mRNA_H-elongata_contig5346.12689.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 592 bits (1526), Expect = 4.750e-186 Identity = 323/707 (45.69%), Postives = 434/707 (61.39%), Query Frame = 1
Query: 469 SSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYLDEG-----LSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDD-CDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVSEDLA-TGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLVDQAGDHDSPSMML-ISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIVARNFN--DQVEDPRPRFRSARSWTTTR 2559
S+L++ G +A+LGGL+V + +FI N A+VAGGAV +S TG GPIFT A F SNSA+VGG + G+G + TFD C FI+NRA ATGGAI+SA G + F N+A GG LRL G SL D GG A+S IG +L +EN FS N +DC+ G +L+ + GN +EAAC GC+ CD C E TC+ VMEH TS GG+VTL + +E GYWRA+ SS + ACYN AC GGVTG +C +GY GPYCAVC++ Y F+CT+CS G + A +LA V+ V F Y +S + G+ RL + +PL+SVK++I AWQILTQF +VANV YP +Y+ FL+ DV NFD +W++ GC +++FH RLL T+ P+ L+ L+GTY +V E+L I KHVS+ +L+ FL+YSS S+ +F+ F CE L+DG YLRADYTI CD +H+ +YAGFMV +Y +GIPA +A+LL + RH L D D + + S LWK YK S FYYE+IECGRR+ LAGV++ + N+ QI ITLM+AF F ++SEGLAP+ S+ DAW+NR GH VF S+Y ALLLKV+ E ++ ++L+A H MILAV+ E V +Q ++P RFR + + + R
Sbjct: 553 STLVMNGTTAFVNNTCGANGGALALLGGLAVNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGCETACDGCFFEPP-VPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVMTETFVLTWSLKVEQRQEPTTRFRHGKLFRSGR 1258
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 556 bits (1434), Expect = 3.450e-175 Identity = 310/693 (44.73%), Postives = 425/693 (61.33%), Query Frame = 1
Query: 427 ALSSSTSINPGIDKSSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYL----DEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDD-CDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVSE-DLATGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLV-DQAGDHDSPSMMLISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV 2484
+++S + ++P + S+L I G +A+LGGLS+ +T+F++N A +AGGAV +S T GP F++ F SNSA+VGG + G+G D+ L TF C F NRA ATGGA++SA+G + +T F N+A GGALRL G SL D G A+S +G I E+ N FS N ++C TFLN + G+ + ACSGC CD CV V CS V+ HS S GG VTL T+SI+ GYWRATNSST ++ACYN AC GG+TG+ +C EGY GPYCA+C++ Y + F+C+KC + GG++ A LA + + V YV D TG + L R +PL+++K+++ AWQI+TQF + ANV YP +YQ FLN DV NFD +W++ GC ++++FH RLL+ TI PI AL+ L+ TY TL + +HVS+ +L++FLVYS SSV+FQ F C+ L+ G YLRADY I CD +H+ +YAGFM+ LYP+GIPAF+ LLL+ R L D G D P + IS LW+ Y+ S +YYE+IECGRRI L G+++ + N+ QI ITL++ VF V+SE L PY D WV+R+ HA VF S+Y ALLLKV+ E S +F +L+A H MILAV+ E I+
Sbjct: 305 SVASDSVLSP--EDSTLSIDGPTAFVNNTSGENGGALALLGGLSISVNTGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTS-GDALDEACSGCQTTCDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMAGHLKRYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAVVVETIL 992
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 572 bits (1473), Expect = 6.280e-175 Identity = 322/711 (45.29%), Postives = 424/711 (59.63%), Query Frame = 1
Query: 460 IDKSSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFE-MNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTY-----LDEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDD-CDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVS-EDLATGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLV--DQAGDHDSPSMMLISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV------ARNFNDQ--VEDPRPRFRSA 2538
++ S++LI G V +LG ++ F N A VAGGAV +S G GP F N TF SNSA+VGG + + G+G ++ TF+ C F+ NRA ATGGAI+SA G +T F N A GGALRL G S+ D +GG A+S IG + EN FS N +DC SGTFL + + FEA C+GC C C + V TC+ ++EHSTS G TL T+SI+ GYWRAT S T ++ACY+ AC GGVTG+ +C EGY GPYCA+C+ Y + F+C CSDN GG+ A LA ++++ V YV S E G+GI R+ R +PL+SVK+++ AWQI+TQF VANV YP +YQ FLN +V NFD +WM+ GC ++V+FH RLL+ TI PIFA +LL TY +V ETL +R KHV + +L+ F VYSS S+ +F+ F CE L+DG+TYL ADY I CD +H+ +YAGFMV LY GIPA +++LL + R L + AG S LWK YK S FYYE++EC RR+ LAGV++ + NS QI ITL++AF F +ISEGLAPY SR D W+NR+GH V S+Y ALLLKV+ E S +F +L+ HV M++ + E +V A DQ ED PRFRS+
Sbjct: 903 LENSAILINGTTSFFNNACGGNGGAVTLLGACDLVVNPAASVRFTENAAAVAGGAVFVSGAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFLGYNASADLFEAVCNGCQTACVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYEGPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLVLLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCVVDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRGATETLENVRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVVXVAETLVLALALRAERRRDQHLQEDRLPRFRSS 1613
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 561 bits (1445), Expect = 4.850e-172 Identity = 317/723 (43.85%), Postives = 435/723 (60.17%), Query Frame = 1
Query: 409 GAVSSRALSSSTSINPGIDKSSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYLDEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDD-CDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDN-VGGLVAAVILATFVVIVIFVAVEYVVSEDLATGQ--GITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLVDQAGDHDSPSMML-ISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIVA----RNFNDQVEDPRPRFRSARSWT 2550
GAV++ ALS+S SI L I G +A+ +++ D +F+ N A VAG A+ +S+ GP F I I G+GT L TFD C FI N+A +TGGAI SA G + + F N A GGALRL G ++ D G A+S IG+I + N F N +DC +GTF N +G + FEA C+GC+ CD CV C+ VM+HSTS GG+VTL T+SI+ G+WRA+ SST ++ACY+ AC GGVTG+ +C EGY GPYC +C++ Y E+ F+C+KCS+N GG+ AV+LA +V + V YV S ++ G+ GI + R +PL+S+K++I +WQILTQF +VANV YP +YQ L+ DV NFD +W++ GC +++NFHGRLL+ TI PI AL+LL+ TY + E L I KHV+V +L+ F VYSS SS +F+ F C+ LD + YLRADY+I C+ HR + +YAGFM+ +Y +GIPA +A LL +SR L D+ D + P + IS LW+ YK + FYYE+IEC RR+ LAGV++ + N+ QI +TL++AF F ++SEGLAPY SR D W++R+GH VF S+Y ALLLKV+ E S +F +L+A+HV MIL VL EA V R + PRFRS +S T
Sbjct: 799 GAVATNALSTSNSI--------LFINGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVSFLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEAAVQAWSLREERRSLSAASPRFRSGKSLT 1513
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 535 bits (1379), Expect = 3.700e-167 Identity = 295/657 (44.90%), Postives = 392/657 (59.67%), Query Frame = 1
Query: 535 VAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYLDEG----LSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCD-DCDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVS-EDLATGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLVDQAGDHDSPSMML-ISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV 2484
+A+LGGLSV +T F+ N A VAGGA+ +S T GP F N + SNSA+VGG I + G+GT + TF+ C F NRA ATGGA+++A G + F N A GGALRL G + D GG A+S IG++ + N FS N Y C G FL G +EA C GC +C+ C E V CS +EHS S GG+VTL + IE GYWRAT SS N++ CYN AC GGVTGS +C EGY GPYCAVC+ Y R +C+KCSD G + V ++ ++ V Y VS E +G+ R R VPL+SVK++I AWQILTQF +VAN+ +P +YQ FL+A ++ NFD W++ GC +V+FH RLL+ TI PI L+ L+ Y + + E L + KHVS+ +L+ FLVY+S S+V+FQ F CE LDD + YLRADY I CD P+H +YAGFM+ LY +GIPA + L + L D + + + + LWK Y+ S FYYE+IEC RR+ LAGV++ + N+ QI + L++A VF +ISE LAPY SR D W+ R+GHA V S+Y ALLLKV+ E S +F +L+A HV M+ VL E I+
Sbjct: 296 LALLGGLSVTIGTENTVFVGNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSGESEGRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQRVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVLLEVIM 952
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 527 bits (1358), Expect = 2.570e-160 Identity = 303/680 (44.56%), Postives = 407/680 (59.85%), Query Frame = 1
Query: 466 KSSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGT---YLDEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGN-RFEAACSGCD-DCDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVSEDLATGQG-ITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLV-DQAGDHDSPSMMLISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV 2484
+SSL+I G +A+ S+ D +F N A AGGAV +S G GP F++ +F SN A+VGG + G+G L + FD C FI+N A +GGA++SA G +V + F N A +GGALRL G XXXXXXX G A+S IG + M N F+ N + C FL N FEA C GC CD C + V TCS VM+H TS GG VTL T+SI+ GYWRAT+SS I+ CYN AC GGVTG+ +C E Y GPYC++C++ Y +SC+KC GG+V AV +A + V V + Y++S + + + RL VPL+SVK++I +WQILTQFA+ ANV YPG+YQ FL+ V FD W++ GC +++ FHGRLL TI PIFA++LL+GTY + E L I KHV V +L+ FLVYSS SS +F+ F C+ L+DG+ YLR DY I CD +H+ +YAGFM+ LYPLGIP ++ LL + R L D+A DS + S LW+ YK S FYYE+IECGRRI L G+++ + N+ Q+ ITLM+AF F ++SE ++PY SR + WVNR+GH V S+Y ALLLKV+ E ++F +L+ +H MIL+V+ E V
Sbjct: 723 ESSLVINGTTTFFNNTCGENGGSLALFDACSLDINTADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFAQVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGALRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGCRVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIMYIMSGEAGERRMYVLERLGWYVPLQSVKIVIVSWQILTQFASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPIFAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVHACMILSVVVETFV 1402
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 528 bits (1361), Expect = 3.420e-159 Identity = 288/643 (44.79%), Postives = 400/643 (62.21%), Query Frame = 1
Query: 577 DTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYLDEGLS-ATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNE-SGPGNRFEAACSGCD-DCDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSD-NVGGLVAAVILATFVVIVIFVAVEYVVS--EDLATGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLV-DQAGDHDSPSMMLISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV 2484
D +F+ N A VAGGA+ +S GPIFT F SN A++GG + + G G G + TFD C F++N+ +TGGAIESA G + F N A GGALRL GA D G A+S IGYI +E+ FS N +DC S +L+ + FE CSGC+ C+ CV + V C+ VMEH+TS GG++TL +SI+ GYWRAT SS +++ACY+ AC GGVT + +C EGY GPYC+VC+N Y E+ F C+KC + N GG+V V+LA IV+ YV S + + TG G R+ R +PL+SVK++IAAWQILTQF ++ANV YP +Y+ FL D+ NFD W + C I+++FH RLL+ TI PI AL+ L+ TY + +TL ++ KH S+ +L+ F VYSS SS++F+ F CE L D + YLR+DY I CD +H+ +YA FM+ +Y +GIPA +A LL + R L D + D P + I+ LW+ Y R FYYE+IECGRR+ LAGV++ + N+ QI +TLM+AF F V+SE L PY S D W+NR+GH VF+S++ LLLKVN E + +F ++L+A+H M++A++ E +V
Sbjct: 956 DISFVGNSAGVAGGAIFLSGVDTGPIFTEVNFTSNVAEIGGAVSLFGCGIEPSGGDNPTTFDRCRFVDNQGASTGGAIESAAGKDAFNGSIFEGNSAGTGGALRLAGAAYFFNCSFVGNTADEGEGAAVSNIGYISAVESNFFSGNRFDCRSSMYLDFIQQSDDPFEVMCSGCEVTCEGCVFDEGLLVPACTEVMEHATSDGGNITLEALSIDSGYWRATESSEDVLACYHAEACLGGVTATSGYCLEGYEGPYCSVCSNGYSEQLGFVCSKCPEKNTGGIVILVVLAVGTTIVLAAIYSYVTSGEDGMGTGCGWIERVTRYIPLQSVKIVIAAWQILTQFTSIANVTYPDVYEDFLGVLDMFNFDLGWALSVSCTIDMDFHDRLLVSTISPIAALLFLACTYFRAWSLYRRKPDTLGAVQHKHASMVLLLTFFVYSSVSSILFRSFACEELADRKIYLRSDYRIECDSSKHKGFQVYAVFMILVYTVGIPALYAGLLFRDRDLLKQDTSKRRDPPRVTSIADLWEPYNRWAFYYEVIECGRRVLLAGVVVFIYPNTAAQIAVTLMIAFAFVVVSEALNPYKSGWDRWINRMGHVVVFSSMFLGLLLKVNVSDEHVASQRVFEIVLVAVHALMVMAIVVETVV 1598
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 521 bits (1342), Expect = 5.680e-154 Identity = 289/656 (44.05%), Postives = 394/656 (60.06%), Query Frame = 1
Query: 547 GGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTYLD-EGLS----ATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCD---DCDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVSEDLATG-QGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLVDQAGDHDSPSMML-ISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAIV 2484
GGL V F F NN A VAGGAV +S GP+ ++ F +N A+VGG + G+G + GL+ F C F+ N+A ATGGA+E+A G V + F GGALRL G +L + GG A+S IG I +M+N + N + C G FL+ + G+ EAAC GC D D C E V C+ MEH+ S GG+ + + +++G+WRAT + +++ CYN AC GVT S C +GY GPYC++C++ Y F C++CSD+ GG++ A LA ++V V YVVS+ + G +G RL R +PL+S K+++ +WQILTQF VANV YP +YQ FL+ V NFD +W++ GC + V+FH RLLI TI PI AL+ L TY + ETL I +HVS+ +L+ VYSS SS +FQ F CE L DG+TYLRADY ITCD +H+ L +YAG MV +Y +GIPA + LL + R L D + + ++ S LWK YK S FYYE+IECGRR+ LAGV++ + N+ QI ITL++AF F V+SEGLAPY SR D W++R+GHA VF S+Y ALLLKV+ E +F V+L+A H MIL ++ E +V
