mRNA_H-elongata_contig53338.12675.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A6H5JXE2_9PHAE (Asparagine synthetase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE2_9PHAE) HSP 1 Score: 122 bits (307), Expect = 2.630e-33 Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 1
Query: 13 GPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREV 234
G AAL+ EL KDQ RLW RNLGRDDR IADHG+EARFP+LDE VV Y+R LPL++VCNMDEP G+GDKKVLREV
Sbjct: 62 GDAALAEELLKDQDRLWTRNLGRDDRAIADHGREARFPFLDEAVVGYLRCLPLREVCNMDEPVGIGDKKVLREV 135
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: D7G9H9_ECTSI (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9H9_ECTSI) HSP 1 Score: 125 bits (313), Expect = 3.080e-31 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = 1
Query: 13 GPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREV 234
G AAL+ EL KDQ RLW RNLGRDDR IADHG+EARFP+LDE VV Y+RSLPL++VCNMDEP G+GDKKVLREV
Sbjct: 953 GDAALAEELLKDQGRLWTRNLGRDDRAIADHGREARFPFLDEDVVGYLRSLPLREVCNMDEPVGIGDKKVLREV 1026
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A7S4D4W9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4W9_HETAK) HSP 1 Score: 111 bits (277), Expect = 8.340e-27 Identity = 48/77 (62.34%), Postives = 63/77 (81.82%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREV 234
R G AL EL D ARLW RNLGRDDRC++DHG+EARFP+LDEGVV+ +R+LPL+++ ++ PPG+GDKK+LR+V
Sbjct: 318 REGGEGALRRELAADVARLWTRNLGRDDRCVSDHGREARFPFLDEGVVAAVRALPLRRIVDLSLPPGIGDKKILRDV 394
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A2P6N4R8_9EUKA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N4R8_9EUKA) HSP 1 Score: 110 bits (274), Expect = 5.710e-26 Identity = 55/94 (58.51%), Postives = 67/94 (71.28%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREVREN-RTKQNKTGTGRTI 282
+ G L EL KD RLW+RNLGRDDR I+DHG+EARFP+LDEGVV YI SLPL +C+ D PPGVGDKK+LR++ + K+ T T R I
Sbjct: 433 KKGGKMELRRELDKDIHRLWQRNLGRDDRLISDHGREARFPFLDEGVVRYISSLPLNVICDFDCPPGVGDKKILRQLADRIGLKEASTLTKRAI 526
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A2N9FRC1_FAGSY (Asparagine synthetase domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FRC1_FAGSY) HSP 1 Score: 100 bits (249), Expect = 1.130e-25 Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 25 LSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREV 234
L E++ D R+W+RNLGRDDRCIAD GKEARFP+LDE V+ + ++PL ++ N+D+P G+GDKK+LREV
Sbjct: 9 LHEEMKLDMQRIWKRNLGRDDRCIADSGKEARFPFLDEDVIRILLNIPLWEIANLDQPSGIGDKKILREV 78
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A498IBB0_MALDO (Uncharacterized protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498IBB0_MALDO) HSP 1 Score: 108 bits (270), Expect = 1.200e-25 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREVRE 240
RN AL+ E++ D R+W+RNLGRDDRCIADHGKEARFP+LDE V+ + PL +V N+D+P G+GDKK+LREV E
Sbjct: 248 RNGSWLALNEEMKLDMQRIWKRNLGRDDRCIADHGKEARFPFLDEDVIRILLGFPLWEVTNLDQPSGIGDKKILREVAE 326
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A498I960_MALDO (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Malus domestica TaxID=3750 RepID=A0A498I960_MALDO) HSP 1 Score: 108 bits (270), Expect = 1.960e-25 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREVRE 240
RN AL+ E++ D R+W+RNLGRDDRCIADHGKEARFP+LDE V+ + PL +V N+D+P G+GDKK+LREV E
Sbjct: 533 RNGSWLALNEEMKLDMQRIWKRNLGRDDRCIADHGKEARFPFLDEDVIRILLGFPLWEVTNLDQPSGIGDKKILREVAE 611
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A540LS36_MALBA (Glutamine amidotransferase type-2 domain-containing protein n=4 Tax=Malus TaxID=3749 RepID=A0A540LS36_MALBA) HSP 1 Score: 107 bits (267), Expect = 4.740e-25 Identity = 47/79 (59.49%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREVRE 240
RN +L+ E++ D R+W+RNLGRDDRCIADHGKEARFP+LDE V+ + PL +V N+D+P G+GDKK+LREV E
Sbjct: 533 RNGSWLSLNEEMKLDMQRIWKRNLGRDDRCIADHGKEARFPFLDEDVIRILLGFPLWEVTNLDQPSGIGDKKILREVAE 611
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A251R5P9_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251R5P9_PRUPE) HSP 1 Score: 106 bits (265), Expect = 6.530e-25 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1
Query: 4 RNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREVRE 240
RN AL E++ D R+W+RNLGRDDRCIAD+GKEARFP+LDE V+ + +PL +V N+D+P GVGDKK+LREV E
Sbjct: 387 RNGSWLALHEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIKILLGIPLWEVTNLDQPSGVGDKKILREVAE 465
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Match: A0A0K9Q6G8_ZOSMR (Asparagine synthetase domain-containing protein (Fragment) n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9Q6G8_ZOSMR) HSP 1 Score: 105 bits (262), Expect = 6.550e-25 Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 13 GPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSYIRSLPLQKVCNMDEPPGVGDKKVLREV 234
G AAL E++ D R+W+RNLGRDDRCI+DHGKEARFP+LDE V+ + +PL ++ N+DEP G GDKK+LREV
Sbjct: 132 GWAALDEEMKLDMHRIWKRNLGRDDRCISDHGKEARFPFLDEDVIKCLLEMPLWEIANLDEPSGKGDKKILREV 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53338.12675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53338.12675.1 >prot_H-elongata_contig53338.12675.1 ID=prot_H-elongata_contig53338.12675.1|Name=mRNA_H-elongata_contig53338.12675.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=98bp MRNAGPAALSSELQKDQARLWRRNLGRDDRCIADHGKEARFPYLDEGVVSback to top mRNA from alignment at H-elongata_contig53338:2936..3567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53338.12675.1 ID=mRNA_H-elongata_contig53338.12675.1|Name=mRNA_H-elongata_contig53338.12675.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=632bp|location=Sequence derived from alignment at H-elongata_contig53338:2936..3567- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53338:2936..3567- >mRNA_H-elongata_contig53338.12675.1 ID=mRNA_H-elongata_contig53338.12675.1|Name=mRNA_H-elongata_contig53338.12675.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=588bp|location=Sequence derived from alignment at H-elongata_contig53338:2936..3567- (Himanthalia elongata Himel1 dioecious)back to top |