mRNA_H-elongata_contig53625.12717.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53625.12717.1
Unique NamemRNA_H-elongata_contig53625.12717.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: D7FVL7_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI)

HSP 1 Score: 295 bits (756), Expect = 1.130e-88
Identity = 175/392 (44.64%), Postives = 205/392 (52.30%), Query Frame = 1
Query:    1 LIAAAWESAV--FANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGTLPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKSLFVFSVSDNHLYGPVPEDYSQLSVFFAEGNEGLNDTLLPSFASYVNNSAVVVSHENLSCPVITGNIAGGTTMRLRLDPSYIDYIHCVCVKGMEFNSDGGCQPCAAGTYRSYTELFTSPS 1170
            L+AA W       ++SY   Q  GLEAL+N+T GEQW  S+GW DA LGVC WYGV C  +G NVTGLAL  NGL GNLS+A +LFD+ SL S+DLS N+LVG VALGFGLMP LE LDLSRN LS FP +WG  ASSL+HL LQ N ISG                                                                                                             IEG LE  + P+SL   +VSDN L GPVPED +QLSVF A+GNEGLNDT LPSFASY N+S VV  H N+SCPVI+G    G  + L LDPSY+ Y HCVC+KGM+ N++ GCQ C  GTYR   +LF + S
Sbjct:   14 LLAAQWIRGAGGVSSSYLETQQVGLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISG-------------------------------------------------------------------------------------------------------------IEGELETHSFPRSLSALTVSDNLLTGPVPEDCAQLSVFLADGNEGLNDTSLPSFASYANSSDVVTRHNNMSCPVISGQDTAGRGVHLSLDPSYLGYSHCVCIKGMQGNAEDGCQACPEGTYRGAADLFATRS 296          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: D7FVL6_ECTSI (Hypothetical leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.370e-77
Identity = 164/403 (40.69%), Postives = 224/403 (55.58%), Query Frame = 1
Query:   31 FANSY-HAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGTLPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKSLFVFSVSDN-HLYGPVPEDYSQLSVFFAEGNEGLNDTLLPSFASYVNNSAV------VVSHENLSCPVITGNIAGGTTMRLRLDPSYIDYIHCVCVKGMEFNS-DGGCQPCAAGTYRSYT---ELFTSPSCEACPTNAITL 1203
            FA++Y   +Q+ GLEAL+ +TNG+ W  STGW D +LGVC WYGVTC   G NVTG++L +N LVG++S+A  L ++ SL+ +DLS N+L G V L  G+MP +ETLDLS N+LS FP  WG GAS L+HL LQ+N ISG+ P+AW+N+  S S+PLVH++  S WLPELR+L LG N +  T Y+ALQ+V    SLQ LDLS NAL G ++ A  LY+                 +P                  D   + + +  VSDN +  G VP  YS+L + FAE N GL+   LP F      +A          H+   CP    + A      + LD +Y  Y  C C  G++ +  D  C  C  G+YR+     +      C  CP+N+ T+
Sbjct:   29 FASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYW---------------SPPRVV--------------DTDNRRIDLLDVSDNGNFVGEVPASYSELLILFAE-NTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPS-ADENVAAVTLDHAYDGYSVCTCNDGLQGSGGDSECSECPLGSYRNLEKEDDPLAEGVCSPCPSNSTTM 400          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A5B6YKG9_DAVIN (LRRNT_2 domain-containing protein n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6YKG9_DAVIN)