Sbjct: 1388 GGLHVEFGAAGVVFSNNTAAVAGGAVFVSGADVGPVLSDVLFEANVAQVGGAVSTVGSGNLKEYAGLAPPNPTIFTRCRFVNNQAAATGGAVETAAGQDVFVDCLFXXXXXGTGGALRLAGTATLENCSFVENVSEDGGGAAVSNIGSISKMDNISYRGNVFSCALGMFLDFNASGDPNEAACDGCQTPCDDDGCF-EEPPLVPICALAMEHTGSAGGTNNITLLRVDDGFWRATPYAIDVLPCYNANACLAGVTNSSGSCLDGYEGPYCSICSDGYTAGLSFKCSECSDSAGGIILASFLAVVALLVAVAVVSYVVSDKVGEGSRGTVERLGRYIPLQSAKIVVVSWQILTQFTAVANVTYPDVYQRFLDGLGVFNFDLSWVLSAGCIVVVDFHDRLLISTIGPIVALLFLCWTYAAATRINRGATETLQVIWNRHVSMVLLLTVFVYSSVSSTLFQTFACESLADGETYLRADYRITCDSSKHKALQVYAGVMVVVYTVGIPALYGVLLFRDRDVLKRSGADREETARVISTSELWKPYKPSVFYYEVIECGRRVLLAGVVVFIYPNTAPQIAITLLMAFAFVVVSEGLAPYASRWDTWLSRMGHAVVFVSMYVALLLKVDVSNERVESQRVFEVVLVAAHACMILVIVIETVV 2042
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D8LIY0_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY0_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 9.180e-151 Identity = 287/668 (42.96%), Postives = 394/668 (58.98%), Query Frame = 1
Query: 409 GAVSSRALSSSTSINPGIDKSSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMN-DTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTY-----LDEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDDCDTCVV-ENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDNVGGLVAAVILATFVVIVIFVAVEYVVS-EDLATGQGITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSV-CRPGATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNLVDQAGDHDSPSMMLIS--GLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLK 2379
GA+ S L S NP +S+L G +A+ GG +++ + +FI N A V+GGAV +S+ G G F +F SNSA++GG + G+G ++ TFD C F+ NRA ATGGAI++A G +T F N A GGALRL G S+ + GG A+S IG + E FS N +DC +G FL + + FE C GC V C ++EHSTS G +TL +SI+ GYWRAT +S ++ACY+ AC GGVTG+ +C EGY GPYCAVC++ + + F+C +CSD+ GG+V AV LA + V V YV S + GQGI R+ +PL+SVK+++ AWQ++TQF VAN+ YP +YQTFL+ + NFD W++ GC +V+FH RLL+ TI PI A+++L+ TY + GAT+ TL + KHV V +L+ F VYSS SS +F+ F CE L DG+ YLRADY I CD RH+ +YAG M+ +Y +GIP + +LL + R L ++ + P + S LWK Y+ S FYYE+IECGRR+ LAGV++ + NS QI ITL++AFVF +ISE L+PY SR D W++R GH V TS+Y ALLLK
Sbjct: 699 GAIVSPQLDSE--YNP--SESTLNFNGTTTFFNNRCGGNGGGMALYGGCALVIDTEMGISFIENTAAVSGGAVFVSSAGTGLAFPTTSFVSNSAQIGGAVATFGSGGSKGVEDIEPPNPTTFDRCRFVGNRATATGGAIDTAAGYDFFVDTTFEDNAAGTGGALRLAGTASIINCSFVENYSNDGGGAAVSNIGIVSSAEKINFSGNGFDCPTGMFLAYNESDDLFETVCDGCQTXXXXXAFAEPLLVPMCRDLLEHSTSPDGKLTLEALSIQRGYWRATTTSEEVLACYHPEACLGGVTGTAGYCLEGYQGPYCAVCSHGFSAQFGFTCRECSDSAGGIVLAVALAVAGIFAAVVVVSYVTSGKRNGRGQGIVERVALYIPLQSVKIVVVAWQVVTQFTVVANITYPDVYQTFLDGLKLFNFDLGWILSAGCVTDVDFHDRLLMSTIGPIIAVMVLACTYAAATRIHRGATDTTLQNVWDKHVLVVLLLSFFVYSSVSSTLFRTFACETLGDGKNYLRADYRIECDSSRHKGFEVYAGIMMLVYTVGIPGLYGFLLYRDRDFLKERDTCQEPPPSRVTSTSDLWKPYRPSVFYYEVIECGRRVLLAGVVVFIYPNSGAQIAITLVIAFVFVLISESLSPYASRWDTWISRTGHVVVVTSMYVALLLK 1362
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 494 bits (1271), Expect = 1.590e-149 Identity = 296/701 (42.23%), Postives = 391/701 (55.78%), Query Frame = 1
