mRNA_H-elongata_contig53356.12678.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig53356.12678.1
Unique Name	mRNA_H-elongata_contig53356.12678.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A086Q4G9_TOXGO (Ankyrin repeat-containing protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=A0A086Q4G9_TOXGO)

HSP 1 Score: 75.5 bits (184), Expect = 4.840e-11
Identity = 55/171 (32.16%), Postives = 78/171 (45.61%), Query Frame = 3

Query:  159 EDWNNFLGQGLLGAASVGDLEGAKELISAGANELSRDFYGRTPLHRAARAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAGADV 671
            ED      + LL A S+ D E A  LI  GA+    D    TPL  AA  G++++V +L+        LS  H P   E    KA    + +      +  + V     Y PLH AA +GH R+VWLL++ G  P V++    T LH AA    G +   +  ++  G DV
Sbjct:   21 EDRQALRNERLLEACSLNDTEVAIRLIDDGADCCYEDDKQWTPLQWAATNGNLELVRKLLAEGAADMYLSPLHGPAVAEELHKKASRGNLPDHRIYPCESAIRVYKPKRYTPLHWAAFKGHLRIVWLLIKAGLSPHVKDILGNTVLHQAAA---GGDVATVKTILSLGVDV 188

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A7S2DW92_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2DW92_9DINO)

HSP 1 Score: 64.7 bits (156), Expect = 4.330e-9
Identity = 39/98 (39.80%), Postives = 56/98 (57.14%), Query Frame = 3

Query:  462 VNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAGADVMAGDXXXXXXXXFAASSAGTEEAISALV 755
            V+ RD  G  PLHLAA  GH  V   LL H A+PG  + S + PLH+AA+     +  ++HLL+ A A+V+AGD        +AA++ G  E +  L+
Sbjct:    3 VDSRDGAGELPLHLAAAAGHEEVARWLLGHHADPGAASLSGRPPLHAAAK----GHARLVHLLLRAKAEVLAGDSEGVQAVHWAAAN-GLPEVMELLL 95

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A6H5HW80_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5HW80_9HYME)

HSP 1 Score: 71.2 bits (173), Expect = 5.990e-9
Identity = 55/192 (28.65%), Postives = 85/192 (44.27%), Query Frame = 3

Query:  276 GRTPLHRAA----RAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTN-TEIIHLL---VEAGADVMAGDXXXXXXXXFAASSAGTEEAISALVRAGAKPGATGRIGRRTPLHEACAR 827
            G TPLH A     R G   ++ +   PN V     +   P  +  Q +       +    + H  +++V+DE G+ PLHLA   GH  +  +LLR GA P +      TPLH  +RC +  +  E+   +   ++   ++ A D         A    G E ++ +L+R G  P    + G  TPLHE C R
Sbjct:  304 GWTPLHVAVMGDLRKGTEFLLRRGANPNAVNPL--QGRTPLHIICQWNHQAKIFFEICDDMQHTIQIDVQDEKGWTPLHLALFGGHRELAEMLLRRGANPNLATEEGLTPLHVISRCNIDDDIVEVFFKICDEIQQALEINALDNMGNTSLHLALRK-GNEMSVESLLRRGVDPNIANKEGS-TPLHEICLR 491

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: UPI000C71A9D4 (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71A9D4)

HSP 1 Score: 70.5 bits (171), Expect = 1.030e-8
Identity = 44/117 (37.61%), Postives = 57/117 (48.72%), Query Frame = 3

Query:  273 YGRTPLHRAARAGHVDVVSQLVRPNEVTS-----QLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAA 608
            YGRTPLH   + G       L+R    T+      ++  H+ CR    +     F + N    + +  +NVRDE+G  PLHLA E GH  V   LLRHGA+P   N    TPLH  A
Sbjct:  259 YGRTPLHWLLKRGFTTTAELLLRRGADTNVADIKSVTPLHIICRDGHYNLLQLYFSMKNDDEEMWR--INVRDESGNTPLHLALERGHRAVAQSLLRHGADPHPGNARGATPLHLIA 373