HSP 1 Score: 70.5 bits (171), Expect = 1.510e-9
Identity = 44/106 (41.51%), Postives = 57/106 (53.77%), Query Frame = 1
Query:  142 VCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENW-GLGASSLQHLLLQHNNISGTLP 456
            VC W GVTC  N   VT L L D GL G +  A  L +++ L SLD+  N   GSV      + +L+ + L  N  S    +W GL    LQHL LQ+NN +GT+P
Sbjct:   60 VCNWIGVTCGVNHQRVTALNLSDMGLRGTI--APHLGNLSFLTSLDIYNNNFHGSVPRELARLHRLKGMYLGYNSSSGEVPSWFGLMLPKLQHLFLQYNNFTGTIP 163          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A4D6LZC8_VIGUN (LRR receptor-like serine/threonine-protein kinase FLS2 n=1 Tax=Vigna unguiculata TaxID=3917 RepID=A0A4D6LZC8_VIGUN)

HSP 1 Score: 69.3 bits (168), Expect = 6.380e-9
Identity = 73/231 (31.60%), Postives = 107/231 (46.32%), Query Frame = 1
Query:  196 LALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSS-----FPENWGLGASSLQHLLLQHNNISGTLP-----SAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKSLFVFSVSDNHLYGPV 858
            L L +N LVG L +  +L     L+ L LS N L G +   FG    L +LD++ N LS           G    +L+HL LQ N I+GT+P     SA ++L+ S +H    + E S     L TLS+ SN +   +    +S     +L++L++  N L  E +    ++H     LS C          SL  L L  N I GTL   ++  SL V S+ +N L G +
Sbjct:  335 LHLSNNRLVGMLKEGNKL--PFRLEFLSLSSNLLEGGIPKSFGSACALRSLDITDNNLSDELSTIIHHLSGCAKYTLEHLSLQGNQINGTIPDLSAFSALMSLDLSNNHLNGKIREDSNLPFHLETLSISSNFLEGGIP---RSFGNACALRSLEMGDNRLSVEFSMI--IHH-----LSGC-------ARYSLKELYLRMNEINGTLIDLSIFTSLRVLSIGENKLSGKI 546          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A0L0D714_THETB (Leucine Rich Repeat family protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D714_THETB)

HSP 1 Score: 64.3 bits (155), Expect = 2.570e-7
Identity = 54/159 (33.96%), Postives = 77/159 (48.43%), Query Frame = 1
Query:   25 AVFANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGD----NVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFG-LMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQ---HNNISGTLPSAWINLN 477
            A  A S  A +L  L AL+ +TNG  W  S GW D     C   GVTC  N      +V  + L  N L G L  +   +D+  L+ LDLS N + G+V + +G  +  LE L+L   +L S   + GLG +      ++    N ++GTLP  W  L+
Sbjct:   19 AAAAVSVPAAELAALNALYEATNGPTWADSRGWNDGD--ACAAVGVTCSTNVTAGTAHVVAIELSGNKLSGTLPASG--WDLPELRILDLSDNLIGGTVPVSWGESLQALEELNLGGERLLSLAAHEGLGPNYRYFTSIKVYSSNPLTGTLPPEWGKLS 173          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A1V5PX21_9CHLR (Internalin-A n=1 Tax=Chloroflexi bacterium ADurb.Bin360 TaxID=1852861 RepID=A0A1V5PX21_9CHLR)

HSP 1 Score: 63.2 bits (152), Expect = 6.400e-7
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1
Query:   52 IQLKGLEALFNSTNGEQWIWSTGWLDAALGVCGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDL 282
            I+ + LEAL+NSTNG QW+   GW+      C WYGVTC+D   ++T L+L  N L G +  A ++ ++T+LQ LDL
Sbjct: 1273 IEKQALEALYNSTNGSQWLNRNGWM-VDPNACTWYGVTCFDG--HITRLSLVGNQLSGAI--APEIGNLTALQYLDL 1344          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A8K0HEQ1_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HEQ1_9ROSA)

HSP 1 Score: 62.4 bits (150), Expect = 8.580e-7
Identity = 73/235 (31.06%), Postives = 104/235 (44.26%), Query Frame = 1
Query:  265 LQSLDLSGNKLVGSVALGF-GLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGTLPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAP-----SLTTLLLASNAIEGTLEADALPKSLFVF-SVSDNHLYGPVPEDYSQL---SVFFAEGNEGLN-DTLLPSF 936
            ++ L LS  KL GS+A GF   M  L+TLDLS N+L      W     SL  + L  N   G++ S   + N S S               ++ L+L SN+ T    L+     G P L+ LDLS N L    +    L   E  ++S+C  ++  S  P     SL  L +++N + GT  AD  P     F ++S N+  G +  D  Q    S F+  GN   N  +  PSF
Sbjct:   59 IRELKLSSKKLNGSIAWGFLRNMSNLQTLDLSGNRLRGQLPGWLWSIPSLVEVNLSMNRFGGSVGSEPTSRNGSFS--------------SIQVLNLSSNRFTNLARLS-----GFPKLRVLDLSRNDLRTLPSGFKSLTKLENLNISSC--SISGSLKPISALRSLKYLDVSNNKLNGTFPADFPPLGGLQFLNISLNNFTGLISLDKYQRFGKSAFYNAGNFSFNMASKTPSF 272          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A9RKP6_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RKP6_PHYPA)

HSP 1 Score: 58.9 bits (141), Expect = 8.770e-7
Identity = 47/140 (33.57%), Postives = 69/140 (49.29%), Query Frame = 1
Query:  145 CGWYGVTCYDNGDNV---TGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMP-----------------------------KLETLDLSRNQLS-SFPENWGLGASSLQHLL-LQHNNISGTLPSA 462
            C WYG+ C + G+NV     L+LP+  L G L+K  + F  T +++LDL GN L GS+    G +                              KL++LD S N+LS + P +  L  S+L+H L + HNNI G +PS+
Sbjct:   27 CNWYGIRCGEVGENVGRVISLSLPERKLEGVLTKYIRHF--TYMETLDLGGNNLTGSIPEEIGALKHLKILHLIGLNXXXXXXXXXXXXXXXNCSKLQSLDFSDNKLSGAIPPSLSL-LSNLKHTLNISHNNILGLIPSS 163          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A103YIV7_CYNCS (Leucine-rich repeat-containing protein n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103YIV7_CYNCS)

HSP 1 Score: 62.4 bits (150), Expect = 1.090e-6
Identity = 56/174 (32.18%), Postives = 75/174 (43.10%), Query Frame = 1
Query:  145 CGWYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLV--------------------------GSVALGFGLMPKLETLDLSRNQLSSFPE---NWGLGASSLQHLLLQHNNISGTLP------SAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSN 561
            C W GV C     +V  L LP   L G +     LF +  LQSL+L+ N L+                          G + L   L+PKL +LDLSRN +   P    N    ++SL+ LL    NIS  LP      S+  +L+ S +H L  + +    LP L  L LGSN
Sbjct:   30 CTWNGVICSQYTGDVIALDLPCAMLRGTIHPNSTLFSLPHLQSLNLAFNNLIDSQLPHEIGMLSNSLTHLNISYCGLTGQIPLEISLLPKLVSLDLSRNLMKLEPHVFYNLLHNSTSLEELLFDQVNISAVLPTYLNISSSMKSLHLSSTHLLGKLCDNIFNLPYLEELDLGSN 203          
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Match: A0A5J5AXN9_9ASTE (LRRNT_2 domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5AXN9_9ASTE)

HSP 1 Score: 62.0 bits (149), Expect = 1.240e-6
Identity = 64/219 (29.22%), Postives = 91/219 (41.55%), Query Frame = 1
Query:  226 NLSKAEQLFDMTSLQSLDLSGNKLVGSVALGFGLMPKLETLDLSRNQLSSFPENWG--LGASSLQHLLLQHNNISGTLP-SAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSVIGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLTTLLLASNAIEGTLEADALPKS----LFVFSVSDNHLYGPVP 861
            N S  ++L  M +L+ L+LS N + G +      +  L  LDLS N+L+   E     L    LQ+L L  N+ +   P  A INL                     + L    N++    +   Q +  L +L+ LDLSGN + GE++                     N   PSLTTL +  N + GTL AD    S    +  F VS NH+ G VP
Sbjct:  169 NSSHFQELTIMNNLEVLNLSSNGIAGEIPSSIWTLTSLSVLDLSWNELNGTTEGLQGILNLKKLQYLNLSANSFTELPPLGALINL---------------------KYLEFSFNRLENLNHF--QELTNLSNLEVLDLSGNDITGEISP-------------------FNWTLPSLTTLSIGWNQLNGTLPADMRLNSENLNMTWFDVSMNHIQGEVP 345          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53625.12717.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL7_ECTSI1.130e-8844.64Hypothetical leucine rich repeat and GCG domain-co... [more]
D7FVL6_ECTSI2.370e-7740.69Hypothetical leucine rich repeat and GCG domain-co... [more]
A0A5B6YKG9_DAVIN1.510e-941.51LRRNT_2 domain-containing protein n=1 Tax=Davidia ... [more]
A0A4D6LZC8_VIGUN6.380e-931.60LRR receptor-like serine/threonine-protein kinase ... [more]
A0A0L0D714_THETB2.570e-733.96Leucine Rich Repeat family protein n=1 Tax=Thecamo... [more]
A0A1V5PX21_9CHLR6.400e-745.45Internalin-A n=1 Tax=Chloroflexi bacterium ADurb.B... [more]
A0A8K0HEQ1_9ROSA8.580e-731.06Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A9RKP6_PHYPA8.770e-733.57Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A103YIV7_CYNCS1.090e-632.18Leucine-rich repeat-containing protein n=1 Tax=Cyn... [more]
A0A5J5AXN9_9ASTE1.240e-629.22LRRNT_2 domain-containing protein n=1 Tax=Nyssa si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53625contigH-elongata_contig53625:390..2656 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score298.5
Seed ortholog evalue4.7e-78
Seed eggNOG ortholog2880.D7FVL7
KEGG koko:K17307
EggNOG free text desc.calcium ion binding
EggNOG OGsKOG1217@1,KOG1217@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size1218
Cds size1218
