prot_H-elongata_contig53312.12670.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53312.12670.1
Unique Nameprot_H-elongata_contig53312.12670.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length72
Homology
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5KMK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMK0_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 5.550e-22
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  +P+Y DNT+ LH  GNR++SSR KHIALR+FF++ELV EGKI+IHYA T   LA +GTK
Sbjct:  122 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYAPTEDNLAHIGTK 193          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 1.930e-21
Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  +P+Y DNT+ LH  GNR++SSR KHIALR+FF++ELV EGKI+IHY +T   LAD+GTK
Sbjct:  907 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTK 978          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 4.960e-21
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  +P+Y DNT+ LH  GNR++SSR KHIALR+FF++ELV EGKI+IHY  T   LAD+GTK
Sbjct: 1576 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 1647          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 6.470e-21
Identity = 43/72 (59.72%), Postives = 55/72 (76.39%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  +P+Y DNT+ LH  GNR++SSR KHIALR+FF++ELV EGKI+IHY  T   LAD+GTK
Sbjct:  347 MMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTK 418          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 4.370e-20
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  VPLY DNT+ LH  GNR++SSR  HIALR+F+++ELV EG+I+IHY  T   LAD+GTK
Sbjct: 1105 MLTELGFGKEFAQVPLYCDNTATLHALGNRSFSSRENHIALRFFYIRELVLEGRISIHYVPTDSNLADIGTK 1176          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 5.880e-20
Identity = 42/72 (58.33%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL   + F  +P+Y DNT+ LH  GNR++SSR KHIALR+FF++ELV EGKI+IHY  T   LAD+GTK
Sbjct:  568 MMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTK 639          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5K129_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K129_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 2.070e-19
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            ++ EL   + F  VPLY DNT+ LH  GNR++SSR KHIALR+F+++EL+ EG+I+IHY  T   +AD+GTK
Sbjct: 1077 ILTELGLGKEFAQVPLYCDNTATLHALGNRSFSSRTKHIALRFFYIRELISEGRISIHYIPTDSNIADIGTK 1148          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5J9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9N2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 3.470e-19
Identity = 41/72 (56.94%), Postives = 53/72 (73.61%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            ++ EL F + F  VPLY DNT+ LH  GNR++SSR KHIALR+FF+++LV EGKI IH+  T    AD+GTK
Sbjct:  265 ILTELGFGKEFAQVPLYCDNTATLHSLGNRSHSSRTKHIALRFFFIRDLVSEGKIFIHFVPTDSNPADIGTK 336          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5KBU1_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU1_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 2.500e-18
Identity = 39/72 (54.17%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F   F   PLYI NT+ LH+ GN+T+S R KH+ALR+F+++E+V+EG+I+IHY  T   LAD+GTK
Sbjct:  601 MMKELGFGSEFRSAPLYI-NTATLHVIGNQTFSGRTKHVALRFFYIREIVKEGRISIHYIPTEDNLADIGTK 671          
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Match: A0A6H5J9Q7_9PHAE (gag_pre-integrs domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Q7_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 4.640e-18
Identity = 40/72 (55.56%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    1 MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELVEEGKINIHYAKTAYQLADLGTK 72
            M+ EL F + F  V LY  NT+ LH  GNR++SSR KHIALR+F+++ELV EG+I+IHY  T    AD+GTK
Sbjct:  733 MLTELGFGKEFAQVRLYCGNTATLHALGNRSFSSREKHIALRFFYIRELVSEGRISIHYVPTDSNPADIGTK 804          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53312.12670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMK0_9PHAE5.550e-2259.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE1.930e-2159.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJH6_9PHAE4.960e-2159.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5U2_9PHAE6.470e-2159.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JBV6_9PHAE4.370e-2058.33Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JME8_9PHAE5.880e-2058.33Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K129_9PHAE2.070e-1954.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9N2_9PHAE3.470e-1956.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBU1_9PHAE2.500e-1854.17CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5J9Q7_9PHAE4.640e-1855.56gag_pre-integrs domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53312contigH-elongata_contig53312:715..930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53312.12670.1mRNA_H-elongata_contig53312.12670.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53312 715..930 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53312.12670.1 ID=prot_H-elongata_contig53312.12670.1|Name=mRNA_H-elongata_contig53312.12670.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
MIMELSFDESFGGVPLYIDNTSALHIAGNRTYSSRAKHIALRYFFVQELV
EEGKINIHYAKTAYQLADLGTK
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