prot_H-elongata_contig52972.12623.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52972.12623.1
Unique Nameprot_H-elongata_contig52972.12623.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length366
Homology
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 291 bits (744), Expect = 6.800e-92
Identity = 196/379 (51.72%), Postives = 222/379 (58.58%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSM----GGAVSTPFSPGSSVRFYTLLRVLVPYLQRLRLREGWHGLRSLRDPFGRGGSAAALGVAXXXXXXXXXVALSPPVAI-VSMLDHDALPETRVDVRDDAEPEGEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAAIVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEP-RARYAILGVFSLVQAVGEAASACAXXXX--------ARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLYQYA 365
            AGKQTLGQEYC I L      GG  S+P S    ++ YT LRV VPYLQ  R+REGWHGLRSLRDPFG GG+A +L  A XXXXXXXX A++PPV I VS +        R            XXX                                  FL R L+  RR RPA+SG+LEWALR+HLA FYFDGR+AN+AMR  GARLAY R + E  R RYA+LG+  L+QA  EAA+A A            A SE  PR  EG    G G    D             +  G      RVPA T  +TPAD ALFP SRRRCSLCMS R+N AATPCGHLFCWEC++GWCQTNPECPLCRQP +PQSIVCLYQYA
Sbjct:   71 AGKQTLGQEYCGIDLVPSGRGGGRESSPLSR-RPLQAYTFLRVAVPYLQE-RMREGWHGLRSLRDPFGSGGAATSL--AAXXXXXXXXXAVAPPVGIAVSSVSGGTAAADRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXAFLRRVLAWARRRRPAMSGVLEWALRLHLAAFYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGGPSDLG-----------EGVGDTALPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQYA 433          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.880e-48
Identity = 128/364 (35.16%), Postives = 165/364 (45.33%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYLQRLRLREGWHGLRSLRDPFGRGGSAAALGVAXXXXXXXXXVALSPPVAIVSMLDHDALPETRVDVRDDAEPEGEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAAIVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLYQY 364
            AG+QT+GQEYCD+  S  G    P S  +    Y+L+ V  PYL   RL  GW  LR +R+PF R   AA +  A                A       +A   T V     A P+ +     A ++ S+                                         + +L W    HLA+F+ +GRYAN AMR A  RL Y RA+D P  RY ILGV  L +   E  +  A           R L G          + + G+         +A+    AS RVP ++   T A A      R RC+LCM PR++ AAT CGHLFCWEC++GWC+TNPECPLCRQPA PQSIVC+Y Y
Sbjct:   50 AGRQTVGQEYCDLMFSRNGLCDVPLSARAG---YSLVEVCWPYLLS-RLDTGWPRLRDIREPFDRHAEAARIRDAMRAHAAESESQQPTSAA-------EAAAVTPV-----APPDNDGSRDAAYSVCSATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAARVLRWLGAFHLALFFLNGRYANAAMRAARVRLMYNRAQDAPLPRYTILGVLMLARFGFEFGAQAA-----------RKLHG---------IIFSDGDGSGGXXXXXKAN---LASQRVPGLSGSDTEAAA-----RRHRCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHY 369          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A485LD12_9STRA (Aste57867_19380 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD12_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.370e-30
Identity = 70/200 (35.00%), Postives = 105/200 (52.50%), Query Frame = 0
Query:  166 RNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPA-VTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLYQY 364
            R   ++ G++    + HLA+F+ +GRY +++ RVAG R   ++   +P A++AILG   LV+A+    SAC     A                                   R   G   A+SR  A V  ++ PAD  + P+  ++C+LC++ R + + TPCGH+FCWEC++GWCQ+ PECPLCRQ   PQ + CLY Y
Sbjct:  219 RTGLSVDGIVHGLAQCHLALFFLNGRYFHISKRVAGLRYVLSQRLSQPFAQFAILGYMILVRAM---ISACLALPPAM----------------------------------RCLLGHQVANSRPAAMVEGKRVPADTGVSPKQTKKCALCLTERSHPSMTPCGHVFCWECIVGWCQSKPECPLCRQVVLPQDVKCLYNY 381          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: T0Q7Z6_SAPDV (RING-type domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q7Z6_SAPDV)

HSP 1 Score: 126 bits (316), Expect = 1.640e-29
Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 0
Query:  166 RNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAA---SACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLYQY 364
            R   +++  ++ A+ VHLA+FY  GRY ++A RVAG R   TR  D P A+++ILG   L++    +    SAC        E  PR L+  R           P +E                    P VT             ++R+C+LC++ R + A TPCGH+FCWEC++GWCQ  PECPLCRQ   PQ + C+Y Y
Sbjct:  196 RTGTSVTTWMQAAVAVHLALFYLHGRYFDMAKRVAGIRYILTRKLDAPHAQFSILGYLILLRLALSSVLGLSACLRTLLG-VEVAPRRLDQHR----------VPSDESR------------------PTVT-------------AQRKCALCLTERSHPAMTPCGHVFCWECIVGWCQNKPECPLCRQLVQPQDVKCIYSY 355          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A328E4H4_9ASTE (RING-type domain-containing protein n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328E4H4_9ASTE)

