prot_H-elongata_contig53536.12705.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53536.12705.1
Unique Nameprot_H-elongata_contig53536.12705.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: D8LHL7_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHL7_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.030e-31
Identity = 65/112 (58.04%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 MGFKSPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKG-NKVAVFSWTRCSTALFLEKKIASRL-------FVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            MGFKSP+D LK+GI +  AG YD+ AV + +  Y  G NKV VFSWTRC      +  I   L       FVELDE  DG+AIR EL + TGRTSVPQIWI GEFVGGCNDG
Sbjct:   65 MGFKSPVDVLKQGIAKIGAGPYDKDAVVKVVDGYTSGSNKVVVFSWTRCPFCKKAKGLIEDLLADPADYEFVELDERQDGNAIRYELSQKTGRTSVPQIWIGGEFVGGCNDG 176          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A8J9RIT3_9CHLO (Probable Glutaredoxin at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RIT3_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 1.350e-27
Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0
Query:    5 SPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCSTALFLEKKI----ASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SP + +K+ I  A+AG YDE A+   +  YIK N V VFSWTRC   +  ++++    A  L VELD M DG+AIR+EL + T RTS+P +WI+GE +GGCNDG
Sbjct:   67 SPANAVKKAIAAAQAGQYDEAAIGGKVDAYIKDNPVVVFSWTRCPFCIKAKRELDSLNAKYLAVELDTMADGNAIRSELAKRTNRTSMPNVWINGEGIGGCNDG 170          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: K0TLI2_THAOC (Glutaredoxin domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLI2_THAOC)

HSP 1 Score: 98.6 bits (244), Expect = 9.980e-24
Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    5 SPLDGL-------KRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCSTALFLEKKIASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SPLD +       K G+V++ AG+YD  A++  + Q I  NKV ++S+T       L++K A    +ELD+  DG AIR ELG++ GRTSVP IWIDG+F+GGCNDG
Sbjct:   58 SPLDNILGFIKGGKIGLVKSIAGEYDADAIRLRVDQDIAKNKVLMYSFTTVKAKAVLDEKNAKYTAIELDKDEDGKAIRAELGDILGRTSVPAIWIDGKFIGGCNDG 164          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A835YLP8_9STRA (Selenoprotein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP8_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 3.170e-22
Identity = 51/107 (47.66%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    5 SPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCSTALFLEKKIASRL------FVELDEMGD-GDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SP +  K+ I +A  G+Y+E  V   I  YI  NKV VFSWT C      + ++A  +       VELD+  + G A R EL ++TGRTSVPQIWI GEF+GGCNDG
Sbjct:   57 SPFNQFKKFIAKAGTGEYNEAEVAGKINSYIADNKVMVFSWTNCPFCKKAKAQLAELMEPSQYKVVELDQDAELGKAYRFELSKITGRTSVPQIWIKGEFIGGCNDG 163          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A2P6TGA2_CHLSO (Glyoxalase domain-containing 4 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGA2_CHLSO)

HSP 1 Score: 90.5 bits (223), Expect = 9.930e-21
Identity = 51/105 (48.57%), Postives = 63/105 (60.00%), Query Frame = 0
Query:    7 LDGLKRGIVRAK---AGDYDEGAVQEAIGQYIKGNKVAVFSWTRCS----TALFLEKKIASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            LD   +G V+A    AG YDE A + AI +YI  N V VFSW+ C         L+   A    +ELD+M DG A+R EL + TGR+SVP IWI G+ VGGCNDG
Sbjct:   47 LDFFNQGKVQAAVAAAGQYDEAATKAAIEKYIADNPVVVFSWSGCPFCKRAKAVLDATGAKYTALELDQMADGKALRAELAKKTGRSSVPNIWIAGQNVGGCNDG 151          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A383W3I8_TETOB (Glutaredoxin domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W3I8_TETOB)

HSP 1 Score: 90.5 bits (223), Expect = 1.380e-20
Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = 0
Query:    5 SPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRC----STALFLEKKIASRLFVELDEMG-DGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SP++  K+ + +A+AGDYDE AV+  I   IK NKV VFSW+ C    +    L    A    +ELD +G +G  IR EL  MT RTSVP IWI G+ VGGCNDG
Sbjct:   60 SPINEGKKALAKAQAGDYDEKAVRGKIEGLIKDNKVMVFSWSGCPFCKNAKALLSDVGADFTALELDTLGQEGKQIRAELAAMTERTSVPNIWIAGKNVGGCNDG 164          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: F0YJ46_AURAN (Selenoprotein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ46_AURAN)