Query: 469 SSLLIKGXXXXXXXXXXXXXXXVAILGGLSVLFEMNDTTFINNKAKVAGGAVSISATGEGPIFTNATFRSNSAKVGGGIFITGTGTY-----LDEGLSATFDGCMFIENRADATGGAIESATGAVVVRETNFTSNKATMGGALRLTGATSLTXXXXXXXXXDLDGGQAISMIGYILEMENCLFSDNTYDCNSGTFLNESGPGNRFEAACSGCDD-CDTCVVENSGTVSTCSAVMEHSTSIGGSVTLMTISIEEGYWRATNSSTNIVACYNELACSGGVTGSLIFCAEGYTGPYCAVCTNHYVERPMFSCTKCSDN-VGGLVAAVILATFVVIVIFVAVEYVVSEDLATGQ--GITTRLLRRVPLESVKVIIAAWQILTQFATVANVHYPGIYQTFLNAADVLNFDPTWMVLEGCFINVNFHGRLLIVTIWPIFALILLSGTYTCSVCRP--GATEETLTTIRRKHVSVAILILFLVYSSASSVIFQMFDCEVLDDGQTYLRADYTITCDGPRHRTLMIYAGFMVFLYPLGIPAFFAYLLLQSRHNL-VDQAGDHDSPSMMLISGLWKQYKRSRFYYEIIECGRRITLAGVLLNVLGNSVTQITITLMLAFVFTVISEGLAPYVSRTDAWVNRLGHAAVFTSIYYALLLKVNGYYETHSRGNLFGVILIAIHVAMILAVLFEAI---VARNFNDQVEDPRPR 2526
S+LLI G +A GLSV + TF N A+VAGGAV +S G G +F + I G+G L+ TFD C F+ N+A ATGGA ESA G F NKA GGALR+ G S+ D G A+S IG+I +M + FSDN +DC SGTFL+ + G+ FEA C+GCD CD CV E CS VM HSTS GG+ TL +SI+ GYWRAT+ S ++ C+ AC GGVTG+ +C EGY GPYC++C+ Y ++ FSCTKCS+N GG+V Y++S D G G+ R+ R +PL+SVK++I +WQILTQF +VANV YP +YQ FL+A DV NFD +W+ GC +++FH RLL+ TI P+ AL L+ T +V R G+ + + +KHVS+ +L+ FLVYS+ SSV+FQ F CE L DG+ YLR+DY I CD H+ +YAGFM+ LYP+GIPA +A LL + R L D+ D P + S LW+ YK S FYYEI +TL++A FT++SE L PY SR DAW +R+GH V S+Y ALLLKV+ E S +F IL+A+H M+ V+ E I V+ + E PRPR
Sbjct: 523 STLLINGPTAFVNNTCGGSGGGLAAFDGLSVDIDTAGVTFSGNAAEVAGGAVFVSGAGVGFVFXXXXXXXXXXXXXXAVSIVGSGNLKGFFDLEWPSPTTFDRCSFVGNQASATGGAFESAAGQDAFVGNVFVGNKAGTGGALRMAGTASVENCSFVDNVSDDGEGAALSNIGFISKMAHIYFSDNVFDCPSGTFLDLNASGDPFEAVCAGCDIVCDGCVFEQGLVGPACSEVMAHSTSTGGNTTLQEVSIDRGYWRATSVSEEVLECFQADACLGGVTGTSGYCLEGYEGPYCSICSGGYTKQLGFSCTKCSENKAGGIVVXXXXXXXXXXXXXXXXSYIMSRDDDGGAEGGLVERMARHIPLQSVKIVIVSWQILTQFTSVANVTYPDVYQDFLDAMDVFNFDLSWVFSTGCIFDIDFHDRLLVSTISPLVALSFLACT-NAAVARTNRGSPQNLQNNVWQKHVSMGLLLTFLVYSNVSSVLFQSFACEELHDGKNYLRSDYRIECDSSGHKAFQVYAGFMIVLYPVGIPALYAGLLFRDRDVLRKDEINREDPPRVTSTSHLWEPYKPSAFYYEI------------------------AVTLVIAVAFTILSEALDPYSSRWDAWTSRMGHMVVLVSMYVALLLKVDVSDERASSQRVFEAILVAVHACMVTLVVVETIILSVSLRAAKEREAPRPR 1198 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5346.12689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig5346.12689.1 >prot_H-elongata_contig5346.12689.1 ID=prot_H-elongata_contig5346.12689.1|Name=mRNA_H-elongata_contig5346.12689.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=837bp MGNATFNGNHANIDNGGALYLESRSNASWSTTATFVDNDASYEGGAIFVNback to top mRNA from alignment at H-elongata_contig5346:3305..8431+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig5346.12689.1 ID=mRNA_H-elongata_contig5346.12689.1|Name=mRNA_H-elongata_contig5346.12689.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5127bp|location=Sequence derived from alignment at H-elongata_contig5346:3305..8431+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig5346:3305..8431+ >mRNA_H-elongata_contig5346.12689.1 ID=mRNA_H-elongata_contig5346.12689.1|Name=mRNA_H-elongata_contig5346.12689.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5022bp|location=Sequence derived from alignment at H-elongata_contig5346:3305..8431+ (Himanthalia elongata Himel1 dioecious)back to top |