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: UPI001EE4FC66 (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like isoform X2 n=2 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4FC66)

HSP 1 Score: 67.0 bits (162), Expect = 2.590e-8
Identity = 78/253 (30.83%), Postives = 115/253 (45.45%), Query Frame = 3

Query:  177 LGQGLLGAASVGD-LEGAKELISAGANEL-SRDFYGRTPLHRAARAGHVDVVSQLVRPN---EVTSQLSER--HVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNV--RDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAG-ADVMAGDXXXXXXXXFAASSAGTEEAISALVRAGAKPGATGRIGRRTPLHEACARLRPRNVERLLELG-ADERALDSDERT 902
            LG+ +L AA + D ++  + L+S G  ++ S+D  GRTP+  AA  G+  VV  LV       V   L     H  C          S  VD    LL +   ++  +D+NG  P+  AAE+GH +VV LL+  G    V +   +  LH+A   CL  N +I+  L+  G  D+ + D        +AA   G ++ +  LV  G        +GR   LH AC       VE +L  G AD    DS+ +T
Sbjct:   26 LGRNILHAACLSDNVDVVEYLLSRGIADIESKDKTGRTPVMYAAEQGNKKVVDLLVSKGCNLSVVDDLGRNILHAACL---------SDNVDLVEDLLSRGIADIESKDKNGATPVMYAAEQGHKKVVDLLVSKGCNLSVVDDLGRNILHAA---CLSDNVDIVEDLLRHGIVDIESKDKNGATPVMYAAEQ-GNKKVVDLLVSKGCNLSVVDDLGRNI-LHAACLGDNVGIVEYILSRGIADIYNRDSNGKT 264

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: T1G1I9_HELRO (Uncharacterized protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G1I9_HELRO)

HSP 1 Score: 62.4 bits (150), Expect = 6.180e-8
Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 3

Query:  234 LISAGANELSRDFYGRTPLHRAARAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDN-SFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAGADVMAGD 683
            L+  GA+ +++D YG   LH AA  G   VV  L+                       K G+   +N +F +     VN+ + NG+ PLH+AAE+G+ ++   LL++GA   V++   +T LH A+   +  ++E + LL++  ADV   D
Sbjct:    5 LLKKGADIVAKDIYGNNLLHTAASYGAEKVVEYLL---------------------GDKTGNKNFENKNFEI----DVNLPNNNGWTPLHIAAEKGNEKLCEHLLQNGAHVDVKSAGGKTALHWAS---IANSSECVALLLKHSADVSVTD 127

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A667WBS3_9TELE (Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) n=2 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667WBS3_9TELE)

HSP 1 Score: 63.2 bits (152), Expect = 8.030e-8
Identity = 51/162 (31.48%), Postives = 73/162 (45.06%), Query Frame = 3

Query:  108 RSEMPKLLAQIWRRSTLEDWNNFLGQGLLGAASVGDLEGAKELISAGANELSRD-FYGRTPLHRAARAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQT 590
            + ++P++L  +   + +   N F G+  L    +G+ + A+ L++AGA+  +RD   G T  H AAR G +D+V  LV                                     H+  VN  D +G  PLHLAA EGH +VV LLL   AEPG RN    T
Sbjct:   22 KGDLPEVLFLLQNGADVNGCNKF-GRTSLQVVKLGNPDVARALLAAGADPNARDPTCGLTVTHDAAREGFLDMVHVLVE------------------------------------HRADVNAVDFDGNLPLHLAAREGHLKVVQLLLGLTAEPGRRNGHGHT 146

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A183TWN7_TOXCA (Asparaginase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183TWN7_TOXCA)

HSP 1 Score: 65.5 bits (158), Expect = 1.680e-7
Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = 3