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53625.12717.1prot_H-elongata_contig53625.12717.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53625 390..2656 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930874.3600924-CDS-H-elongata_contig53625:389..5151622930874.3600924-CDS-H-elongata_contig53625:389..515Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 390..515 -
1691679606.8093724-CDS-H-elongata_contig53625:389..5151691679606.8093724-CDS-H-elongata_contig53625:389..515Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 390..515 -
1622930874.3787677-CDS-H-elongata_contig53625:794..9911622930874.3787677-CDS-H-elongata_contig53625:794..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 795..991 -
1691679606.8219025-CDS-H-elongata_contig53625:794..9911691679606.8219025-CDS-H-elongata_contig53625:794..991Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 795..991 -
1622930874.3950295-CDS-H-elongata_contig53625:1502..19511622930874.3950295-CDS-H-elongata_contig53625:1502..1951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 1503..1951 -
1691679606.8324215-CDS-H-elongata_contig53625:1502..19511691679606.8324215-CDS-H-elongata_contig53625:1502..1951Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 1503..1951 -
1622930874.4089584-CDS-H-elongata_contig53625:2210..26561622930874.4089584-CDS-H-elongata_contig53625:2210..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 2211..2656 -
1691679606.8495705-CDS-H-elongata_contig53625:2210..26561691679606.8495705-CDS-H-elongata_contig53625:2210..2656Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53625 2211..2656 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53625.12717.1

>prot_H-elongata_contig53625.12717.1 ID=prot_H-elongata_contig53625.12717.1|Name=mRNA_H-elongata_contig53625.12717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=406bp
LIAAAWESAVFANSYHAIQLKGLEALFNSTNGEQWIWSTGWLDAALGVCG
WYGVTCYDNGDNVTGLALPDNGLVGNLSKAEQLFDMTSLQSLDLSGNKLV
GSVALGFGLMPKLETLDLSRNQLSSFPENWGLGASSLQHLLLQHNNISGT
LPSAWINLNTSKSHPLVHVEEFSRWLPELRTLSLGSNQITMTVYLALQSV
IGLPSLQALDLSGNALGGELNAAFDLYHCEGGSLSNCDSTLHNSRAPSLT
TLLLASNAIEGTLEADALPKSLFVFSVSDNHLYGPVPEDYSQLSVFFAEG
NEGLNDTLLPSFASYVNNSAVVVSHENLSCPVITGNIAGGTTMRLRLDPS
YIDYIHCVCVKGMEFNSDGGCQPCAAGTYRSYTELFTSPSCEACPTNAIT
LTTVS*
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mRNA from alignment at H-elongata_contig53625:390..2656-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53625.12717.1 ID=mRNA_H-elongata_contig53625.12717.1|Name=mRNA_H-elongata_contig53625.12717.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2267bp|location=Sequence derived from alignment at H-elongata_contig53625:390..2656- (Himanthalia elongata Himel1 dioecious)
CTAATAGCCGCAGCGTGGGAAAGTGCTGTGTTCGCAAATTCGTACCACGC GATACAGCTCAAGGGACTCGAAGCTCTTTTTAACTCGACAAACGGTGAGC AATGGATCTGGTCCACTGGGTGGCTTGACGCTGCGCTCGGAGTGTGTGGG TGGTACGGAGTGACGTGTTATGATAATGGTGATAACGTGACTGGTCTAGC GCTCCCTGACAATGGCCTCGTCGGGAATCTTTCCAAAGCGGAGCAATTAT TCGATATGACATCTCTACAGAGCTTGGACCTATCAGGCAACAAACTCGTG GGCTCTGTCGCCCTAGGCTTCGGGCTAATGCCGAAACTGGAGACGCTTGA TCTTTCTCGCAATCAACTCTCATCATTCCCCGAAAATTGGGGTTTAGGAG CGTCTTCGCTACAGCATCTTTTGCTACAGCACAATAACATATCTGGGTGA GCTACGATAATTTGCCTCACTACAACATACCGGTATAATATATGGACATC ATTAGGTGTCGACAGCTTGACGTTCTTCCCTCGACTTGCTAGCAACATAG ATATTCGAGGTCCTAGATATGGAAACACGTTGATGAATCGTCGCTTCCAA CATATGTGCGCAGTTAGATCACCTTCTATACTTCCTACTGCTGATGATGT GTAAGCTCTTTTTCTGTTACTTTCATTTGCCTGCAACCTGTGCCGAGAAA CCCAGAACGCTCCCATCCGCGTGGATCAACCTCAACACCAGCAAGTCTCA CCCGCTTGTACACGTTGAAGAATTTTCTAGGTGGCTGCCCGAGCTTCGTA CCCTATCTCTTGGCAGCAACCAGATCACAATGACGGTATATCTTGCTTTA CAATCGGTAATCGGGTTGCCGTCCCTGCAAGCACTTGATCTCAGTGGCAA TGCCCTGGGTGGAGAGCTGAATGCTGCATTTGACCTGTATCATTGCGAGG GAGGCAGCTTGAGCAACTGTGATTCCACGCTGCACAACTCTCGCGCTCCA TCCTTAACCACACTTTTACTGGCGTCAAACGCAATTGAGGGTACATTAGA GGCGGATGCGCTGCCAAAGTCTTTGTTCGTTTTTTCGGTATCGGATAACC ATCTATATGGACCTGTTCCAGAGGACTATTCCCAGCTTTCGGTATTTTTT GCCGGTGAGAACTCTAATAATGTATTTCGTACCTTTCTTTTTTAAAGCCA GAGTTGATTACACGATACGTGTACTCCTTCGTTTGGGCTGCAAATCGACC GTAGCTTCTGAATCCTCCTTCTCTTGGAAGGCTTTCGTTGTTGCGTTTCT TCGCGTGTAAATAGTATCACGAAATGGAGTTCAATTTTTACTTTTCCGGG TCCGTTTACAGTATCAATTAATCGATGACAACTGTGAGATTAATGAGGTC GTTCTTTCTTTCTATCCTTAGTGATTGTTTTTTTTTCTCGGCTTATACGT TTTTGTTTGCCCGAATCTCCATATGGTCGTGATGGGATGCTTTATCGAAT TACTTGTACACAATTATATCGTCGAACTAATAATCTACAAATAGGGCCAT CCACGGCTTCCCTATCCCATCCCTGAGCATCGAGCAAACCCGGTACGAAG CATTCGATTAATGTGTTCATAGATCACTTTGGCCCCCTTCACGGATGTAA CGCCTCCCTTCACAGAAGGAAATGAAGGCCTCAACGACACATTGCTGCCC AGTTTTGCATCCTACGTCAACAACTCTGCCGTTGTAGTTAGTCACGAAAA CCTGTCGTGTCCCGTGATAACTGGCAACATCGCGGGGGGTACGACCATGC GCCTAAGGCTCGATCCTTCGTACATTGACTATATACATTGTGTGTGCGTT AAAGGCATGGAGGTGAGGTATTGGGTACACAAGAACGTTTTTTCCCCCCG TGTTTGCAATATGAAGCCTTCCCTGTCGAAGTTCAAAGTATAGATACTGT GAACTTTGTAAAATTCATTATTTATTAAGCACGATTGAGCTGCCTAAGAT TCGTGGGAGAAGAAAACTGACTACCAGTAGAGCATACCCAGCAGATCAAA GTTCATCCCCTCTATCCTACATACAGTAGCTCAATGCACTATATACCAGA ACTAAGACCTACATTTTGGACATTTTTTTTTGCTTTGACAGTTCAACTCG GACGGTGGGTGTCAACCGTGCGCGGCGGGGACCTACAGGAGCTACACTGA GCTGTTTACATCTCCTTCTTGCGAGGCCTGCCCGACCAATGCAATAACAC TGACTACTGTGAGTTGA
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Coding sequence (CDS) from alignment at H-elongata_contig53625:390..2656-

>mRNA_H-elongata_contig53625.12717.1 ID=mRNA_H-elongata_contig53625.12717.1|Name=mRNA_H-elongata_contig53625.12717.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2436bp|location=Sequence derived from alignment at H-elongata_contig53625:390..2656- (Himanthalia elongata Himel1 dioecious)