HSP 1 Score: 124 bits (311), Expect = 1.690e-28
Identity = 113/372 (30.38%), Postives = 156/372 (41.94%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYL-QRLRLREGWHGLRSLRDPFGR----GGSAAALGVAXXXXXXXXXVALSPPVAIVSMLDHDALPETRVDVRDDAEPEGEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAA----IVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXARSERDPRHLE-GRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLY 362
            AGKQTLG+EYCDI   + G    P +P     F    +  VPYL +R   R    G+ +L DPF      GG++A+ G                                RV+    +E             + S R    F S  + +LRR W  A      VF            P    +L+  +R +L  FYF+G Y + + R +G R  +   +   R RY ILGVF L+Q    AA        +      +    G   +  GN  V    EE ++   G +       SS     T EK    +      + +C+LC+S RQ+  ATPCGH+FCW C++ WC   PECPLCR PA+  S+VCLY
Sbjct:   91 AGKQTLGEEYCDI-TQVAGPFGVPPTPARRALFI-FYQTTVPYLAERFSSRLASEGI-TLDDPFDDDYSFGGASASSG--------------------------------RVEASTTSE-----------TTSFSSRESLSFFSRLKAKLRRCWLHAVQRWPSVF------------PLAREILQLIIRANLMFFYFEGLYYHSSKRASGIRYVFIGKQANQRPRYQILGVFLLIQLCVLAAERLRRSSLSSLSASVQQTPLGTYQYSPGN-CVPILDEEGNLITGGSEKGSYVFQSS----STSEKQSQTS-----GQSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A2Z4HN89_IPOPC (Peroxisome biogenesis factor 10 n=4 Tax=Ipomoea TaxID=4119 RepID=A0A2Z4HN89_IPOPC)

HSP 1 Score: 119 bits (297), Expect = 1.610e-26
Identity = 110/368 (29.89%), Postives = 157/368 (42.66%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYL-QRLRLREGWHGLRSLRDPFGRGGSAAALGVAXXXXXXXXXVALSPPVAIVSMLDHDALPETRVDVRDDAEPEGEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAAIVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQ-----AVGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLY 362
            AGKQTLG+EYCDI   + G    P +P     F    +  VPYL +R+  R    G+ +L DPF                        S P ++ S L       T  ++                A +S+ R      S  + ++R  W  A   +      SV    P    +L+  +R +L  FYF+G Y +L+ R +G R  +       R RY ILG F LVQ     A G    +      A +++ P     +   GRG   V    EE ++  A  +           P+ T E   +  +       +C+LC+S RQ+  ATPCGH+FCW C++ WC   PECPLCR PA+  S+VCLY
Sbjct:   94 AGKQTLGEEYCDI-TQVAGPYGLPPTPARRALFI-FYQTAVPYLAERVSSRIASQGI-TLDDPFDD----------------------SYPFSVASELSSRVEASTTTEI----------------ASSSTSRAHPSVLSRFKTKIRECWLYAVQRW-----PSV---LPLAREILQLVIRANLMFFYFEGLYYHLSKRASGIRYVFIGKPTNQRPRYQILGFFLLVQLCILAAEGLRRRSNLSSISASAQQTPFGTY-QTSSGRG---VPVLNEEGNLITADSEKGSFVS----EPSSTSESQASGLS-------KCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 397          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: UPI00109F5807 (peroxisome biogenesis factor 10 isoform X1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109F5807)

HSP 1 Score: 118 bits (295), Expect = 3.290e-26
Identity = 108/368 (29.35%), Postives = 152/368 (41.30%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYL-QRLRLREGWHGLRSLRDPFGRGGSAAALGVAXXXXXXXXXVALSPPVAIVSMLDHDALPETRVDVRDDAEPE--GEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAAIVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXAR--SERDPRHLEGRRDF-GRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLY 362
            AG+QTLG+EYCD+   +  +   P +P   + F    + +VPYL +RL  R   HG+      FG                                     L E+    R+ A+P   G     G P    S+  +   G          WF A   +            P      + ALR +L  FYF+G Y +++ R AG R  +       R RY ILG+F LVQ    AA        +   S   P  L G +   GRG   ++  G    + DA      + K+S    ++T E         P S  +C+LC+S RQ+  AT CGH+FCW C++ WC   PECPLCR P +  S+VC+Y
Sbjct:  103 AGQQTLGEEYCDLS-QVADSYGLPPTPARRIVFI-FYQTVVPYLAERLSSRMTAHGMTMDDFQFGE------------------------------------LHESNYLRRNQAQPSSSGSSSSRGLPTSAISKMKEKFVGL---------WFWAVQKWP--------MVLPFAREAAQLALRANLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRLRYQILGIFLLVQLCILAAEGLRRSNFSSIASSVHPSSLGGHQSSTGRGLPVLNEDG--NLITDA-----AIKKSSLGSDSLTTESQ------VPVSISKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIY 402          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A5D6XGT1_9STRA (RING-type domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGT1_9STRA)

