Identity = 164/403 (40.69%), Postives = 224/403 (55.58%), Query Frame = 0 
Query:   11 FANSY-HAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGTLPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKSLFVFSVSDN-HLYGPVPEDYSQLSVFFAEGNEGLNDTLLPSFASYVNNSAV------VVSHENLSCPVITGNIAGGTTMRLRLDPSYIDYIHCVCVKGMEFNS-DGGCQPCAAGTYRSYT---ELFTSPSCEACPTNAITL 401
            FA++Y   +Q+ GLEAL+ +TNG+ W  STGW D +LGVC WYGVTC   G NVTG++L +N LVG++S+A  L ++ SL+ +DLS N+L G V L  G+MP +ETLDLS N+LS FP  WG GAS L+HL LQ+N ISG+ P+AW+N+  S S+PLVH++  S WLPELR+L LG N +  T Y+ALQ+V    SLQ LDLS NAL G ++ A  LY+                 +P                  D   + + +  VSDN +  G VP  YS+L + FAE N GL+   LP F      +A          H+   CP    + A      + LD +Y  Y  C C  G++ +  D  C  C  G+YR+     +      C  CP+N+ T+
Sbjct:   29 FASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYW---------------SPPRVV--------------DTDNRRIDLLDVSDNGNFVGEVPASYSELLILFAE-NTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPS-ADENVAAVTLDHAYDGYSVCTCNDGLQGSGGDSECSECPLGSYRNLEKEDDPLAEGVCSPCPSNSTTM 400
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A1V5PX21_9CHLR (Internalin-A n=1 Tax=Chloroflexi bacterium ADurb.Bin360 TaxID=1852861 RepID=A0A1V5PX21_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 6.400e-7
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0 
Query:   18 IQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDL 94
            I+ + LEAL+NSTNG QW+   GW+      C WYGVTC+D   ++T L+L  N L G +  A ++ ++T+LQ LDL
Sbjct: 1273 IEKQALEALYNSTNGSQWLNRNGWM-VDPNACTWYGVTCFDG--HITRLSLVGNQLSGAI--APEIGNLTALQYLDL 1344
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A9RKP6_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RKP6_PHYPA)

HSP 1 Score: 58.9 bits (141), Expect = 8.770e-7
Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 0 
Query:   49 CGWYGVTCYDNGDNV---TGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMP-----------------------------KLETLDLSRNQLS-SFPENWGLGASSLQHLL-LQHNNISGTLPSA 154
            C WYG+ C + G+NV     L+LP+  L G L+K  + F  T +++LDL GN L GS+    G +                              KL++LD S N+LS + P +  L  S+L+H L + HNNI G +PS+
Sbjct:   27 CNWYGIRCGEVGENVGRVISLSLPERKLEGVLTKYIRHF--TYMETLDLGGNNLTGSIPEEIGALKHLKILHLIGLNXXXXXXXXXXXXXXXNCSKLQSLDFSDNKLSGAIPPSLSL-LSNLKHTLNISHNNILGLIPSS 163
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BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A103YIV7_CYNCS (Leucine-rich repeat-containing protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YIV7_CYNCS)

HSP 1 Score: 62.4 bits (150), Expect = 1.090e-6
Identity = 56/174 (32.18%), Postives = 75/174 (43.10%), Query Frame = 0 
Query:   49 CGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLV--------------------------GSVALGFGLMPKLETLDLSRNQLSSFPE---NWGLGASSLQHLLLQHNNISGTLP------SAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSN 187
            C W GV C     +V  L LP   L G +     LF +  LQSL+L+ N L+                          G + L   L+PKL +LDLSRN +   P    N    ++SL+ LL    NIS  LP      S+  +L+ S +H L  + +    LP L  L LGSN
Sbjct:   30 CTWNGVICSQYTGDVIALDLPCAMLRGTIHPNSTLFSLPHLQSLNLAFNNLIDSQLPHEIGMLSNSLTHLNISYCGLTGQIPLEISLLPKLVSLDLSRNLMKLEPHVFYNLLHNSTSLEELLFDQVNISAVLPTYLNISSSMKSLHLSSTHLLGKLCDNIFNLPYLEELDLGSN 203
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BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: L1JBJ6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBJ6_GUITC)

HSP 1 Score: 56.2 bits (134), Expect = 3.860e-6
Identity = 39/88 (44.32%), Postives = 48/88 (54.55%), Query Frame = 0 
Query:   23 LEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNL--SKAEQLFDMTSLQSLDLSGNKLVGSVALGFG 108
            L+ LF  TNG  W  S GW  +A   C ++GVTC   GD+V  L LP N L G +  S A QL     L+ LDLS N+L GS+    G
Sbjct:   18 LQVLFTDTNGANWKRSDGWTTSA-DPCKYFGVTC--RGDSVVALRLPANNLQGRIPSSLATQL---PLLEHLDLSSNRLQGSLPSQIG 99
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A2V7VW12_9BACT (Fibronectin type-III domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7VW12_9BACT)

HSP 1 Score: 60.1 bits (144), Expect = 5.700e-6
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 0 
Query:   17 AIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLS 95
            A Q   L AL+ STNG+ W+    WL A    C WYGV+C D   NV G+ L  N L G L  A  +  +  L++L+LS
Sbjct:   23 AAQRDALVALYQSTNGQNWVAKLNWLGAPGTECTWYGVSCDDGEQNVAGIELTFNNLTGTLPAA--IGSLKGLRTLNLS 99
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A845Z878_9CYAN (LRRNT_2 domain-containing protein n=1 Tax=Okeania sp. SIO3B3 TaxID=2607804 RepID=A0A845Z878_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.040e-5
Identity = 27/59 (45.76%), Postives = 34/59 (57.63%), Query Frame = 0 
Query:   19 QLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNL 77
            + + L AL+N+T+G  WI  T WL      C WYGVTC  NGD+V  L L  N L G +
Sbjct:   67 ECEALVALYNNTDGSNWITKTNWLQTDE-PCDWYGVTCNQNGDSVVQLNLQSNNLSGTI 124
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A7S2UJT6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UJT6_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.210e-5
Identity = 34/116 (29.31%), Postives = 57/116 (49.14%), Query Frame = 0 
Query:   12 ANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLV----GSVALGFGLMPKLETLDLSRNQL 123
            AN   ++Q + L AL+    G++W  +  W  +   VC WYG TC + G  +T + L  N L G++++    + +  LQ ++L GN L       + +       LE +DL+ N L
Sbjct:   36 ANGIESLQRRALHALWKDAGGDRWANADKWTSSDR-VCTWYGTTCTNGGSKITEIDLSFNRLEGSIARL--FWTLPFLQKVNLRGNHLTHHGFNGLTMENASTAPLEWVDLTENSL 148
[Close]
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: UPI001036642A (inactive LRR receptor-like serine/threonine-protein kinase BIR2 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036642A)

HSP 1 Score: 56.2 bits (134), Expect = 2.700e-5
Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = 0 
Query:   48 VCGWYGVTCYDNGDN-VTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALG-FGLMPKLETLDLSRNQLS 124
            +C + G+ C+++ +N   G+ LPD GL G   +   + + TSLQ++DLSGNKLVG++    +  +P + +LDLS N  S
Sbjct:   71 ICDFTGIDCWNDHENRAMGIRLPDRGLKGQFPRG--ISNCTSLQTIDLSGNKLVGTIPYDIWRFLPYVVSLDLSANSFS 147
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FVL7_ECTSI1.130e-8844.64Hypothetical leucine rich repeat and GCG domain-co... [more]
D7FVL6_ECTSI2.370e-7740.69Hypothetical leucine rich repeat and GCG domain-co... [more]
A0A1V5PX21_9CHLR6.400e-745.45Internalin-A n=1 Tax=Chloroflexi bacterium ADurb.B... [more]
A9RKP6_PHYPA8.770e-733.57Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A103YIV7_CYNCS1.090e-632.18Leucine-rich repeat-containing protein n=1 Tax=Cyn... [more]
L1JBJ6_GUITC3.860e-644.32Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A2V7VW12_9BACT5.700e-641.77Fibronectin type-III domain-containing protein n=1... [more]
A0A845Z878_9CYAN1.040e-545.76LRRNT_2 domain-containing protein n=1 Tax=Okeania ... [more]
A0A7S2UJT6_9STRA2.210e-529.31Hypothetical protein (Fragment) n=2 Tax=Attheya se... [more]
UPI001036642A2.700e-539.24inactive LRR receptor-like serine/threonine-protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 113..126
score: 53.32
coord: 203..216
score: 56.15
NoneNo IPR availableGENE3D2.10.50.10coord: 359..405
e-value: 3.4E-5
score: 25.7
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 40..162
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 175..326
NoneNo IPR availablePANTHERPTHR27008:SF104coord: 175..326
NoneNo IPR availablePANTHERPTHR27008:SF104coord: 40..162
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 41..302
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 176..199
e-value: 33.0
score: 9.0
coord: 110..133
e-value: 0.0029
score: 26.8
coord: 86..109
e-value: 31.0
score: 9.2
coord: 203..226
e-value: 34.0
score: 8.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 88..147
e-value: 1.4E-9
score: 37.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 204..219
e-value: 0.26
score: 11.5
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 88..110
score: 5.779
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 205..227
score: 5.332
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 136..157
score: 5.656
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 112..133
score: 8.374
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 248..269
score: 5.417
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 178..199
score: 6.033
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 167..338
e-value: 9.0E-14
score: 52.2
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 23..166
e-value: 2.6E-28
score: 100.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53625contigH-elongata_contig53625:390..2656 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53625.12717.1mRNA_H-elongata_contig53625.12717.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53625 390..2656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53625.12717.1 ID=prot_H-elongata_contig53625.12717.1|Name=mRNA_H-elongata_contig53625.12717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=406bp
LIAAAWESAVFANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCG
WYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLV
GSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGT
LPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSV
IGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLT
TLLLASNAIEGTLEADALPKSLFVFSVSDNHLYGPVPEDYSQLSVFFAEG
NEGLNDTLLPSFASYVNNSAVVVSHENLSCPVITGNIAGGTTMRLRLDPS
YIDYIHCVCVKGMEFNSDGGCQPCAAGTYRSYTELFTSPSCEACPTNAIT
LTTVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf