prot_H-elongata_contig116091.1269.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116091.1269.1
Unique Nameprot_H-elongata_contig116091.1269.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length195
Homology
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A6H5KJH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH4_9PHAE)

HSP 1 Score: 103 bits (258), Expect = 2.320e-22
Identity = 56/75 (74.67%), Postives = 66/75 (88.00%), Query Frame = 0 
Query:    5 QVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTMGNL 79
            QVS+LS LVSLK+RKN+L++VPPE+F LE L+LLDLTGN IRELPEE L AAV LK LLLSGNRLS LPS++G+L
Sbjct:   26 QVSNLSVLVSLKLRKNRLSAVPPELFSLESLSLLDLTGNAIRELPEEGLCAAVALKGLLLSGNRLSRLPSSVGSL 100
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: D8LFI7_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI7_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 6.130e-22
Identity = 128/191 (67.02%), Postives = 140/191 (73.30%), Query Frame = 0 
Query:    6 VSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTMGNLEGLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DFPSLPQTDRLAQVFIGFNLLTDLDVTSLLRVS 195
            VS+LS LVSLK+RKN+L+SVPPE+F LE L+LLDLTGN IRELPEE LGAAV LK LLLSGNRLS LPS++       XXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     + P LP+  RLAQVF+GFNLLT LD  +LL VS
Sbjct:  133 VSNLSVLVSLKLRKNRLSSVPPELFSLESLSLLDLTGNAIRELPEEGLGAAVALKGLLLSGNRLSRLPSSVXXXXXXXXXXXXXXXXXXXXXSIDGLKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNGLARLGALTSLDLRENKLTEVPPLPEGGRLAQVFLGFNLLTSLDGAALLGVS 323
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A3F2RWM2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWM2_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.850e-6
Identity = 29/74 (39.19%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:    4 DQVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTMG 77
            D++++L+++ S+K+ +N L ++P   F L+ L  LDL+ N + +   E+ GA   LK L+LSGN+LS LP+++G
Sbjct:   28 DEIATLTSVTSIKLCQNALQTLPEGFFELQTLTYLDLSHNQLDQNLSERFGALTSLKELVLSGNKLSCLPNSIG 101
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A6G0PK55_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PK55_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 7.300e-6
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0 
Query:    4 DQVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTM 76
            D+++ L+++ S+K+ KN L  +P   F L+ L  LDL+ N + +   E  GA V LK L+LSGN+LS LP ++
Sbjct:   86 DEIAGLTSVTSIKLTKNALQVLPEGFFELQALTYLDLSHNQLEQDLSESFGALVGLKELVLSGNKLSRLPDSI 158
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A329S1P8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S1P8_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.880e-6
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:    4 DQVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTMGNLE 80
            D++  L+++ S+K+ KN L  +P   F L+ L  LDL+ N + +   E  GA   LK L+LSGN+LS LP+++  LE
Sbjct:   85 DEIGGLTSVTSIKLTKNALQVLPERFFELQTLTYLDLSYNRLEQDLSESFGALAGLKELVLSGNKLSRLPNSITLLE 161
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A418CIW4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CIW4_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.330e-5
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    6 VSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPST 75
            +  LS L+S KM +N+L  VP E+F L  LA LDL+ N +     + LG    LK L+LSGN+L+S+P++
Sbjct:   93 IQGLSGLLSFKMCQNKLVEVPVELFSLTSLAYLDLSNNCLSGAFPDPLGRLNKLKELVLSGNKLTSVPAS 162
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A833WIV5_PHYIN (Leucine rich repeat n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WIV5_PHYIN)

HSP 1 Score: 55.1 bits (131), Expect = 1.770e-5
Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:    4 DQVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTMGNLE 80
            D++  L+++ S+K+ KN L  +P   F L  L  LDL+ N + +   E  GA + LK L LSGN+LS LP+++  LE
Sbjct:   13 DEIGGLTSVTSIKLTKNALQVLPEGFFELHALTYLDLSHNELEQNLSESFGALIGLKELGLSGNKLSHLPNSITLLE 89
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: W4GPG4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GPG4_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.130e-5
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    6 VSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPST 75
            +  LS L+S KM +N+L  VP E+F L  LA LDL+ N +     + LG    LK L+LSGN+L+S+P++
Sbjct:   93 IQGLSGLLSFKMCQNKLVDVPVELFSLTSLAYLDLSNNCLGGAFPDPLGRLNNLKELVLSGNKLTSVPAS 162
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: W4GRJ5_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GRJ5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 3.300e-5
Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 0 
Query:    6 VSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPST 75
            +  LS L+S KM +N+L  VP E+F L  LA LDL+ N +     + LG    LK L+LSGN+L+S+P++
Sbjct:   93 IQGLSGLLSFKMCQNKLVDVPVELFSLTSLAYLDLSNNCLGGAFPDPLGRLNNLKELVLSGNKLTSVPAS 162
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BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Match: A0A6G0WJS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJS3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.110e-5
Identity = 27/72 (37.50%), Postives = 47/72 (65.28%), Query Frame = 0 
Query:    5 QVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPEEQLGAAVLLKSLLLSGNRLSSLPSTM 76
            Q+ +L +++S K+ +N+++++P E+F L  LA LDL+ N +       LG    LK L+LS N+LS+LP ++
Sbjct:   92 QIGTLKSVISFKICQNKISAIPQELFSLNLLAYLDLSNNCLVGEISPNLGQLQALKELVLSSNKLSALPESL 163
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116091.1269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5KJH4_9PHAE2.320e-2274.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFI7_ECTSI6.130e-2267.02Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A3F2RWM2_9STRA3.850e-639.19Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A6G0PK55_9STRA7.300e-641.10Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
A0A329S1P8_9STRA9.880e-640.26Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A418CIW4_9STRA1.330e-544.29Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A833WIV5_PHYIN1.770e-540.26Leucine rich repeat n=2 Tax=Phytophthora infestans... [more]
W4GPG4_9STRA3.130e-544.29Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
W4GRJ5_9STRA3.300e-544.29Uncharacterized protein n=10 Tax=Aphanomyces astac... [more]
A0A6G0WJS3_9STRA8.110e-537.50Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 102..124
e-value: 41.0
score: 8.2
coord: 57..78
e-value: 140.0
score: 3.9
coord: 79..101
e-value: 4.7
score: 16.0
coord: 9..32
e-value: 0.17
score: 20.9
coord: 125..147
e-value: 79.0
score: 5.9
coord: 148..173
e-value: 19.0
score: 11.0
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 102..121
e-value: 13.0
score: 12.8
coord: 148..167
e-value: 6.4
score: 15.2
coord: 79..98
e-value: 30.0
score: 10.1
coord: 56..75
e-value: 25.0
score: 10.6
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 4..126
NoneNo IPR availablePANTHERPTHR16083:SF20LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40coord: 59..186
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 4..126
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 59..186
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 7..187
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 3..92
e-value: 2.6E-20
score: 74.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 93..194
e-value: 3.0E-18
score: 67.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 119..161
e-value: 6.9E-7
score: 28.9
coord: 59..115
e-value: 9.2E-10
score: 38.2
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 34..55
score: 5.818
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 81..102
score: 6.957
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 11..32
score: 6.287
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 104..126
score: 5.356
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 172..193
score: 4.562
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 127..149
score: 4.793
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 150..171
score: 7.704
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 58..79
score: 6.849

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116091contigH-elongata_contig116091:818..2073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116091.1269.1mRNA_H-elongata_contig116091.1269.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116091 818..2073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116091.1269.1 ID=prot_H-elongata_contig116091.1269.1|Name=mRNA_H-elongata_contig116091.1269.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp
MRLDQVSSLSALVSLKMRKNQLTSVPPEVFLLECLALLDLTGNVIRELPE
EQLGAAVLLKSLLLSGNRLSSLPSTMGNLEGLETLELSDNNLRFLPESIG
RLRRLTALTASNNALNRLPESLGGLSAVALLDLSRNAVERIPQGLARLES
LTSLDLRENKLEDFPSLPQTDRLAQVFIGFNLLTDLDVTSLLRVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt