mRNA_H-elongata_contig53548.12711.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig53548.12711.1
Unique NamemRNA_H-elongata_contig53548.12711.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: D7G7V2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V2_ECTSI)

HSP 1 Score: 464 bits (1194), Expect = 2.550e-155
Identity = 271/504 (53.77%), Postives = 317/504 (62.90%), Query Frame = 1
Query:    1 QRRRQQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRG-----NPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGE----------RETRGQGRTPS---DVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIH---------GKPCGPCGQSAERDAAGDAARELYLREVMLCPDQHAEEIRHQLDDGVLRVFSMPAAVIEKVLRIQRGTPGVPITPERLTSPDMPRKGSEGWNECVVKHDRESDERMTECATSSVTEATAKSNGF----------------PGRSSKGNTAEI-GSMATEFDNSWILAACAREFL 1380
            QR+RQQ  CRLW ELG FSA+EVPARQSLNAEDAL +A  MGL+WLLHLDIDELFFT EPS++PHFDRL+ LGVEQMTYANHEAVP RE V DYFREV  F+VN L+LPLS  V ERTRFWRRRT HGQYMLAYDNGK+AV+VLP R+VPQSVHRW TL   G RG     N    +   D +   +   + E  G    EG  ++S         + CG+                  +PS      D LVNR AM DPR LRFDEVLECNDPCVLHYP CGLDWLRDKYRLLG FPSSWF G+LPIAPCFHLDAR+A+H         G+  G C  SAERD      R LY +EVMLCP +H+EE++ QL+ GVLR+   PA+V+E+   + RG PG  ITP  L S   P++G++            + E       SSV E  A+ N                  P  +S G+TA   G  A+  DN+WILAACAREFL
Sbjct:  164 QRKRQQDRCRLWGELGSFSATEVPARQSLNAEDALQRASTMGLDWLLHLDIDELFFTSEPSVRPHFDRLNELGVEQMTYANHEAVPLREEVTDYFREVSTFKVNHLLLPLSHEVAERTRFWRRRTNHGQYMLAYDNGKSAVRVLPDRVVPQSVHRWRTL-KPGERGARCSSNAAGEEETDDKSFLPVDGHKLEDPGEGTGEGVAAASTTGSAGD--ETCGDWLQTQXXXXXXXXXXXXXSPSLSGSGPDHLVNRVAMADPRELRFDEVLECNDPCVLHYPSCGLDWLRDKYRLLGSFPSSWFDGKLPIAPCFHLDARNAVHQGHGTRGSLGEGGGVC-DSAERDGG----RALYRKEVMLCPKEHSEEMQAQLEHGVLRILGEPASVVEQARHV-RGPPGSEITPATLLS--TPQEGTQTGKVTETGGSSPATEG------SSVAEGAAEGNPSXXXXXXXXALLEGVQPPVAASVGHTASAEGVDASGVDNAWILAACAREFL 650          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A7S2SWB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SWB6_9STRA)

HSP 1 Score: 234 bits (598), Expect = 1.140e-68
Identity = 140/350 (40.00%), Postives = 171/350 (48.86%), Query Frame = 1
Query:   13 QQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPS-IKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGDAARELYLREVMLCP---DQHAEEIRHQLDDGV 1050
            Q+ NC  W+ L  F   EV ARQSLNAE A   A DMG+ WLLH+D DELF+  E   ++ HF  L   G++Q+TY NHEAVP RE+V D+F+EV LFR +   +PL        RFW RRT HGQYML YDNGK+A +V     V QSVH W                       TD R                                                     TA+ DPR +    + + N PC+LHY  CGL WLRDKY +LG FP +WFGG+LPIAP FHLDARDA+                 GD  R LY  +VML P   D+ A E+  Q++ GV
Sbjct:  102 QRDNCASWETLEGFVQDEVQARQSLNAETAAHLARDMGIAWLLHMDSDELFYCGEGGKVEDHFRDLDREGIDQLTYLNHEAVPEREDVGDFFQEVTLFRRHHFTVPLRPQAQACMRFWERRTNHGQYMLVYDNGKSAARVHAIAGV-QSVHHWRLA--------------------TDARSC---------------------------------------------------TALADPRKMDLANLRKTNYPCILHYVTCGLSWLRDKYGILGEFPDAWFGGKLPIAPSFHLDARDALA--------------QGGDVLRALYSSQVMLGPQEEDEPAAELDRQINSGV 365          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A7S4ECQ6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECQ6_9STRA)

HSP 1 Score: 198 bits (504), Expect = 3.210e-55
Identity = 135/358 (37.71%), Postives = 167/358 (46.65%), Query Frame = 1
Query:   13 QQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTV-EPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGDAARELYLREVMLCPDQHAEEIRHQLDDGVLRVFSMPAAVI 1083
            QQ  C  W   GP+ A+EV ARQ+LNAE A  +A   G  WLLHLD+DELFF   + ++  HF  L +  +   TYANHE V  R +V+DYFREV LFR N   LPL+S V    R+WR R+ HGQY+L YD GK+AVK++   I P SVH W T +                     L  L                            C  R          D+ +R  N   M                P +LHY  CG  WLR KY +LG F  SWFGG LPIAP FHLDARD +             RDA    A E +    +  PD  A+E+  QL  GVLR    P+ ++
Sbjct:  115 QQEKCACWARFGPY-ATEVQARQALNAEHASLQARRDGCTWLLHLDVDELFFVKSKEALLTHFRDLDAKDIGHCTYANHEGVAERSDVRDYFREVTLFRWNHHSLPLTSGVQAGMRWWRSRSKHGQYLLCYDCGKSAVKLVDD-IEPVSVHAWRTPLKK-------------------LTAL----------------------------CDAR---------LDLSERSSNPEKM----------------PVILHYVNCGTFWLRTKYEILGAFADSWFGGSLPIAPSFHLDARDVV-----------GTRDAE---ALEAFYGRHLAPPD--ADELARQLAAGVLRRLDAPSKLL 382          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A0G4G3M5_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4G3M5_VITBC)

HSP 1 Score: 196 bits (497), Expect = 4.410e-54
Identity = 116/297 (39.06%), Postives = 147/297 (49.49%), Query Frame = 1
Query:   25 CRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSG---PRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAI 906
            C L+  L     +EV ARQ LNA  A   A   G++WLLH+D DELF+T EPS+KPHF  L+  G  QMTYANHE VP   + +DYF  V LFR +   +P +        +W  R   GQY   YDNGK+A +V+P  +  + VHRW    ++G   PR            T  DLR L        AA G  +++                  G+GR    V D                      + PC+LH+ VCGL WL DKY+ LGGF  SW GG+LPIAP FHLD RD +
Sbjct:   75 CDLFSRLKDIHHTEVVARQMLNASYAAVVASADGMDWLLHIDSDELFYTEEPSVKPHFQALTGNGYHQMTYANHEGVPTSIDCQDYFAAVSLFRTHPSHVPFTHEARRAMHWWVERLGRGQYFAFYDNGKSAARVVPG-LRARDVHRWALPPSTGGSSPRWGS---------TFADLRAL--------AAGGGPAATE----------------NGEGRGGRPVYDSSFR------------------DGPCILHFAVCGLSWLMDKYQRLGGFHDSWLGGKLPIAPSFHLDCRDVV 319          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A6G0X5T9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X5T9_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.840e-49
Identity = 133/390 (34.10%), Postives = 170/390 (43.59%), Query Frame = 1
Query:   13 QQTNCRLWKELGPFSASEVPARQSLNAEDAL-----WKADDMG--LNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVL-ECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGD--AARELYLREVMLCPDQHAEEIRHQLDDGVLRVFSMPAAVIEKVLRIQRGTPGV----PITPER 1140
            Q  +C+L+  L P   +EV ARQ LN E A+     W  D     L WL+HLD+DEL +    S++  F  L++  V+Q T+ NHEAVP    + +YF E   F+VN LV P +         W+ RTT+ QYMLAYDNGK+AV++    I P SVH+W  + T                                                                           T   DPR L   +V+   + P VLHYP CG +W + KY LLG FP +WFGG+LPI PCFH  AR           G  A   AA D  A R LY  +VML  D  AE   H +  GV    + PA  I  +  IQ  TP      P+ PER
Sbjct:   78 QHPSCQLYSSLMPCLPNEVQARQQLNCELAMNACLNWNDDHPSERLEWLVHLDLDELLY-FRNSLREFFASLNAASVDQFTFVNHEAVPTSCEISNYFVEATHFKVNHLVAPFTPAALASMNRWKTRTTYRQYMLAYDNGKSAVRIR-RGITPASVHQWRNVSTW--------------------------------------------------------------------------TNFADPRHLALGQVMPHSSSPWVLHYPNCGYEWFKAKYTLLGPFPDAWFGGKLPIEPCFHTTAR-----------GTWAACVAANDESAMRRLYETQVML--DDEAEMADH-MQHGVCIQLTQPAERIASL--IQSSTPREQRDDPLRPER 375          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A812V5V9_SYMPI (Oxidized purine nucleoside triphosphate hydrolase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812V5V9_SYMPI)

HSP 1 Score: 190 bits (483), Expect = 4.860e-49
Identity = 112/333 (33.63%), Postives = 151/333 (45.35%), Query Frame = 1
Query:   13 QQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGDAARELYLREVMLCPDQ 1011
            Q+ NC  + +L  F   EV ARQ L+ E A   A  +G  W+L LD DELF+T E SI PHF+ L   G++QM+Y NHEAVP +    DYF  V LF+ +Q  +PL++      RFW  R+ HGQY L YDNGK+A +      +P++ H W   I S                                                 + C                      TA+ DPR +  +   EC  PC+LH+PVCG++WL+ KYR LG FP  W G  +P+   FH DAR+              E  + GDA + L+  +VML   Q
Sbjct:  257 QRENCASFNKLASFVDKEVSARQLLDFEFASTLAPSLGCRWILCLDSDELFYTDEDSIVPHFEALELNGIDQMSYLNHEAVPEKPETPDYFATVSLFKQHQFSVPLTAKARSGLRFWMERSRHGQYFLFYDNGKSACRTGLGVTIPKNQHLWQLPIGS-------------------------------------------------KSC----------------------TALADPRRMDVEGFRECKYPCILHFPVCGIEWLKAKYRTLGNFPDKWLGN-MPLNESFHKDARE--------------EHKSGGDALQTLFTEQVMLDSSQ 503          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A835YS67_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS67_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.520e-47
Identity = 118/297 (39.73%), Postives = 146/297 (49.16%), Query Frame = 1
Query:   31 LWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDY---FREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECND--PCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAI 906
            LW       ++EV ARQ+LNAE AL  A   GL+WLLH+DIDELF+T + SI+ HF  L    V QMTY NHE VP    ++DY   F  V LF+ + + LPLS        +WRRRT HGQYML YD GK+ V+V     +P++VH W       P   P D                             SSS                    G  P        +RTA+ DPR +     L   +  PC+LHY  CG  W RDKY LL  F  +WFGG+LPIAP FHLD+RD +
Sbjct:   15 LWPPPRSERSTEVQARQTLNAELALQLAARAGLHWLLHIDIDELFWTPDDSIQSHFAMLRRCDVYQMTYTNHEGVP-EAPLRDYADCFTAVTLFKRHFMSLPLSGDARGAMDWWRRRTYHGQYMLGYDCGKSVVRV-GCGALPRNVHAWRL-----PPPLPSD-----------------------------SSS--------------------GSAPR-------SRTALADPRNMDMGAYLPLPEHCPCILHYINCGWGWYRDKYALLARFGDAWFGGKLPIAPSFHLDSRDVL 248          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A1Q9C9W9_SYMMI (Oxidized purine nucleoside triphosphate hydrolase n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9C9W9_SYMMI)

HSP 1 Score: 181 bits (460), Expect = 1.850e-47
Identity = 118/359 (32.87%), Postives = 160/359 (44.57%), Query Frame = 1
Query:   13 QQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGDAARELYLREVMLCPDQHAEEIRH----QLDDGVLRVFSMPAA 1077
            Q+ +C  +K+L  F   EV ARQ ++ E A   A  +   W+L LD DELF+T E SI PHF  L S  + QM+Y NHE VP +   +DYF  V LF+ +Q  +PL++      RFW  R+ HGQY L YDNGK+A +       P S H W       P G+                                            + C                      TA+ DPR +  +   EC DPC+LH+PVCG+ WL  KY+ LG FP  W G  +P+   FH DAR+A                + GDA   L+  +VML  +Q A +I      +L + V  + S+PAA
Sbjct:  257 QRQHCASFKKLAGFIDKEVSARQLIDFEFASTLAPSLACRWILCLDSDELFYTSEDSIVPHFQMLESQDIHQMSYLNHEGVPEQPETQDYFATVSLFKQHQFAVPLTAKARSGLRFWMDRSKHGQYFLFYDNGKSACRT-GFGATPSSQHLWQL-----PAGH--------------------------------------------KSC----------------------TALADPRRMDVEGFRECRDPCILHFPVCGVAWLYAKYKTLGAFPDKWLGN-MPLDESFHKDAREA--------------HLSHGDALSALFTEQVMLDSEQAAAQIACGTCVRLTEHVTVLDSVPAA 528          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A7S0CZI0_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CZI0_9EUKA)

HSP 1 Score: 178 bits (452), Expect = 4.090e-47
Identity = 110/301 (36.54%), Postives = 143/301 (47.51%), Query Frame = 1
Query:   31 LWKELGPFSASE--VPARQSLNAEDALWKA------DDMGLNWLLHLDIDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSW--FGGRLPIAPCFHLDARDA 903
            L K LG    +   V ARQ LNA +AL  A          + +L+H+DIDELF+T   SI PHF  L S G+  +TYANHE +P R ++ +YF ++ LFR N L L LS    +   F+  RT H QY L YDNGK+AV+V P  + P++VH W+                                                           R   GQG        R+V+  A+VD R L     ++  DPC+LHYPVCG  WLR KY +LG FP+ W     ++ I PCFHLDAR A
Sbjct:   83 LIKRLGGIGVTRDHVTARQILNASEALKTALKAPENSSRHVEYLVHIDIDELFYTKSNSIIPHFRWLKSQGIHHITYANHEGIPHRTDIDNYFTQITLFRRNLLTLSLSPSTKKSVSFFTSRTPHHQYFLFYDNGKSAVRVQPG-VFPKNVHGWSL---------------------------------------------------------PRPEMGQGMQSEGKSKRMVS--ALVDARNLNLKGYVDVRDPCILHYPVCGERWLRSKYEILGPFPTHWPSLERKVNIPPCFHLDARKA 323          
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Match: A0A024UKF7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKF7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 2.890e-45
Identity = 121/378 (32.01%), Postives = 160/378 (42.33%), Query Frame = 1
Query:   25 CRLWKELGPFSASEVPARQSLNAEDAL-----WK------ADDMGLNWLLHLDIDELFFTVEPSIKPHFDRL------SSLGVEQMTYANHEAVPCRENVKDYFREVQLFRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVPQSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRSSSXXXXXXXXXQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEVLE-CNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARDAIHGKPCGPCGQSAERDAAGDAARELYLREVMLCPDQHAEEIRHQLDDGVLRVFSMPAAVIEKVLRIQ 1104
            C L+  L P  + EV ARQ LN E A+     W       A    L WL+HLD+DEL +          D L      +S  + Q T+ NHEA+P   NV +YF EV  F+VN LV P +S        WR RTTH QYMLAYDNGK+AV++    ++P SVH W                                                                     PS     L   T   DPR +     +     P +LHYP CG DW ++KYR LG FP +WF G+LPI PCFH  ARD         C ++ +  A     R LY  +VML      + +  Q+D GV+     P+  ++++L +Q
Sbjct:   80 CSLYAALQPSISDEVHARQQLNCELAMTSCLTWNEIARTDASRTPLEWLVHLDLDELLYYPSNHDDDRNDGLHMFFASASPSIHQFTFVNHEAIPTTANVSNYFVEVSHFKVNHLVAPFTSAAQACMNRWRDRTTHRQYMLAYDNGKSAVRIR-RGVLPSSVHSWQPH------------------------------------------------------------------PS-----LATVTNFPDPRRMNMATTISHTTSPWILHYPSCGYDWFKEKYRTLGRFPDAWFQGKLPIQPCFHTTARDVW-----ATCVETHDEKAM----RTLYHEQVML---DDPDGLEAQIDAGVVVHLLGPSKRLQRLLGLQ 373          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53548.12711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7V2_ECTSI2.550e-15553.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SWB6_9STRA1.140e-6840.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4ECQ6_9STRA3.210e-5537.71Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A0G4G3M5_VITBC4.410e-5439.06Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A6G0X5T9_9STRA4.840e-4934.10Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A812V5V9_SYMPI4.860e-4933.63Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A835YS67_9STRA1.520e-4739.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Q9C9W9_SYMMI1.850e-4732.87Oxidized purine nucleoside triphosphate hydrolase ... [more]
A0A7S0CZI0_9EUKA4.090e-4736.54Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A024UKF7_9STRA2.890e-4532.01Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53548contigH-elongata_contig53548:917..3098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score468.4
Seed ortholog evalue3.9e-129
Seed eggNOG ortholog2880.D7G7V2
EggNOG free text desc.cell wall organization
EggNOG OGs2CMCT@1,2QPZC@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1383
Cds size1383
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930873.7639666-CDS-H-elongata_contig53548:916..10751622930873.7639666-CDS-H-elongata_contig53548:916..1075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53548 917..1075 +
1691679606.6076212-CDS-H-elongata_contig53548:916..10751691679606.6076212-CDS-H-elongata_contig53548:916..1075Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53548 917..1075 +
1622930873.7779188-CDS-H-elongata_contig53548:1874..30981622930873.7779188-CDS-H-elongata_contig53548:1874..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53548 1875..3098 +
1691679606.6170485-CDS-H-elongata_contig53548:1874..30981691679606.6170485-CDS-H-elongata_contig53548:1874..3098Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig53548 1875..3098 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53548.12711.1prot_H-elongata_contig53548.12711.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig53548 917..3098 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig53548.12711.1

>prot_H-elongata_contig53548.12711.1 ID=prot_H-elongata_contig53548.12711.1|Name=mRNA_H-elongata_contig53548.12711.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=461bp
QRRRQQTNCRLWKELGPFSASEVPARQSLNAEDALWKADDMGLNWLLHLD
IDELFFTVEPSIKPHFDRLSSLGVEQMTYANHEAVPCRENVKDYFREVQL
FRVNQLVLPLSSVVGERTRFWRRRTTHGQYMLAYDNGKAAVKVLPTRIVP
QSVHRWTTLITSGPRGNPDDPDYDQDPTGTDLRCLEGEYFGRKAAEGTRS
SSSSSRSSSSSQGCGERETRGQGRTPSDVVDRLVNRTAMVDPRGLRFDEV
LECNDPCVLHYPVCGLDWLRDKYRLLGGFPSSWFGGRLPIAPCFHLDARD
AIHGKPCGPCGQSAERDAAGDAARELYLREVMLCPDQHAEEIRHQLDDGV
LRVFSMPAAVIEKVLRIQRGTPGVPITPERLTSPDMPRKGSEGWNECVVK
HDRESDERMTECATSSVTEATAKSNGFPGRSSKGNTAEIGSMATEFDNSW
ILAACAREFL*
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mRNA from alignment at H-elongata_contig53548:917..3098+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig53548.12711.1 ID=mRNA_H-elongata_contig53548.12711.1|Name=mRNA_H-elongata_contig53548.12711.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2182bp|location=Sequence derived from alignment at H-elongata_contig53548:917..3098+ (Himanthalia elongata Himel1 dioecious)
CAGAGACGGCGACAGCAAACCAATTGTCGACTTTGGAAGGAACTGGGCCC ATTTAGCGCCTCGGAGGTTCCAGCTCGGCAAAGTCTCAACGCCGAGGACG CCTTGTGGAAAGCGGACGACATGGGCTTGAACTGGCTTTTGCACCTGGAC ATTGATGAGGTAACTAACTGTAACGTAACCTCTGACGTCCATTTTCAAAA TGATGCAACGCCTTTTTTCTACCTGTGGTATTCAGTCACCTCACCTCACC TCACCTCACCTTTAGCAAGTGCATTTGCCAAACCCCAGCCATATAATTCA AGATTATACAAAAGCTATCGCTGTAGCTCTAATAACTAGAGAAAATTGTC GAAGGCTAAATATATACAGGGGTAATTAGAAGGTACTCTTTCTATTAGAA AATATCACGTCTATTAAAAGGTACTATTTCTATTAGAAGGTACTATTTCT ACTAAACCAGAAATACCGAAGATTGAAAGAAGAAACAACGAATTAAAAAG CATACTAGTAATCCTTTCCCGTCCTTATTAACAGCCCAAAGAAAGCTACA ATATCATAGGAACAGGACTAACACCGCAAAGTGAACTGCTGGAGCCTAAT ACATTGGAGATAAAAAAAATCCCTTCCTTTCTTTTAAGTCTCGCCCTGGA GACTAATAGCATCAATCCTAACCCTAACCCTAACCCTTAAGTCTGGAACG CCGGTAGACCAGAAGTTACACTCTTATCATACCTTTATCTGCCTCTAGAA GACGAAAACCTTTACCAGTCTTTCCAGCACACTGTGGCGACCATTTTGCC ATGATCCTCGCCTGACAGGCATTCCTTAGTGCTAGATGTAATAGCCCTGA AACGTTTCACGGCCTGGCATGTCCCACGGAATGCAAGTCAAAAGCTCGCA CCATCCTTACTATCCTTACCGTCTTTGTCGTCCGAATGCGGCGGGATTAA ATGCGCAGCTTTTTTTCACCGTCGAGCCTTCGATCAAGCCTCACTTCGAC CGCCTCAGCTCGCTAGGAGTGGAACAGATGACCTACGCCAACCACGAGGC CGTGCCGTGTCGCGAGAACGTCAAGGACTACTTTAGAGAAGTCCAGCTGT TCCGCGTCAACCAGCTAGTGCTACCGCTGTCCAGCGTCGTCGGAGAGCGC ACCCGCTTCTGGCGACGGAGAACGACCCACGGGCAATACATGCTGGCGTA CGATAATGGAAAAGCAGCGGTGAAGGTGCTGCCGACCAGAATCGTCCCAC AAAGCGTGCATCGGTGGACGACCCTCATCACGTCGGGGCCCAGAGGCAAC CCCGACGACCCTGACTACGATCAGGATCCCACCGGTACCGACCTTCGGTG TTTGGAAGGGGAATATTTCGGTAGGAAAGCTGCAGAGGGAACCAGATCCA GCAGTAGCAGCAGCAGATCCAGCAGTAGCTCGCAAGGCTGTGGGGAGAGA GAGACAAGGGGGCAAGGGAGGACGCCTTCGGATGTAGTCGACAGACTGGT GAACCGAACCGCCATGGTGGACCCCCGAGGGTTGCGCTTCGACGAGGTTT TGGAATGTAACGACCCCTGTGTGCTACACTACCCTGTGTGCGGGCTGGAC TGGCTAAGGGACAAGTACCGTCTGCTGGGCGGCTTCCCGTCCTCGTGGTT CGGCGGAAGGTTGCCGATCGCGCCATGCTTTCACCTCGACGCGCGCGACG CTATCCACGGCAAGCCGTGTGGCCCGTGCGGTCAGAGTGCGGAGCGGGAC GCTGCGGGAGATGCGGCCCGAGAATTATACCTTCGAGAGGTGATGTTGTG TCCCGACCAGCACGCGGAGGAGATACGTCATCAGCTGGACGACGGGGTCT TGAGAGTTTTCTCCATGCCGGCTGCTGTCATCGAAAAAGTTCTTCGAATC CAGCGAGGGACGCCGGGGGTACCGATTACCCCTGAGAGGCTAACGTCCCC AGATATGCCGCGGAAAGGGTCAGAAGGTTGGAATGAATGTGTGGTGAAGC ACGATAGAGAAAGTGACGAGAGGATGACGGAGTGCGCCACGTCATCGGTC ACCGAAGCGACGGCGAAAAGCAATGGTTTTCCGGGTAGAAGTTCGAAAGG GAATACCGCTGAAATTGGTTCGATGGCTACGGAGTTCGACAACTCTTGGA TTCTTGCCGCGTGCGCTCGAGAATTTTTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig53548:917..3098+

>mRNA_H-elongata_contig53548.12711.1 ID=mRNA_H-elongata_contig53548.12711.1|Name=mRNA_H-elongata_contig53548.12711.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2766bp|location=Sequence derived from alignment at H-elongata_contig53548:917..3098+ (Himanthalia elongata Himel1 dioecious)
CAGAGACGGCGACAGCAAACCAATTGTCGACTTTGGAAGGAACTGGGCCC
ATTTAGCGCCTCGGAGGTTCCAGCTCGGCAAAGTCTCAACGCCGAGGACG
CCTTGTGGAAAGCGGACGACATGGGCTTGAACTGGCTTTTGCACCTGGAC
ATTGATGAGCAGAGACGGCGACAGCAAACCAATTGTCGACTTTGGAAGGA
ACTGGGCCCATTTAGCGCCTCGGAGGTTCCAGCTCGGCAAAGTCTCAACG
CCGAGGACGCCTTGTGGAAAGCGGACGACATGGGCTTGAACTGGCTTTTG
CACCTGGACATTGATGAGCTTTTTTTCACCGTCGAGCCTTCGATCAAGCC
TCACTTCGACCGCCTCAGCTCGCTAGGAGTGGAACAGATGACCTACGCCA
ACCACGAGGCCGTGCCGTGTCGCGAGAACGTCAAGGACTACTTTAGAGAA
GTCCAGCTGTTCCGCGTCAACCAGCTAGTGCTACCGCTGTCCAGCGTCGT
CGGAGAGCGCACCCGCTTCTGGCGACGGAGAACGACCCACGGGCAATACA
TGCTGGCGTACGATAATGGAAAAGCAGCGGTGAAGGTGCTGCCGACCAGA
ATCGTCCCACAAAGCGTGCATCGGTGGACGACCCTCATCACGTCGGGGCC
CAGAGGCAACCCCGACGACCCTGACTACGATCAGGATCCCACCGGTACCG
ACCTTCGGTGTTTGGAAGGGGAATATTTCGGTAGGAAAGCTGCAGAGGGA
ACCAGATCCAGCAGTAGCAGCAGCAGATCCAGCAGTAGCTCGCAAGGCTG
TGGGGAGAGAGAGACAAGGGGGCAAGGGAGGACGCCTTCGGATGTAGTCG
ACAGACTGGTGAACCGAACCGCCATGGTGGACCCCCGAGGGTTGCGCTTC
GACGAGGTTTTGGAATGTAACGACCCCTGTGTGCTACACTACCCTGTGTG
CGGGCTGGACTGGCTAAGGGACAAGTACCGTCTGCTGGGCGGCTTCCCGT
CCTCGTGGTTCGGCGGAAGGTTGCCGATCGCGCCATGCTTTCACCTCGAC
GCGCGCGACGCTATCCACGGCAAGCCGTGTGGCCCGTGCGGTCAGAGTGC
GGAGCGGGACGCTGCGGGAGATGCGGCCCGAGAATTATACCTTCGAGAGG
TGATGTTGTGTCCCGACCAGCACGCGGAGGAGATACGTCATCAGCTGGAC
GACGGGGTCTTGAGAGTTTTCTCCATGCCGGCTGCTGTCATCGAAAAAGT
TCTTCGAATCCAGCGAGGGACGCCGGGGGTACCGATTACCCCTGAGAGGC
TAACGTCCCCAGATATGCCGCGGAAAGGGTCAGAAGGTTGGAATGAATGT
GTGGTGAAGCACGATAGAGAAAGTGACGAGAGGATGACGGAGTGCGCCAC
GTCATCGGTCACCGAAGCGACGGCGAAAAGCAATGGTTTTCCGGGTAGAA
GTTCGAAAGGGAATACCGCTGAAATTGGTTCGATGGCTACGGAGTTCGAC
AACTCTTGGATTCTTGCCGCGTGCGCTCGAGAATTTTTGTAGCTTTTTTT
CACCGTCGAGCCTTCGATCAAGCCTCACTTCGACCGCCTCAGCTCGCTAG
GAGTGGAACAGATGACCTACGCCAACCACGAGGCCGTGCCGTGTCGCGAG
AACGTCAAGGACTACTTTAGAGAAGTCCAGCTGTTCCGCGTCAACCAGCT
AGTGCTACCGCTGTCCAGCGTCGTCGGAGAGCGCACCCGCTTCTGGCGAC
GGAGAACGACCCACGGGCAATACATGCTGGCGTACGATAATGGAAAAGCA
GCGGTGAAGGTGCTGCCGACCAGAATCGTCCCACAAAGCGTGCATCGGTG
GACGACCCTCATCACGTCGGGGCCCAGAGGCAACCCCGACGACCCTGACT
ACGATCAGGATCCCACCGGTACCGACCTTCGGTGTTTGGAAGGGGAATAT
TTCGGTAGGAAAGCTGCAGAGGGAACCAGATCCAGCAGTAGCAGCAGCAG
ATCCAGCAGTAGCTCGCAAGGCTGTGGGGAGAGAGAGACAAGGGGGCAAG
GGAGGACGCCTTCGGATGTAGTCGACAGACTGGTGAACCGAACCGCCATG
GTGGACCCCCGAGGGTTGCGCTTCGACGAGGTTTTGGAATGTAACGACCC
CTGTGTGCTACACTACCCTGTGTGCGGGCTGGACTGGCTAAGGGACAAGT
ACCGTCTGCTGGGCGGCTTCCCGTCCTCGTGGTTCGGCGGAAGGTTGCCG
ATCGCGCCATGCTTTCACCTCGACGCGCGCGACGCTATCCACGGCAAGCC
GTGTGGCCCGTGCGGTCAGAGTGCGGAGCGGGACGCTGCGGGAGATGCGG
CCCGAGAATTATACCTTCGAGAGGTGATGTTGTGTCCCGACCAGCACGCG
GAGGAGATACGTCATCAGCTGGACGACGGGGTCTTGAGAGTTTTCTCCAT
GCCGGCTGCTGTCATCGAAAAAGTTCTTCGAATCCAGCGAGGGACGCCGG
GGGTACCGATTACCCCTGAGAGGCTAACGTCCCCAGATATGCCGCGGAAA
GGGTCAGAAGGTTGGAATGAATGTGTGGTGAAGCACGATAGAGAAAGTGA
CGAGAGGATGACGGAGTGCGCCACGTCATCGGTCACCGAAGCGACGGCGA
AAAGCAATGGTTTTCCGGGTAGAAGTTCGAAAGGGAATACCGCTGAAATT
GGTTCGATGGCTACGGAGTTCGACAACTCTTGGATTCTTGCCGCGTGCGC
TCGAGAATTTTTGTAG
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