prot_H-elongata_contig53519.12699.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53519.12699.1
Unique Nameprot_H-elongata_contig53519.12699.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length376
Homology
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BLAST of mRNA_H-elongata_contig53519.12699.1 vs. uniprot
Match: D7FRU4_ECTSI (BZIP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU4_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 8.960e-25
Identity = 111/294 (37.76%), Postives = 137/294 (46.60%), Query Frame = 0 
Query:   27 LAVTSGVGTPILPLTFVPAF-GPLGGNPAVTSAAFSALPSL-VGELTYAAASGWKRPRSAENETCGAHDG---GQTRLLSSSSIRGKGQATAPNNPVNKRAKRQERLMKNREAANRSRIKRKEIQSELENRVATLSSSLTASREENDTLKQEMAXXXXXXSFLRGMLSARGSANELSHVLPTSA----IRKLSGSDGVAGVEVATGMSAVVGAIGTVLAVVSYAGPSETNSV------------------------QDVDDQTLGNLSGIESRQAGGRRMLLSLE------SYP 281
            LAV+SG GTPILPL F P F G    +        SA P+L       AA    KR R  +    GA  G                          + KRA+R+ERLMKNREAANRSR+KRKE+ SELENR  TLS SL ASR+E  +LKQE+A      SFLRGMLSA GSA +L  ++P+ A    +R      G            ++GA+GT LAV+S    S                             + V +    + SG  SR  GGRR LLS++      SYP
Sbjct:  211 LAVSSGAGTPILPLAFTPRFSGTSNSSXXXXXXXLSAFPALNFSGFQAAAGQALKRLRGGD-APAGAASGQPCAXXXXXXXXXXXXXXXXXXXXGRITKRARREERLMKNREAANRSRVKRKEVLSELENRADTLSKSLAASRDETASLKQEIASLREQNSFLRGMLSAHGSAIDLPPIMPSGASSDSLRSHRNGGGRXXXXXXXXXXXIIGAVGTGLAVISCVALSAXXXXXXXXXXXEPRAGYNGGFXXXXGDGRGVGESAYASRSGFGSRSMGGRRTLLSVDESDSFDSYP 503
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53519.12699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRU4_ECTSI8.960e-2537.76BZIP domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 160..187
NoneNo IPR availableGENE3D1.20.5.170coord: 123..188
e-value: 2.3E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR46164FAMILY NOT NAMEDcoord: 114..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..326
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..307
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 327..375
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 123..178
NoneNo IPR availableTMHMMTMhelixcoord: 308..330
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 119..183
e-value: 1.6E-7
score: 41.0
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 120..181
e-value: 7.1E-11
score: 42.0
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 127..141
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 121..184
score: 10.772

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53519contigH-elongata_contig53519:851..2419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53519.12699.1mRNA_H-elongata_contig53519.12699.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53519 16..2643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53519.12699.1 ID=prot_H-elongata_contig53519.12699.1|Name=mRNA_H-elongata_contig53519.12699.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=376bp
MMASSKAESQPTWQAACSNDDISPKPLAVTSGVGTPILPLTFVPAFGPLG
GNPAVTSAAFSALPSLVGELTYAAASGWKRPRSAENETCGAHDGGQTRLL
SSSSIRGKGQATAPNNPVNKRAKRQERLMKNREAANRSRIKRKEIQSELE
NRVATLSSSLTASREENDTLKQEMAALREDNSFLRGMLSARGSANELSHV
LPTSAIRKLSGSDGVAGVEVATGMSAVVGAIGTVLAVVSYAGPSETNSVQ
DVDDQTLGNLSGIESRQAGGRRMLLSLESYPFKAAGDQSAAGITAVVRCV
MESETVRFVGLGLTLIAIVTLLFHLARSIYNVALQHANGGHGRQVGIMSK
AFQRKSRQNGKKCSRLIGCGICHVQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP