prot_H-elongata_contig53437.12686.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53437.12686.1
Unique Nameprot_H-elongata_contig53437.12686.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length175
Homology
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: D7G0Z4_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z4_ECTSI)

HSP 1 Score: 252 bits (643), Expect = 5.380e-82
Identity = 123/171 (71.93%), Postives = 150/171 (87.72%), Query Frame = 0
Query:    6 QVIENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIG-GDGGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQKKF 175
            +++E+SGGFRTF S+V GS+ L LRGET V EHIGRLYTAFLNTTSTLDWVRFLVEVEELP +   ++ G GDG V+FQ+Y MPWPVKDREVV+RRS+RLDK++KK+IA+Y+ST+HPARP+TS  +RA+V+RTSW+L SLG SKT+IEFETR DPKGSLP A+VGF+Q KF
Sbjct:   67 ELVEDSGGFRTFSSRVQGSSSLALRGETTVDEHIGRLYTAFLNTTSTLDWVRFLVEVEELPTQASSRRGGSGDGDVLFQKYDMPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVYRTSWILTSLGSSKTSIEFETRTDPKGSLPSAMVGFLQVKF 237          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A6H5L2R4_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R4_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 9.650e-43
Identity = 69/89 (77.53%), Postives = 83/89 (93.26%), Query Frame = 0
Query:   87 MPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQKKF 175
            MPWPVKDREVV+RRS+RLDK++KK+IA+Y+ST+HPARP+TS  +RA+VHRTSWVL SLGGSKT+IEFETR DPKGSLP A++GFMQ KF
Sbjct:    1 MPWPVKDREVVIRRSVRLDKRAKKMIASYQSTDHPARPITSATVRAIVHRTSWVLTSLGGSKTSIEFETRTDPKGSLPSAMIGFMQVKF 89          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A2E2NRS4_9DELT (START domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E2NRS4_9DELT)

HSP 1 Score: 90.9 bits (224), Expect = 1.060e-19
Identity = 52/153 (33.99%), Postives = 78/153 (50.98%), Query Frame = 0
Query:   21 VPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQK 173
            VPGS L   RGE V    IG+L T         +WV  ++E + + V      +  D  +I++ YG+PWP+ DR+ V+  ++  D   K     Y+S E  A P     +RAV  +T W L  +  ++T IE E   DPKG+LP  ++  +QK
Sbjct:   13 VPGSPLFAFRGEGVFDLPIGKLVTVLKAAEIASEWVDLMLEHKVVRV------VEPDKNLIYESYGLPWPIDDRDYVMYETMGYDAAQKVFTIDYKSVEDTALPPKKGFVRAVAFQTYWRLEKISDTQTKIEVEVHTDPKGALPAWLINLIQK 159          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A2E8I5A3_9PROT (START domain-containing protein n=1 Tax=Bdellovibrionaceae bacterium TaxID=2026715 RepID=A0A2E8I5A3_9PROT)

HSP 1 Score: 80.1 bits (196), Expect = 3.340e-15
Identity = 49/156 (31.41%), Postives = 85/156 (54.49%), Query Frame = 0
Query:   21 VPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGD-GGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQKKF 175
            VPGS+LL ++G T ++  I +++T  ++     +WV  L+ +  L      K++ G    +      MPWPVKDR+ V+R  +  D  ++ +IA+  ++     P     IRA  H ++  L ++  ++T IE   R DPKGSLP+ +V + QK++
Sbjct:   47 VPGSDLLLVKGTTTLNHSIEKIFTLAIDHQLRKEWVDRLIHIRRL------KEVDGKLDAIAHYVVDMPWPVKDRDFVIRTRITFDPATE-IIASESASIPGFMPEQDNIIRATSHNSTVKLKAINPTETRIEVTARIDPKGSLPIFLVNYFQKRW 195          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A5C6UNU6_9DELT (START domain-containing protein n=6 Tax=Bradymonadales TaxID=1779134 RepID=A0A5C6UNU6_9DELT)

