prot_H-elongata_contig53108.12642.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig53108.12642.1
Unique Nameprot_H-elongata_contig53108.12642.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length144
Homology
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A0A6H5L369_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L369_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.480e-25
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0
Query:    1 LHLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            LHLAAFEGSVDT++LLL+AGASVN QDLDGWTPLHYAARNE  G  +VRAL AAGA+VDK ++RGRT
Sbjct:   90 LHLAAFEGSVDTILLLLSAGASVNAQDLDGWTPLHYAARNEMGGKVVVRALVAAGAEVDKANHRGRT 156          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A7RHQ3_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RHQ3_NEMVE)

HSP 1 Score: 55.8 bits (133), Expect = 5.350e-7
Identity = 29/67 (43.28%), Postives = 40/67 (59.70%), Query Frame = 0
Query:    1 LHLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            LH   FEG++  V +L+  GA VN+Q+ +G+TPLHY A   SN  D+ + L    A  D  DY G+T
Sbjct:   51 LHQLVFEGNLKCVRMLVNLGADVNMQNEEGFTPLHYCAL--SNNFDMAKFLMKKSANPDIADYNGKT 115          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A0A0G8ATC3_9SYNE (Uncharacterized protein n=4 Tax=Candidatus Synechococcus spongiarum TaxID=431041 RepID=A0A0G8ATC3_9SYNE)

HSP 1 Score: 52.8 bits (125), Expect = 2.020e-6
Identity = 30/61 (49.18%), Postives = 36/61 (59.02%), Query Frame = 0
Query:    7 EGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            E S D V   L  GA  N +D DGWTPLH+AAR +S   ++V+AL  AGA     D  GRT
Sbjct:    2 EASSDDVGRCLLEGAEPNARDEDGWTPLHFAAR-DSKTSEVVQALLDAGADPSARDGYGRT 61          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A0A345ZBG7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Dependentiae bacterium (ex Spumella elongata CCAP 955/1) TaxID=2066483 RepID=A0A345ZBG7_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 3.490e-6
Identity = 30/70 (42.86%), Postives = 40/70 (57.14%), Query Frame = 0
Query:    1 LHLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAA---RNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            LH A    + +   LL+ AGA+VN QD+DG+TPLH A     NE    D ++AL  AGA +   D  G+T
Sbjct:  171 LHFAIKYNAYNLAALLIGAGANVNAQDIDGYTPLHSAVIYHHNEDTTNDSIKALLKAGANLYIQDKEGKT 240          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: L1IC23_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IC23_GUITC)

HSP 1 Score: 52.8 bits (125), Expect = 2.110e-5
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    2 HLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGR 66
            HL A  G++  + LL+  GA V  +D++G+TPLHYAA+     GD+   L A GA+V   +  G+
Sbjct:  135 HLLALSGNIKALRLLVRNGAGVRARDVEGYTPLHYAAKR--GDGDMCDVLIALGARVTDANKLGQ 197          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A0A6A6SVC8_9PLEO (Ankyrin (Fragment) n=1 Tax=Lophiostoma macrostomum CBS 122681 TaxID=1314788 RepID=A0A6A6SVC8_9PLEO)

HSP 1 Score: 49.3 bits (116), Expect = 2.900e-5
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 0
Query:    8 GSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            GS ++   LL AGA  NV + DGW+ LH+AARN     D+++ L + GA+ +  D RG T
Sbjct:   10 GSTESAKKLLEAGADPNVFEHDGWSALHWAARNGHL--DVLKLLLSYGARTEVRDSRGHT 67          
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Match: A0A183CEN0_GLOPA (ANK_REP_REGION domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183CEN0_GLOPA)

HSP 1 Score: 52.4 bits (124), Expect = 3.900e-5
Identity = 29/67 (43.28%), Postives = 37/67 (55.22%), Query Frame = 0
Query:    1 LHLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRALAAAGAKVDKVDYRGRT 67
            LH+AA +G    + +L  AGA VN QD +GWTPLH AA       D  R L   GA +D + + G T
Sbjct:  225 LHVAASKGYNKLIGMLSRAGADVNAQDFEGWTPLHAAAHWGER--DACRILMENGANLDALTHTGHT 289          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53108.12642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5L369_9PHAE2.480e-2579.10Protein kinase domain-containing protein n=1 Tax=E... [more]
A7RHQ3_NEMVE5.350e-743.28Predicted protein n=1 Tax=Nematostella vectensis T... [more]
A0A0G8ATC3_9SYNE2.020e-649.18Uncharacterized protein n=4 Tax=Candidatus Synecho... [more]
A0A345ZBG7_9BACT3.490e-642.86Uncharacterized protein n=1 Tax=Candidatus Depende... [more]
L1IC23_GUITC2.110e-540.00Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A6A6SVC8_9PLEO2.900e-543.33Ankyrin (Fragment) n=1 Tax=Lophiostoma macrostomum... [more]
A0A183CEN0_GLOPA3.900e-543.28ANK_REP_REGION domain-containing protein n=1 Tax=G... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 29..60
e-value: 0.0067
score: 25.6
coord: 99..128
e-value: 280.0
score: 9.1
coord: 1..25
e-value: 270.0
score: 9.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1..28
score: 12.075
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 29..63
score: 11.621
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..79
e-value: 2.2E-20
score: 74.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 80..144
e-value: 6.6E-7
score: 30.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..139
NoneNo IPR availablePFAMPF13637Ank_4coord: 1..42
e-value: 5.6E-11
score: 42.7
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 100..141
coord: 1..67
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..144
score: 24.692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig53108contigH-elongata_contig53108:2539..2970 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig53108.12642.1mRNA_H-elongata_contig53108.12642.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig53108 2539..2970 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig53108.12642.1 ID=prot_H-elongata_contig53108.12642.1|Name=mRNA_H-elongata_contig53108.12642.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=144bp
LHLAAFEGSVDTVMLLLAAGASVNVQDLDGWTPLHYAARNESNGGDLVRA
LAAAGAKVDKVDYRGRTGELGRKCFVHASRNVTHCSFVKKYHLKITLMLS
WTALHIAYLYRNGLATSELLEHGASTRIRDRHGNTAVQMLQQYK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom