prot_H-elongata_contig5307.12633.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5307.12633.1
Unique Nameprot_H-elongata_contig5307.12633.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length332
Homology
BLAST of mRNA_H-elongata_contig5307.12633.1 vs. uniprot
Match: D7G857_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G857_ECTSI)

HSP 1 Score: 426 bits (1096), Expect = 1.340e-145
Identity = 205/332 (61.75%), Postives = 245/332 (73.80%), Query Frame = 0
Query:    1 MIVRDEEENLRANLPLWNDVASCYVFGVDDRTADGTVQAIREALPAKKPRFVFFYTFEDFSQARNAVLRSTSHNFPGVSHVLIADADWRPQQETLDLSDLDFDHGVFQFRIWDHSGHTTRLAGWLLRNDPGLMFKYSNAPSKLIKWQVAVVESDSSWHATEHGHSRTAERFLFDMDLLELDYKDDPTDLHNLFYLGITTYSYMETLIGKGTHEKTPELQRLIDSGMSYFLQAVDLYGDQEGLEFIWSSIRWLAYGYHYFVGDDAEAERWYRKCIDYDVTRIDCEVFLSRLYLDTGDLDNAWERAKVGLLYNYPMHRPLDYFYIFECFVPIQV 332
            MIVRDEE +L  NLPLW DVA C+V GVDDRT+D T   I++ L  K  RFVF +TF DF+QARNAVLRST+HNFP  SH+++ADADWRP   T+D S+LDF HG F F +WDHSGHT+RL GWL R D  L FKY          QV VVESDS+W+A     SR+ ERF FD++ LEL+Y+DDPTDLH LFYLGIT ++Y+E+L+GKGTHEKTPELQ  I  GMSYF QAVDL+G+    E +W S RWL+YGYHYFVGD  EAE+ Y+ CI+YD  RIDC VFLSRLYLD   LD AW+ AK GL++  P  + + YFY FECF+P QV
Sbjct:   88 MIVRDEEFSLSENLPLWLDVADCFVIGVDDRTSDATNMVIQQVLGDKTARFVFTFTFMDFAQARNAVLRSTAHNFPDTSHIIVADADWRPDLATVDKSELDFVHGSFPFLVWDHSGHTSRLMGWLHRFDKNLRFKYR---------QVRVVESDSNWNAXXXXXSRSFERFKFDLEFLELEYEDDPTDLHTLFYLGITKFAYIESLLGKGTHEKTPELQAFITDGMSYFRQAVDLHGEIPNSELVWGSKRWLSYGYHYFVGDSEEAEKMYKSCIEYDRARIDCLVFLSRLYLDNNALDAAWDTAKEGLVHRPPAGQVMTYFYTFECFLPTQV 410          
BLAST of mRNA_H-elongata_contig5307.12633.1 vs. uniprot
Match: A0A7S3NFA2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFA2_9STRA)

HSP 1 Score: 238 bits (608), Expect = 5.590e-71
Identity = 132/360 (36.67%), Postives = 197/360 (54.72%), Query Frame = 0
Query:    3 VRDEEENLRANLPLWNDVASCYVFGVDDRTADGTVQAIREALPAKKPRFVFFYTFEDFSQARNAVLRSTSHNFPGVSHVLIADADWRPQQETLDLSDLDFDHGVFQFRIWDHSGHTTRLAGWLLRNDPGLMFKY--------------SNAPSKLIKWQVAVVESDS--SWHATEHG------HSRTAERFLFDMDLLELDYKD-DPTDLHNLFYLGITTYSYMETLIGKGTHEKTPELQRLIDSGMSYFLQAV-----DLYGDQEG-LEFIWSSIRWLAYGYHYFVGDDAEAERWYRKCIDYDVTRIDCEVFLSRLYLDTGDLDNAWERAKVGLLYNYP--MHRPLDYFYIFECFVPIQ 331
            +RDEEEN+RANL  W  +    V GVD+RT DG+ + + E +   KP ++F++ FE+F Q R  VLR     F   SH LI D DW P ++TL    LDF+H  F F ++D +G TTR   WL+R++ GL F+Y              +    +++ WQV  VE     +WH TEHG      HS + +R+L D+DLL LD ++  P D H L+YLG T  + ++ ++G G H+ T ++   I+ G+ Y  Q V     DL     G  E  W+++RWLA+ YH +  D  +A  WY+KC + D  R+DC  F + LY  +GD  +AW    + L +++          FYI+ C +P++
Sbjct:   32 IRDEEENVRANLGKWERIVDYLVCGVDERTKDGSGRTVAEII-GHKPHWIFYFRFENFGQGRTVVLREAWRKFSHASHALIIDPDWLPIEKTLIKDQLDFEHRKFSFLVYDRNGLTTRNVAWLIRHEEGLEFRYRLHEVLVLPKNSIYNTTNLRMLSWQVKEVEVKGRRTWHTTEHGNATNVGHSMSYKRYLRDLDLLYLDLEELGPNDPHTLYYLGATHLACIDAILGVGFHKLTEQVLYHINQGIFYLEQRVQPNIIDLANRIGGNSEETWAAVRWLAHSYHNYKRDYNKAHYWYKKCHEMDPLRVDCATFHASLYRTSGDYTSAWNSILIPLQFDFTDGQRTFAHNFYIYNCTLPLE 390          
BLAST of mRNA_H-elongata_contig5307.12633.1 vs. uniprot
Match: A0A482RZ88_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZ88_9ARCH)

HSP 1 Score: 129 bits (324), Expect = 1.600e-32
Identity = 72/179 (40.22%), Postives = 97/179 (54.19%), Query Frame = 0
Query:    2 IVRDEEENLRANLPLWNDVASCYVFGVDDRTADGTVQAIREALPAKKPRFVFF-YTFEDFSQARNAVLRSTSHNFPGVSHVLIADADWRPQQETLDLSDLDFDHGVFQFRIWDHSGHTTRLAGWLLRNDPGLMFKYS--------NAPSKLIKWQVAVVESDSSWHATEHGHSRTAERF 171
            I+RDEE NLR+NLPLW      + F VD RT DG+V+AI + L  K   +V   Y+F  F +AR+A L     +F   SHV+IAD DW+P  ET+D ++LD    VF+F ++D SG T R   W L + PGL  +Y+        +   K I W    +E   +WH T  GH      F
Sbjct:   26 IIRDEEVNLRSNLPLWAQFTDYFAFLVDYRTIDGSVKAINQILEPKNISYVIQNYSFSGFGEARSASLELAYKHFSKASHVMIADPDWKPSVETIDKAELDDSALVFRFMVFDRSGETRRYIDWCLLHRPGLKMRYALHEVLDIGHYAPKRITWVFHEIEQLGTWHKTV-GHGELFPHF 203          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5307.12633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G857_ECTSI1.340e-14561.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3NFA2_9STRA5.590e-7136.67Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A482RZ88_9ARCH1.600e-3240.22Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5307contigH-elongata_contig5307:6757..11553 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5307.12633.1mRNA_H-elongata_contig5307.12633.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5307 6730..11553 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5307.12633.1 ID=prot_H-elongata_contig5307.12633.1|Name=mRNA_H-elongata_contig5307.12633.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=332bp
MIVRDEEENLRANLPLWNDVASCYVFGVDDRTADGTVQAIREALPAKKPR
FVFFYTFEDFSQARNAVLRSTSHNFPGVSHVLIADADWRPQQETLDLSDL
DFDHGVFQFRIWDHSGHTTRLAGWLLRNDPGLMFKYSNAPSKLIKWQVAV
VESDSSWHATEHGHSRTAERFLFDMDLLELDYKDDPTDLHNLFYLGITTY
SYMETLIGKGTHEKTPELQRLIDSGMSYFLQAVDLYGDQEGLEFIWSSIR
WLAYGYHYFVGDDAEAERWYRKCIDYDVTRIDCEVFLSRLYLDTGDLDNA
WERAKVGLLYNYPMHRPLDYFYIFECFVPIQV
back to top