HSP 1 Score: 77.0 bits (188), Expect = 4.890e-14
Identity = 54/175 (30.86%), Postives = 85/175 (48.57%), Query Frame = 0
Query:    3 GGAQVIENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRY----GMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQK 173
            G  + + +S G      +V GS++   RGE V   HIG++ T F +      WV    E   L           D G + +RY    G+P+P+KDR+ VL+ + RL++  +  IAT  S +   RP     +RA+ + T +   +L G +T +  E   DPKG LP  +V  +Q+
Sbjct:   38 GNWEALGDSDGVAISRMQVEGSSVFAFRGEIVADVHIGKILTVFADGDQRRHWVDRYDEHGTL-----------DRGELSERYWIRFGLPFPIKDRDYVLQTNGRLNQDDQVFIATIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPNWLVNRIQR 201          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A328C4Z6_9DELT (START domain-containing protein n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328C4Z6_9DELT)

HSP 1 Score: 75.9 bits (185), Expect = 1.090e-13
Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 0
Query:   20 KVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRY----GMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQK 173
            +V GS++   RGE V   HIG+L T F +      WV    E   L           + G + +RY    G+P+P+KDR+ VL+   RLD+ ++  +A+  S +   RP     +RA+ + T +   +L G +T +  E   DPKG LP  +V  +Q+
Sbjct:   43 QVEGSSVFAFRGEIVADVHIGKLLTVFADGNQRRHWVDRYDEHGTL-----------ERGELSERYWIRFGLPFPIKDRDYVLQTEGRLDQANQVFVASIESVDDARRPENDCCVRAMTYSTYYRFEALEGERTRMIVEVHTDPKGLLPDWLVNRIQR 189          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A3C1KYH3_9DELT (START domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3C1KYH3_9DELT)

HSP 1 Score: 75.1 bits (183), Expect = 3.930e-13
Identity = 49/171 (28.65%), Postives = 79/171 (46.20%), Query Frame = 0
Query:    6 QVIENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASL-GGSKTAIEFETRADPKGSLPVAIVGFMQKKF 175
            ++I  + G + +  +V GSN+   +G    + H  R+   F  +     WV      ++L V    ++        + R+G+PWPV DR+ VL     LD K + + A  RS   P     S  +R  V  T +   +L G  KT +  E + DP+G LP  +V  +QKK+
Sbjct:   45 ELISTADGVKVYRKEVKGSNMFAFKGVMTANVHFARVARVFSTSKLRRTWVDRWAADKDLKVHNSKERT------YYIRFGLPWPVSDRDYVLNTKATLDVKRRIMTARIRSVNFPGYGPKSCCVRGKVVGTFYKFEALPGAEKTRLTVEVQTDPRGLLPAWLVNLIQKKW 209          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A7S4E3Y4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E3Y4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.910e-9
Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0
Query:   24 SNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGV-IFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLP 164
            S L  + GE VV   +  L + F +      W   LV+  E          G DGG  ++QR+  PWPV+DRE+VLRR  R  ++++ V   + S +    PV   A+R + H   W   ++  ++T I   +  DP G++P
Sbjct:   46 SQLCAVHGEAVVEASVAELMSVFGDLDQHGHWDATLVDAREW--------TGADGGTYVYQRFKQPWPVRDRELVLRR--REWRRNQTVSVHFESVDE-GTPVAPGAVRTLAHTVWWNFTAVSETETLISHYSCVDPGGAIP 176          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A2E5HIH6_9DELT (START domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HIH6_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 3.530e-8
Identity = 37/157 (23.57%), Postives = 69/157 (43.95%), Query Frame = 0
Query:    8 IENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLP 164
            I    G   F  ++ G ++   RG  VV   +  +     +     +W+    E   L      K+I     + + R   PWPV DR+VVLR  + +D+  K++   +R  + P +P     +R    +  + L ++  + T ++++  +DP G LP
Sbjct:   37 INKEEGIEVFRKEIAGRDMPMFRGRAVVKADLYTVLAVLSDFDRHTEWMHSCFEAGLL------KEIDDLNRLSYNRADAPWPVSDRDVVLRSKVEIDRDKKRITIHFRGVKSPLKPEVEDVVRMKRLKGYYQLTAIDANTTRVQYQVDSDPGGDLP 187          
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Match: A0A2E4Y7D9_9PROT (START domain-containing protein n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E4Y7D9_9PROT)

HSP 1 Score: 61.6 bits (148), Expect = 3.670e-8
Identity = 43/176 (24.43%), Postives = 82/176 (46.59%), Query Frame = 0
Query:    4 GAQVIENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTTSTLDWVRFL----VEVEELPVEGGGKKIGGDGGVIFQRYGMPWPVKDREVVLRRSLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTAIEFETRADPKGSLPVAIVGFMQKKF 175
            G + I+   G   F  K+ GS + +  G+  ++  + +++   ++     +WV  L    V  E+ P +           V++Q +G+PWPV +R+ V       D+  + V     S    + P T   +RA +H++ ++L  LG  KT +E    +DPKG +P  +   +Q+ +
Sbjct:   89 GWKQIKEDKGITVFAQKMDGSPVFSFGGKVTLNTSVEKVFNVLMDKRYRKEWVDRLKISKVLSEKTPYD----------YVLYQEFGLPWPVSNRDFVYHGKAYKDELGR-VHLEMTSVPSKSAPKTK-GVRAHLHKSFYILTDLGNGKTQVEVGINSDPKGLIPGWLANLIQRSW 252          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53437.12686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G0Z4_ECTSI5.380e-8271.93START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2R4_9PHAE9.650e-4377.53START domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A2E2NRS4_9DELT1.060e-1933.99START domain-containing protein n=1 Tax=Deltaprote... [more]
A0A2E8I5A3_9PROT3.340e-1531.41START domain-containing protein n=1 Tax=Bdellovibr... [more]
A0A5C6UNU6_9DELT4.890e-1430.86START domain-containing protein n=6 Tax=Bradymonad... [more]
A0A328C4Z6_9DELT1.090e-1331.65START domain-containing protein n=1 Tax=Lujinxingi... [more]
A0A3C1KYH3_9DELT3.930e-1328.65START domain-containing protein n=1 Tax=Myxococcal... [more]
A0A7S4E3Y4_9STRA2.910e-930.99Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2E5HIH6_9DELT3.530e-823.57START domain-containing protein n=1 Tax=Myxococcal... [more]
A0A2E4Y7D9_9PROT3.670e-824.43START domain-containing protein n=1 Tax=Halobacter... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023393START-like domain superfamilyGENE3D3.30.530.20coord: 6..175
e-value: 5.6E-24
score: 86.4
IPR002913START domainPFAMPF01852STARTcoord: 78..167
e-value: 9.4E-6
score: 25.2
IPR002913START domainPROSITEPS50848STARTcoord: 42..175
score: 13.234
NoneNo IPR availablePANTHERPTHR19308:SF14coord: 74..168
NoneNo IPR availablePANTHERPTHR19308PHOSPHATIDYLCHOLINE TRANSFER PROTEINcoord: 74..168
NoneNo IPR availableSUPERFAMILY55961Bet v1-likecoord: 10..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53437contigH-elongata_contig53437:2964..3950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53437.12686.1mRNA_H-elongata_contig53437.12686.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53437 2964..3950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53437.12686.1 ID=prot_H-elongata_contig53437.12686.1|Name=mRNA_H-elongata_contig53437.12686.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=175bp
MDGGAQVIENSGGFRTFVSKVPGSNLLTLRGETVVHEHIGRLYTAFLNTT
STLDWVRFLVEVEELPVEGGGKKIGGDGGVIFQRYGMPWPVKDREVVLRR
SLRLDKKSKKVIATYRSTEHPARPVTSTAIRAVVHRTSWVLASLGGSKTA
IEFETRADPKGSLPVAIVGFMQKKF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR002913START_lipid-bd_dom