CTAATAGCCGCAGCGTGGGAAAGTGCTGTGTTCGCAAATTCGTACCACGC
GATACAGCTCAAGGGACTCGAAGCTCTTTTTAACTCGACAAACGGTGAGC
AATGGATCTGGTCCACTGGGTGGCTTGACGCTGCGCTCGGAGTGTGTGGG
TGGTACGGAGTGACGTGTTATGATAATGGTGATAACGTGACTGGTCTAGC
GCTCCCTGACAATGGCCTCGTCGGGAATCTTTCCAAAGCGGAGCAATTAT
TCGATATGACATCTCTACAGAGCTTGGACCTATCAGGCAACAAACTCGTG
GGCTCTGTCGCCCTAGGCTTCGGGCTAATGCCGAAACTGGAGACGCTTGA
TCTTTCTCGCAATCAACTCTCATCATTCCCCGAAAATTGGGGTTTAGGAG
CGTCTTCGCTACAGCATCTTTTGCTACAGCACAATAACATATCTGGCTAA
TAGCCGCAGCGTGGGAAAGTGCTGTGTTCGCAAATTCGTACCACGCGATA
CAGCTCAAGGGACTCGAAGCTCTTTTTAACTCGACAAACGGTGAGCAATG
GATCTGGTCCACTGGGTGGCTTGACGCTGCGCTCGGAGTGTGTGGGTGGT
ACGGAGTGACGTGTTATGATAATGGTGATAACGTGACTGGTCTAGCGCTC
CCTGACAATGGCCTCGTCGGGAATCTTTCCAAAGCGGAGCAATTATTCGA
TATGACATCTCTACAGAGCTTGGACCTATCAGGCAACAAACTCGTGGGCT
CTGTCGCCCTAGGCTTCGGGCTAATGCCGAAACTGGAGACGCTTGATCTT
TCTCGCAATCAACTCTCATCATTCCCCGAAAATTGGGGTTTAGGAGCGTC
TTCGCTACAGCATCTTTTGCTACAGCACAATAACATATCTGGAACGCTCC
CATCCGCGTGGATCAACCTCAACACCAGCAAGTCTCACCCGCTTGTACAC
GTTGAAGAATTTTCTAGGTGGCTGCCCGAGCTTCGTACCCTATCTCTTGG
CAGCAACCAGATCACAATGACGGTATATCTTGCTTTACAATCGGTAATCG
GGTTGCCGTCCCTGCAAGCACTTGATCTCAGTGGCAATGCCCTGGGTGGA
GAGCTGAATGCTGCATTTGACCTGTATCATTGCGAGGGAGGCAGCTTGAG
CAACTGTGATTCCACGCTGCACAACTCTCGCGCTCCATCCTTAACCACAC
TTTTACTGGCGTCAAACGCAATTGAGGGTACATTAGAGGCGGATGCGCTG
CCAAAGTCTTTGTTCGTTTTTTCGGTATCGGATAACCATCTATATGGACC
TGTTCCAGAGGACTATTCCCAGCTTTCGGTATTTTTTGCCGAACGCTCCC
ATCCGCGTGGATCAACCTCAACACCAGCAAGTCTCACCCGCTTGTACACG
TTGAAGAATTTTCTAGGTGGCTGCCCGAGCTTCGTACCCTATCTCTTGGC
AGCAACCAGATCACAATGACGGTATATCTTGCTTTACAATCGGTAATCGG
GTTGCCGTCCCTGCAAGCACTTGATCTCAGTGGCAATGCCCTGGGTGGAG
AGCTGAATGCTGCATTTGACCTGTATCATTGCGAGGGAGGCAGCTTGAGC
AACTGTGATTCCACGCTGCACAACTCTCGCGCTCCATCCTTAACCACACT
TTTACTGGCGTCAAACGCAATTGAGGGTACATTAGAGGCGGATGCGCTGC
CAAAGTCTTTGTTCGTTTTTTCGGTATCGGATAACCATCTATATGGACCT
GTTCCAGAGGACTATTCCCAGCTTTCGGTATTTTTTGCCGAAGGAAATGA
AGGCCTCAACGACACATTGCTGCCCAGTTTTGCATCCTACGTCAACAACT
CTGCCGTTGTAGTTAGTCACGAAAACCTGTCGTGTCCCGTGATAACTGGC
AACATCGCGGGGGGTACGACCATGCGCCTAAGGCTCGATCCTTCGTACAT
TGACTATATACATTGTGTGTGCGTTAAAGGCATGGAGAAGGAAATGAAGG
CCTCAACGACACATTGCTGCCCAGTTTTGCATCCTACGTCAACAACTCTG
CCGTTGTAGTTAGTCACGAAAACCTGTCGTGTCCCGTGATAACTGGCAAC
ATCGCGGGGGGTACGACCATGCGCCTAAGGCTCGATCCTTCGTACATTGA
CTATATACATTGTGTGTGCGTTAAAGGCATGGAGTTCAACTCGGACGGTG
GGTGTCAACCGTGCGCGGCGGGGACCTACAGGAGCTACACTGAGCTGTTT
ACATCTCCTTCTTGCGAGGCCTGCCCGACCAATGCAATAACACTGACTAC
TGTGAGTTGATTCAACTCGGACGGTGGGTGTCAACCGTGCGCGGCGGGGA
CCTACAGGAGCTACACTGAGCTGTTTACATCTCCTTCTTGCGAGGCCTGC
CCGACCAATGCAATAACACTGACTACTGTGAGTTGA
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