HSP 1 Score: 89.7 bits (221), Expect = 2.340e-20
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 0
Query:    5 SPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTR---CSTAL-FLEKKIASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SPL+  K+ +V+  AG YDE AV+  +   I G  V + S+ R   C  A   L+ K A    VELDE+ DG A+R ELG + GRTSVP IWI  +FVGGCNDG
Sbjct:   55 SPLNEGKKAVVKMLAGPYDEVAVRAKLDGLIAGEPVLMLSFVRXPFCVKAKQLLDAKGAKYTVVELDEVSDGPALRAELGGLVGRTSVPAIWIQSDFVGGCNDG 158          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A2V0PHJ4_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHJ4_9CHLO)

HSP 1 Score: 88.6 bits (218), Expect = 7.230e-20
Identity = 48/106 (45.28%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    4 KSPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCS----TALFLEKKIASRLFVELDEMG-DGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            +SPL+  K+ + + +AGDYDE AV+  +   + G  V +FS++ C         L +  AS   +EL+EMG DG  +R EL +MT RTS+P IWI G FVGGCNDG
Sbjct:   56 ESPLNKGKKALAKLQAGDYDEAAVRAKLEGILTGTPVVMFSFSTCPFCNRAKALLNELGASYEAIELNEMGKDGMQLRAELAQMTDRTSMPSIWIQGSFVGGCNDG 161          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A1Z5KEB6_FISSO (Glutaredoxin domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KEB6_FISSO)

HSP 1 Score: 87.0 bits (214), Expect = 2.740e-19
Identity = 48/102 (47.06%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    7 LDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCSTAL----FLEKKIASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            L   K+ +VR  AG+YD  AV+  I   IK N V + S+T C   +     L+ K A+   VEL+E   G AIR EL ++ GR+SVP IWI GEF+GGCNDG
Sbjct:   57 LKDAKKALVRKLAGEYDSEAVRARIDNLIKTNDVLMLSFTTCPYCIKAKQVLDAKSANYTVVELNEDPAGTAIRAELFDLVGRSSVPAIWIGGEFIGGCNDG 158          
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Match: A0A061R5D6_9CHLO (Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5D6_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 1.590e-18
Identity = 49/105 (46.67%), Postives = 66/105 (62.86%), Query Frame = 0
Query:    5 SPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCSTAL----FLEKKIASRLFVELDEMG-DGDAIRNELGEMTGRTSVPQIWIDGEFVGGCNDG 104
            SPL+  K  + + +AGDYD+ AV+  +   I   KV VFS++ C   +     L+   A    VEL++MG +G AIR EL E+TGRTS+P IWI GE +GGCNDG
Sbjct:   86 SPLNKGKIELAKLQAGDYDKTAVRAKVENXISSEKVVVFSFSTCPFCVKAKELLQDVGAEYEAVELNDMGKEGYAIRAELAELTGRTSMPNIWIAGEGIGGCNDG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53536.12705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHL7_ECTSI1.030e-3158.04Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A8J9RIT3_9CHLO1.350e-2750.00Probable Glutaredoxin at C-terminar half n=1 Tax=C... [more]
K0TLI2_THAOC9.980e-2447.66Glutaredoxin domain-containing protein n=1 Tax=Tha... [more]
A0A835YLP8_9STRA3.170e-2247.66Selenoprotein n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A2P6TGA2_CHLSO9.930e-2148.57Glyoxalase domain-containing 4 n=1 Tax=Chlorella s... [more]
A0A383W3I8_TETOB1.380e-2049.52Glutaredoxin domain-containing protein n=1 Tax=Tet... [more]
F0YJ46_AURAN2.340e-2049.04Selenoprotein (Fragment) n=1 Tax=Aureococcus anoph... [more]
A0A2V0PHJ4_9CHLO7.230e-2045.28Glutaredoxin domain-containing protein n=1 Tax=Rap... [more]
A0A1Z5KEB6_FISSO2.740e-1947.06Glutaredoxin domain-containing protein n=1 Tax=Fis... [more]
A0A061R5D6_9CHLO1.590e-1846.67Glutaredoxin-like protein n=1 Tax=Tetraselmis sp. ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 40..58
score: 21.49
coord: 81..94
score: 41.37
coord: 95..104
score: 27.68
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 59..98
e-value: 1.3E-6
score: 28.6
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 28..104
score: 12.77
NoneNo IPR availableGENE3D3.40.30.10coord: 25..104
e-value: 9.1E-18
score: 65.9
NoneNo IPR availablePANTHERPTHR45694FAMILY NOT NAMEDcoord: 29..103
NoneNo IPR availablePANTHERPTHR45694:SF5GLUTAREDOXIN 2coord: 29..103
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 29..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53536contigH-elongata_contig53536:1350..2457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53536.12705.1mRNA_H-elongata_contig53536.12705.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53536 1350..2457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53536.12705.1 ID=prot_H-elongata_contig53536.12705.1|Name=mRNA_H-elongata_contig53536.12705.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
MGFKSPLDGLKRGIVRAKAGDYDEGAVQEAIGQYIKGNKVAVFSWTRCST
ALFLEKKIASRLFVELDEMGDGDAIRNELGEMTGRTSVPQIWIDGEFVGG
CNDG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf