mRNA_H-elongata_contig53086.12636.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A6H5KI73_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI73_9PHAE) HSP 1 Score: 305 bits (780), Expect = 2.900e-100 Identity = 151/186 (81.18%), Postives = 170/186 (91.40%), Query Frame = 1
Query: 1 SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRSVTPESPVVLPSITNQSLM 558
SV++FRP ENAKRIRASA RILMEPPP ++F++ACKM VKANME+VPPYG++G+LYLRPLLFG+GARIGLQP+DEYTLLV+A PV +YY KGG KPTTAVVIEDYDRAAPKGVG VKVAGNYAADM+PNMLAKQ GY IGLYLD+KTNTLVEEFSTSNF AVT N+ VTP+SP VLPSITN+SLM
Sbjct: 160 SVKLFRPDENAKRIRASAERILMEPPPADLFIKACKMAVKANMEYVPPYGSEGALYLRPLLFGTGARIGLQPSDEYTLLVMAIPVGNYY-KGGFKPTTAVVIEDYDRAAPKGVGAVKVAGNYAADMMPNMLAKQAGYPIGLYLDAKTNTLVEEFSTSNFFAVTEDNKFVTPDSPAVLPSITNKSLM 344
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A6V1P2K0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P2K0_HETAK) HSP 1 Score: 253 bits (646), Expect = 1.350e-80 Identity = 131/186 (70.43%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 1 SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRSVTPESPVVLPSITNQSLM 558
SV+IFR ENAKRI SA+RILM PEE FVE CK V+ N++FVPPYG GSLYLRPLLFGSG R+GLQPADEYTLLV+ PV YY GG +P TAVVI+DYDRAAP+GVG KVAGNYAADMLPN++AK+ G+ IGLYLD+KTN VEEFSTSNFL VT R TP+SP +L SITN+SLM
Sbjct: 115 SVKIFRADENAKRINRSAARILMPEFPEERFVELCKEVVRDNLDFVPPYGTGGSLYLRPLLFGSGPRVGLQPADEYTLLVMVMPVADYYP-GGPQPITAVVIDDYDRAAPRGVGECKVAGNYAADMLPNIMAKKAGFPIGLYLDAKTNRFVEEFSTSNFLGVTADGRYRTPDSPTILKSITNKSLM 299
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: K8Z6W3_NANGC (Branched-chain amino acid aminotransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W3_NANGC) HSP 1 Score: 250 bits (638), Expect = 6.630e-80 Identity = 124/186 (66.67%), Postives = 149/186 (80.11%), Query Frame = 1
Query: 1 SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRSVTPESPVVLPSITNQSLM 558
S+RIFRP ENAKR+R SA R+LM PE+ FVEA + V N ++VPP+G GSLY+RPLLFGSG RIGL P+DEYTLL++ PV YY KGG+ P +A+VI+DYDRAAP+GVG VKVAGNYAAD+LPN+L K+ GY IGLYLD+KTN+ VEEFSTSNF+A+ VTP SP VLPSITN+SLM
Sbjct: 75 SIRIFRPQENAKRLRMSAERLLMTAFPEDNFVEAVRRVVADNADYVPPFGTGGSLYIRPLLFGSGPRIGLNPSDEYTLLIMPIPVGDYY-KGGLSPVSALVIDDYDRAAPRGVGHVKVAGNYAADLLPNLLGKKKGYPIGLYLDAKTNSFVEEFSTSNFVAIDSSGAFVTPRSPTVLPSITNKSLM 259
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A7S3NIU8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIU8_9STRA) HSP 1 Score: 237 bits (604), Expect = 4.570e-74 Identity = 115/185 (62.16%), Postives = 142/185 (76.76%), Query Frame = 1
Query: 4 VRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRSVTPESPVVLPSITNQSLM 558
VR+FRPY+NAKR+R A R LM P E +FVEACK V N++FVPPYG++G+LY+RPLLFGSG RIGLQPAD Y LV+ TPV YY G+K A+VI+D+DRAAP+GVG VK+AGNYA D+ PN AK++G+ +GLYLD+ T+T VEEFSTSN + GN +TPES +LPSITN SLM
Sbjct: 128 VRLFRPYDNAKRMRRGAERTLMIAPDEVLFVEACKRAVMNNLDFVPPYGSKGALYIRPLLFGSGPRIGLQPADAYDFLVIVTPVAEYYRSAGLKAVDALVIDDFDRAAPRGVGSVKLAGNYAPDLQPNFKAKEDGFQVGLYLDAVTHTYVEEFSTSNLFGI-KGNTYLTPESSAILPSITNDSLM 311
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A7S2LFK1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LFK1_9STRA) HSP 1 Score: 236 bits (602), Expect = 1.200e-73 Identity = 119/186 (63.98%), Postives = 144/186 (77.42%), Query Frame = 1
Query: 4 VRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRS-VTPESPVVLPSITNQSLM 558
V +FRP ENAKR++ SA RI+M P PEEMFVEACK V+ N+ +VPPYG+ G+LYLRPLLFGSG+RIGLQPADEYT ++L PV YY G K +V++E YDRAA GVG VKVAGNYAADMLPN L K+ GY I LYLDS+T + +EEFSTSNF+ + ++ VTP+S VLPSITN+SLM
Sbjct: 141 VYLFRPDENAKRMKMSADRIMMAPVPEEMFVEACKTVVRDNIAYVPPYGSGGALYLRPLLFGSGSRIGLQPADEYTFIILVIPVGDYYKGGLSKTVHSVIVEGYDRAAKYGVGAVKVAGNYAADMLPNYLNKEAGYPISLYLDSETRSTIEEFSTSNFIGINRSEKTYVTPKSTSVLPSITNKSLM 326
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A7S1YVX8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YVX8_TRICV) HSP 1 Score: 232 bits (592), Expect = 2.220e-73 Identity = 114/187 (60.96%), Postives = 144/187 (77.01%), Query Frame = 1
Query: 1 SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTH-GNRSVTPESPVVLPSITNQSLM 558
+V IFRP ENAKR+++S RI+M P P ++F++ C VK N+ +VPPYG+ G+LYLRPLLFGSG RIGLQPADEYT L++ PV YY G P A++I+DYDRAAP+GVG VKVAGNYAAD+LPNM K+ G+ I LYLD+ T +LVEEFSTSNF+ + + + +TP SP VLPSITN+SLM
Sbjct: 35 NVYIFRPDENAKRLQSSCERIMMPPVPHDLFMKVCNDVVKDNIAYVPPYGSGGALYLRPLLFGSGPRIGLQPADEYTFLIMVIPVGDYYKGGLASPVDALIIDDYDRAAPRGVGNVKVAGNYAADLLPNMQGKKKGFPISLYLDAATQSLVEEFSTSNFVGIDNDAKKYITPISPSVLPSITNKSLM 221
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A0G4F3S3_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F3S3_VITBC) HSP 1 Score: 233 bits (593), Expect = 2.370e-72 Identity = 114/186 (61.29%), Postives = 143/186 (76.88%), Query Frame = 1
Query: 4 VRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTH-GNRSVTPESPVVLPSITNQSLM 558
VR+FRP +NA+R++ SA R++M P PE +F+ AC+ V AN+ +VPPYG GSLYLRP+L GS RIG+QPA+EYT V+ PV YY KGG++P +A V+E YDRAAP+GVG KVAGNYAAD+LPN + K G+ I LYLD+K N ++EFSTSNF+AVT GN VTPESP +LPSITN SLM
Sbjct: 132 VRMFRPLDNARRLQRSAERLMMPPVPENIFIYACRQAVLANLAYVPPYGTGGSLYLRPVLIGSSPRIGVQPAEEYTFFVMVIPVGDYY-KGGLQPVSAWVVEGYDRAAPQGVGAYKVAGNYAADLLPNSIGKSKGFPIALYLDAKENRYIDEFSTSNFIAVTQDGNTYVTPESPSILPSITNLSLM 316
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A1Z5JJ00_FISSO (Branched-chain amino acid aminotransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ00_FISSO) HSP 1 Score: 232 bits (591), Expect = 3.130e-72 Identity = 114/187 (60.96%), Postives = 143/187 (76.47%), Query Frame = 1
Query: 1 SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRS-VTPESPVVLPSITNQSLM 558
+V IFRP ENAKR++AS RI M P ++F++A K V N+E+VPPYG+ G+LY+RP+LFGSG RIGLQPADEYT + L PV YY G P ++I D+DRAAP+GVG KVAGNYAAD+LPNML+K+ G+ IGLYLD+KT T +EEFSTSNF+ + H S VTP+SP VLPSITN++LM
Sbjct: 117 TVNIFRPDENAKRMQASCDRIRMAKMPTDLFIDAVKAVVNDNIEYVPPYGSGGALYIRPILFGSGPRIGLQPADEYTFVCLVIPVGDYYKGGLASPVKGLLITDFDRAAPRGVGAAKVAGNYAADLLPNMLSKKQGFPIGLYLDAKTQTKIEEFSTSNFVGIKHATNSYVTPKSPSVLPSITNKALM 303
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: B7FTZ3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FTZ3_PHATC) HSP 1 Score: 232 bits (592), Expect = 3.640e-72 Identity = 115/186 (61.83%), Postives = 142/186 (76.34%), Query Frame = 1
Query: 4 VRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHG-NRSVTPESPVVLPSITNQSLM 558
V +FRP ENA R+++S R++M P E FV A VK N+E+VPPYG+ G+LY+RPLLFGSG RIGLQPADEYT L+L PV YY G P ++I+D+DRAAP+GVG VKVAGNYAAD+LPNML+K+ G+ IGLYLDSKT +EEFSTSNF+ + + N VTP+SP VLPSITN+SLM
Sbjct: 131 VYVFRPEENAHRMQSSCERLMMPVMPTETFVNAVNTVVKDNIEYVPPYGSNGALYIRPLLFGSGPRIGLQPADEYTFLILVIPVGDYYKGGLATPVNGLLIQDFDRAAPRGVGAVKVAGNYAADLLPNMLSKKKGFPIGLYLDSKTQNFIEEFSTSNFVGIDNSKNAYVTPKSPSVLPSITNKSLM 316
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Match: A0A448YX75_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YX75_9STRA) HSP 1 Score: 231 bits (590), Expect = 6.700e-72 Identity = 115/183 (62.84%), Postives = 142/183 (77.60%), Query Frame = 1
Query: 13 FRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGAQGSLYLRPLLFGSGARIGLQPADEYTLLVLATPVKSYYSKGGMKPTTAVVIEDYDRAAPKGVGGVKVAGNYAADMLPNMLAKQNGYSIGLYLDSKTNTLVEEFSTSNFLAVTHGNRS-VTPESPVVLPSITNQSLM 558
FRP ENA R+++S RI+M P ++F +A + VK N+EFVPPYG G+LY+RPLLFGSG RIGLQPADEYT ++ PV YY G KP A++I+DYDRAAP+GVG VKVAGNYAAD+LPNM +K+ GY IGLYLD+KT VEEFSTSNF+ + + N+ VTP+SP VLPSITN+SLM
Sbjct: 130 FRPEENAARMQSSCRRIMMPELPTDLFCDAVQTVVKDNIEFVPPYGTGGALYIRPLLFGSGPRIGLQPADEYTFCIMVMPVADYYEGGLSKPVDALIIKDYDRAAPQGVGAVKVAGNYAADLLPNMESKKKGYPIGLYLDAKTQQYVEEFSTSNFVGIDNKNKKFVTPKSPSVLPSITNKSLM 312 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig53086.12636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig53086.12636.1 >prot_H-elongata_contig53086.12636.1 ID=prot_H-elongata_contig53086.12636.1|Name=mRNA_H-elongata_contig53086.12636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=186bp SVRIFRPYENAKRIRASASRILMEPPPEEMFVEACKMCVKANMEFVPPYGback to top mRNA from alignment at H-elongata_contig53086:1..1731- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig53086.12636.1 ID=mRNA_H-elongata_contig53086.12636.1|Name=mRNA_H-elongata_contig53086.12636.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1731bp|location=Sequence derived from alignment at H-elongata_contig53086:1..1731- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig53086:1..1731- >mRNA_H-elongata_contig53086.12636.1 ID=mRNA_H-elongata_contig53086.12636.1|Name=mRNA_H-elongata_contig53086.12636.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1116bp|location=Sequence derived from alignment at H-elongata_contig53086:1..1731- (Himanthalia elongata Himel1 dioecious)back to top |