Query:  198 AASVGDLEGAKELISAGANELSRDFYGRTPLHRAARAGHVDVVSQLVRP------------NEVTSQLSERHVPCRLEWQSSKA--GSFLVDNSFSLLHKKKV----------NVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLL 650
            AA  GD++    L  +GA+  + D+ GRTPLH AA AGHV+ V  L+              N + S +  +++ C    +++ A  GS  + +S S    K +          N  D +G   LH A E G+  +   LL+HGA     ++   TP+  A +   G N EI+ LL
Sbjct:  195 AARNGDIDLLVNLRESGASFSAPDYNGRTPLHVAASAGHVNTVHFLLTQGANVHARDQWDENALLSAIRSKNLDCIRALRNAGALLGSIEMCSSASQQDLKTLTAWIMAGANPNETDYDGRTALHFAVENGNKEITEYLLKHGANAEAVDKFGNTPISEAEK---GNNPEILGLL 366

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: A0A8K0P8C7_LADFU (Uncharacterized protein n=2 Tax=Odonata TaxID=6961 RepID=A0A8K0P8C7_LADFU)

HSP 1 Score: 65.1 bits (157), Expect = 2.140e-7
Identity = 73/241 (30.29%), Postives = 91/241 (37.76%), Query Frame = 3

Query:  183 QGLLGAASVGDLEGAKELISAGANEL-----SRDFYGRTPLHRAARAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAGADVMAGDXXXXXXXXFAASSAGTEEAISALVRAGAKPGATGRIGRRTPLHEACARLRPRNVERLLELGADERALDS 890
            Q +L A   GDLE  + +I+A  + L          G TPLH AAR GH+ V+                               FL +    +       V + +G RPLH AA+ G   VV  LL  G +     R+D TPL  A      +  E +  L+ AGAD    +         AA       A   L  A     AT R GR TPLH A    R   VE LL  G     LDS
Sbjct:   43 QRILQATREGDLENLRSIIAAAGSTLHWADCKYKKSGDTPLHVAAREGHLHVLR------------------------------FLCEECPGV----NPEVSNLDGKRPLHEAAQAGRPDVVLYLLSRGVDVDPLKRADWTPLMLACTRSGPSTLETVRSLLAAGADPRLRNKDGWTALHVAAREGDPVVARCLLAAAPTLATATSRNGR-TPLHTAALHARGAVVELLLAAGCPPDPLDS 248

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BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Match: UPI001E2BD6B8 (ankyrin repeat domain-containing protein n=2 Tax=Ralstonia TaxID=48736 RepID=UPI001E2BD6B8)

HSP 1 Score: 61.6 bits (148), Expect = 2.730e-7
Identity = 51/161 (31.68%), Postives = 70/161 (43.48%), Query Frame = 3

Query:  198 AASVGDLEGAKELISAGANELSRDFYGRTPLHRAARAGHVDVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVNVRDENGYRP------LHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCCLGTNTEIIHLLVEAG 662
            A SV +   A+ LI+AGAN      YG TPL RA       +  QL+    V    S +       W    A    +D++ +L+        D N   P      LH+AAE G+  +VWLLL+HGA P V+    +T    A R       E++ LL   G
Sbjct:    4 AVSVSNWPAAQALIAAGANVNQATTYGETPLERAIGLMRGAMACQLIAHGAVVPSPSAKTA----HWVPLAAAISPLDDATTLVMFLLGRGYDVNARLPPANQTALHIAAESGNVGLVWLLLKHGANPQVQTIDGETAPAVAQRA---GQREVLRLLRTRG 157

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot

BLAST of mRNA_H-elongata_contig53356.12678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A086Q4G9_TOXGO	4.840e-11	32.16	Ankyrin repeat-containing protein n=15 Tax=Toxopla...	[more]
A0A7S2DW92_9DINO	4.330e-9	39.80	Hypothetical protein (Fragment) n=1 Tax=Alexandriu...	[more]
A0A6H5HW80_9HYME	5.990e-9	28.65	Uncharacterized protein n=1 Tax=Trichogramma brass...	[more]
UPI000C71A9D4	1.030e-8	37.61	ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxI...	[more]
UPI001EE4FC66	2.590e-8	30.83	serine/threonine-protein phosphatase 6 regulatory ...	[more]
T1G1I9_HELRO	6.180e-8	29.80	Uncharacterized protein n=1 Tax=Helobdella robusta...	[more]
A0A667WBS3_9TELE	8.030e-8	31.48	Cyclin-dependent kinase inhibitor 2C (p18, inhibit...	[more]
A0A183TWN7_TOXCA	1.680e-7	30.29	Asparaginase n=1 Tax=Toxocara canis TaxID=6265 Rep...	[more]
A0A8K0P8C7_LADFU	2.140e-7	30.29	Uncharacterized protein n=2 Tax=Odonata TaxID=6961...	[more]
UPI001E2BD6B8	2.730e-7	31.68	ankyrin repeat domain-containing protein n=2 Tax=R...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig53356	contig	H-elongata_contig53356:1260..3639 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	132.5
Seed ortholog evalue	4.3e-28
Seed eggNOG ortholog	2880.D7FTX7
EggNOG free text desc.	response to abiotic stimulus
EggNOG OGs	COG0666@1,KOG4177@2759
COG Functional cat.	G
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	1
Model size	2380
Cds size	1182
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig53356.12678.1	prot_H-elongata_contig53356.12678.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig53356 1277..2458 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930870.3104322-UTR-H-elongata_contig53356:1259..1276	1622930870.3104322-UTR-H-elongata_contig53356:1259..1276	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig53356 1260..1276 +
1691679605.3145308-UTR-H-elongata_contig53356:1259..1276	1691679605.3145308-UTR-H-elongata_contig53356:1259..1276	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig53356 1260..1276 +
1622930870.3479736-UTR-H-elongata_contig53356:2458..3639	1622930870.3479736-UTR-H-elongata_contig53356:2458..3639	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig53356 2459..3639 +
1691679605.3387082-UTR-H-elongata_contig53356:2458..3639	1691679605.3387082-UTR-H-elongata_contig53356:2458..3639	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig53356 2459..3639 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930870.3328524-CDS-H-elongata_contig53356:1276..2458	1622930870.3328524-CDS-H-elongata_contig53356:1276..2458	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig53356 1277..2458 +
1691679605.326968-CDS-H-elongata_contig53356:1276..2458	1691679605.326968-CDS-H-elongata_contig53356:1276..2458	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig53356 1277..2458 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig53356:1260..3639+
coding sequence from alignment at H-elongata_contig53356:1260..3639+

protein sequence of mRNA_H-elongata_contig53356.12678.1

>prot_H-elongata_contig53356.12678.1 ID=prot_H-elongata_contig53356.12678.1|Name=mRNA_H-elongata_contig53356.12678.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=394bp
MPELDTWINNSATLTHWVDHMSAVGGLPLDRSEMPKLLAQIWRRSTLEDW
NNFLGQGLLGAASVGDLEGAKELISAGANELSRDFYGRTPLHRAARAGHV
DVVSQLVRPNEVTSQLSERHVPCRLEWQSSKAGSFLVDNSFSLLHKKKVN
VRDENGYRPLHLAAEEGHGRVVWLLLRHGAEPGVRNRSDQTPLHSAARCC
LGTNTEIIHLLVEAGADVMAGDSAGRTPLHFAASSAGTEEAISALVRAGA
KPGATGRIGRRTPLHEACARLRPRNVERLLELGADERALDSDERTACDSM
GDMSAFGDPITDPDAEDVILKALAGAEKGRTWRRRRLLMLLRSRQPPLAQ
REGESHAPAEMGSAIAIAVDPEPLVAAAILLDDDVFRTIVSYL*

mRNA from alignment at H-elongata_contig53356:1260..3639+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig53356.12678.1 ID=mRNA_H-elongata_contig53356.12678.1|Name=mRNA_H-elongata_contig53356.12678.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2380bp|location=Sequence derived from alignment at H-elongata_contig53356:1260..3639+ (Himanthalia elongata Himel1 dioecious)
CTAATCGTGGAGCACGAATGCCGGAGCTGGATACATGGATCAACAACAGC
GCCACTCTGACACACTGGGTGGACCACATGTCGGCGGTCGGAGGCCTTCC
CCTGGATCGATCGGAGATGCCCAAGCTCCTCGCCCAGATTTGGCGCCGTT
CCACCCTAGAAGACTGGAACAACTTCTTGGGGCAAGGTCTCCTCGGGGCA
GCGTCCGTCGGGGATCTTGAGGGCGCCAAAGAGCTGATATCCGCAGGGGC
AAACGAACTCTCTAGAGACTTTTACGGACGAACGCCTCTTCATCGCGCTG
CAAGGGCTGGGCACGTGGATGTGGTCAGCCAGCTAGTTCGCCCAAACGAG
GTCACATCCCAACTATCGGAGAGGCATGTACCCTGCAGGCTCGAGTGGCA
ATCGAGCAAGGCGGGCTCTTTCCTTGTCGATAATTCCTTCTCTCTCCTCC
ACAAGAAAAAGGTGAACGTTCGCGATGAGAATGGGTATCGTCCCCTACAC
CTGGCCGCCGAGGAGGGTCACGGTCGCGTGGTGTGGCTGCTACTCCGCCA
CGGCGCGGAACCCGGTGTTCGCAACCGCAGTGACCAAACCCCATTGCACT
CAGCGGCGAGGTGCTGCCTCGGAACTAACACAGAAATAATACATCTCCTG
GTCGAGGCCGGAGCAGACGTGATGGCCGGGGACAGCGCCGGCAGAACGCC
TCTCCACTTTGCGGCCTCGTCCGCAGGCACAGAGGAAGCGATCTCTGCAC
TGGTGAGAGCTGGAGCAAAGCCCGGGGCGACCGGGCGCATCGGACGAAGA
ACTCCGCTGCACGAGGCTTGCGCAAGGCTGAGACCGAGGAACGTGGAGCG
GCTGCTGGAACTGGGAGCGGACGAGCGGGCCTTGGATAGCGATGAGCGAA
CCGCTTGCGACAGCATGGGAGATATGAGTGCGTTTGGAGATCCCATAACA
GATCCTGATGCGGAGGACGTGATCCTTAAAGCCCTGGCGGGCGCAGAAAA
GGGTAGGACCTGGCGCCGACGACGGTTGTTGATGCTGCTGCGATCGCGAC
AGCCGCCTCTTGCGCAACGAGAAGGAGAGTCACACGCGCCGGCAGAGATG
GGGTCAGCGATCGCGATCGCCGTTGATCCGGAGCCTCTGGTGGCCGCGGC
TATTCTTCTGGATGACGATGTTTTCCGTACCATCGTATCGTACTTGTAAC
GCAACGTCGTCGAGTGGTCGATTGCCCATCCCTCGGTTCTACCCCCATCC
CCCGTGCATGCAGCATGTGGCTTGGACTGCGGGCGGAATGAGGGCAATGC
CCGGCAGCATCCCAGCTGTTCCATCCTATCCCCGTCCTCTTTCCGTCCTC
TCCCCAATCGAGATCGAGATCGATAATCACGTGATGACCTAGGGGCAAGG
TTTCCTTGACGAGGCAGACTGCGGGGATTCATCGATTCGGAGAGTGAAAG
CAGGGAGGTACATAATCACTCTACACGTAGCTAAGCTACTGGAGGAGCTG
CGGTTGTGTGGTCACCACAAGCCCTTTTCGTCCCATAGCCACGGTAGAGC
AATGTGTAGCGAGCGTTCCAGGCATTAGTGGCTATATACCATCATGTATA
TTTCATGAACGGTACCATTTCTACCTTTTCATCATCAGCACTGGAGGAGC
CGGTGATATTTGTTATGACTCCGCCTTTCCCGCCTTGCGTCTCGATGAAG
CGGGGAGATGCGCCAAGGGAAGGGAACGATGCATTTTAACCGTCTCCCTT
CTGTAGCCATCCTCTCTCGGGTTGTGCATGCCGCCGGTATATATATATAT
ATATATATCTATCTAACCGATCCGGCGAAATATGCTCAATAGTAAAAAAA
ATAGTATAAAATTTAAAATCGAATGCTTGGTGATATCATGCGATTGGAAC
TCCCCGACCGGCTTTCGTTCCACGCCGAAGGAGCCATTCGCGTCTGCGCG
CGTCTCTCTATCAATAGCCCTGTTGTAGTAGATTGCTTGGAAGGCAATGG
CCATGCATGCTGCCATAGGACGTACCGGTGCAGCTGTATGTTTTGGATAG
AGCCTATAGAGCCTAGTTTTTATTCTTTTAATTTTTTTTTGAAGTCTTTC
AAGGGGTCTTGTATGGTCTTGTGTTAAAGCAGCAGCAGCTGTTGAGCGAT
TTCGCCCCGAACACTTTTTAGAACCCACTCCCCAAAGGTGTTCGCTAACT
GCTACCCTCCCTCGCGTATCTCGCGTTTATTCTCTAGGCTTGACTGGCTC
CGTCTCCTTCGCTTATGTTGAATTATAATATATACTATTTATAGCATTAA
ATCATCGGATGTTGAACTACAGTACCTAAAAGTGTCTACAGCCGATTACT
ATTTTAATACCTTAATACCTATATAATGTG

Coding sequence (CDS) from alignment at H-elongata_contig53356:1260..3639+

>mRNA_H-elongata_contig53356.12678.1 ID=mRNA_H-elongata_contig53356.12678.1|Name=mRNA_H-elongata_contig53356.12678.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2364bp|location=Sequence derived from alignment at H-elongata_contig53356:1260..3639+ (Himanthalia elongata Himel1 dioecious)
ATGCCGGAGCTGGATACATGGATCAACAACAGCGCCACTCTGACACACTG
GGTGGACCACATGTCGGCGGTCGGAGGCCTTCCCCTGGATCGATCGGAGA
TGCCCAAGCTCCTCGCCCAGATTTGGCGCCGTTCCACCCTAGAAGACTGG
AACAACTTCTTGGGGCAAGGTCTCCTCGGGGCAGCGTCCGTCGGGGATCT
TGAGGGCGCCAAAGAGCTGATATCCGCAGGGGCAAACGAACTCTCTAGAG
ACTTTTACGGACGAACGCCTCTTCATCGCGCTGCAAGGGCTGGGCACGTG
GATGTGGTCAGCCAGCTAGTTCGCCCAAACGAGGTCACATCCCAACTATC
GGAGAGGCATGTACCCTGCAGGCTCGAGTGGCAATCGAGCAAGGCGGGCT
CTTTCCTTGTCGATAATTCCTTCTCTCTCCTCCACAAGAAAAAGGTGAAC
GTTCGCGATGAGAATGGGTATCGTCCCCTACACCTGGCCGCCGAGGAGGG
TCACGGTCGCGTGGTGTGGCTGCTACTCCGCCACGGCGCGGAACCCGGTG
TTCGCAACCGCAGTGACCAAACCCCATTGCACTCAGCGGCGAGGTGCTGC
CTCGGAACTAACACAGAAATAATACATCTCCTGGTCGAGGCCGGAGCAGA
CGTGATGGCCGGGGACAGCGCCGGCAGAACGCCTCTCCACTTTGCGGCCT
CGTCCGCAGGCACAGAGGAAGCGATCTCTGCACTGGTGAGAGCTGGAGCA
AAGCCCGGGGCGACCGGGCGCATCGGACGAAGAACTCCGCTGCACGAGGC
TTGCGCAAGGCTGAGACCGAGGAACGTGGAGCGGCTGCTGGAACTGGGAG
CGGACGAGCGGGCCTTGGATAGCGATGAGCGAACCGCTTGCGACAGCATG
GGAGATATGAGTGCGTTTGGAGATCCCATAACAGATCCTGATGCGGAGGA
CGTGATCCTTAAAGCCCTGGCGGGCGCAGAAAAGGGTAGGACCTGGCGCC
GACGACGGTTGTTGATGCTGCTGCGATCGCGACAGCCGCCTCTTGCGCAA
CGAGAAGGAGAGTCACACGCGCCGGCAGAGATGGGGTCAGCGATCGCGAT
CGCCGTTGATCCGGAGCCTCTGGTGGCCGCGGCTATTCTTCTGGATGACG
ATGTTTTCCGTACCATCGTATCGTACTTGTAAATGCCGGAGCTGGATACA
TGGATCAACAACAGCGCCACTCTGACACACTGGGTGGACCACATGTCGGC
GGTCGGAGGCCTTCCCCTGGATCGATCGGAGATGCCCAAGCTCCTCGCCC
AGATTTGGCGCCGTTCCACCCTAGAAGACTGGAACAACTTCTTGGGGCAA
GGTCTCCTCGGGGCAGCGTCCGTCGGGGATCTTGAGGGCGCCAAAGAGCT
GATATCCGCAGGGGCAAACGAACTCTCTAGAGACTTTTACGGACGAACGC
CTCTTCATCGCGCTGCAAGGGCTGGGCACGTGGATGTGGTCAGCCAGCTA
GTTCGCCCAAACGAGGTCACATCCCAACTATCGGAGAGGCATGTACCCTG
CAGGCTCGAGTGGCAATCGAGCAAGGCGGGCTCTTTCCTTGTCGATAATT
CCTTCTCTCTCCTCCACAAGAAAAAGGTGAACGTTCGCGATGAGAATGGG
TATCGTCCCCTACACCTGGCCGCCGAGGAGGGTCACGGTCGCGTGGTGTG
GCTGCTACTCCGCCACGGCGCGGAACCCGGTGTTCGCAACCGCAGTGACC
AAACCCCATTGCACTCAGCGGCGAGGTGCTGCCTCGGAACTAACACAGAA
ATAATACATCTCCTGGTCGAGGCCGGAGCAGACGTGATGGCCGGGGACAG
CGCCGGCAGAACGCCTCTCCACTTTGCGGCCTCGTCCGCAGGCACAGAGG
AAGCGATCTCTGCACTGGTGAGAGCTGGAGCAAAGCCCGGGGCGACCGGG
CGCATCGGACGAAGAACTCCGCTGCACGAGGCTTGCGCAAGGCTGAGACC
GAGGAACGTGGAGCGGCTGCTGGAACTGGGAGCGGACGAGCGGGCCTTGG
ATAGCGATGAGCGAACCGCTTGCGACAGCATGGGAGATATGAGTGCGTTT
GGAGATCCCATAACAGATCCTGATGCGGAGGACGTGATCCTTAAAGCCCT
GGCGGGCGCAGAAAAGGGTAGGACCTGGCGCCGACGACGGTTGTTGATGC
TGCTGCGATCGCGACAGCCGCCTCTTGCGCAACGAGAAGGAGAGTCACAC
GCGCCGGCAGAGATGGGGTCAGCGATCGCGATCGCCGTTGATCCGGAGCC
TCTGGTGGCCGCGGCTATTCTTCTGGATGACGATGTTTTCCGTACCATCG
TATCGTACTTGTAA