HSP 1 Score: 117 bits (293), Expect = 5.990e-26
Identity = 75/201 (37.31%), Postives = 105/201 (52.24%), Query Frame = 0
Query:  170 AISGMLEWALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVP-AVTPEKTPAD----AALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNP-ECPLCRQPASPQSIVCLYQY 364
            +++ +  WA ++HLA FY   +Y +L+ R++  +  + R+   P    ++LG    ++    A           ++R  RH             V    ++K V  AG      A  S RVP AVT     +D    AAL  RSRR+C+LC+  R + AATPCGH+FCWEC++GWCQ N  ECPLCRQ A PQ I CLY Y
Sbjct:  224 SVACVKAWASQLHLASFYVSAKYFHLSKRLSNVQYVFVRSDLTPGINLSLLGYLMFLRLFVTAV--------VETKRLRRH-------------VKQDAKQKLVARAGLNPAVYAH-SDRVPTAVTVAAGASDGAEAAALSRRSRRKCALCLGDRTSPAATPCGHVFCWECIVGWCQKNKAECPLCRQEAHPQQIKCLYNY 402          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: A0A6I9TKZ1_SESIN (peroxisome biogenesis factor 10 isoform X1 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKZ1_SESIN)

HSP 1 Score: 115 bits (289), Expect = 2.010e-25
Identity = 109/369 (29.54%), Postives = 153/369 (41.46%), Query Frame = 0
Query:    1 AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYL-QRLRLREGWHGLRSLRDPFGRGGSAAALGVAXXXXXXXXXVALSPPVAIVSMLDHDALPETRVDVRDDAEPEGEXXXAGAPALTSSRRPQTDFGSGGRCRLRRRWFRAAIVFLGRALSSVRRNRPAISGMLEW---ALRVHLAVFYFDGRYANLAMRVAGARLAYTRAKDEPRARYAILGVFSLVQA---VGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPADAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLY 362
            AGKQTLG+EYCDI   + G    P +P     F    +   PY+ +R+  R    G+ ++ D                             +    ++D++ +  +++     AE       +G P    SR                   +A I   G  L +VRR    +    E     LR +L  FYF+G Y +L+ R AG R  +       R RY ILGVF LVQ      E          A S +   H   +   GRG   ++  G      D+G+        SS V   TP      + +      +C+LC+S RQN  ATPCGH+FCW C++ WC   PECPLCR PA+  S+VCLY
Sbjct:   93 AGKQTLGEEYCDI-TQVAGPYGLPPTPARRSLFI-FYQTAFPYIAERISSRIASQGI-TMAD-----------------------------LLSDDIIDNETISNSQIQSSASAEMSSSFN-SGVPLSALSR------------------LKARIT--GVWLYAVRRWPSVLPFARECFMLVLRANLMFFYFEGLYYHLSKRAAGIRYVFIGKPTNQRPRYQILGVFLLVQLCIIAAEGLRRSNLSTFATSFQQTSHGAYQTSAGRGLPVLNEEGN-LITEDSGK--------SSWVHESTPTSESQASGVS-----KCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLY 394          
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Match: W4GFD0_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFD0_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.810e-25
Identity = 69/202 (34.16%), Postives = 106/202 (52.48%), Query Frame = 0
Query:  170 AISGMLEWALRVHLAVFYFDGRYANLAMRVAGAR--LAYTRAKDEPRARYAILGVFSLVQAVGEAASACAXXXXARSERDPRHLEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPA----VTPEKTPADA-ALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCRQPASPQSIVCLYQY 364
            A+SG+L+    +H+A+F+  G Y +L+ R+AG R  L+Y  + +   A+++ILG   L++A   A                              +   P   ++V    R A   A ++ RVP     +TP   P    +  P+  ++C+LC++ R + +ATPCGHLFCW+C++GWCQ+ PECPLCRQ   PQ I CLY Y
Sbjct:  102 AVSGLLQ----LHVALFFLRGTYLHLSKRMAGIRYILSYRPSPNTSFAQFSILGYMILIRAALTA------------------------------SFTLPTIVRAVMGT-RLAPPSAASTHRVPCLAVPITPNPPPRQLPSSSPQRIKKCALCLAERSHPSATPCGHLFCWDCIVGWCQSKPECPLCRQLVLPQDIKCLYNY 268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52972.12623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU68_9PHAE6.800e-9251.72RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLL0_9STRA8.880e-4835.16Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A485LD12_9STRA1.370e-3035.00Aste57867_19380 protein n=1 Tax=Aphanomyces stella... [more]
T0Q7Z6_SAPDV1.640e-2935.64RING-type domain-containing protein n=2 Tax=Saprol... [more]
A0A328E4H4_9ASTE1.690e-2830.38RING-type domain-containing protein n=3 Tax=Cuscut... [more]
A0A2Z4HN89_IPOPC1.610e-2629.89Peroxisome biogenesis factor 10 n=4 Tax=Ipomoea Ta... [more]
UPI00109F58073.290e-2629.35peroxisome biogenesis factor 10 isoform X1 n=2 Tax... [more]
A0A5D6XGT1_9STRA5.990e-2637.31RING-type domain-containing protein n=1 Tax=Pythiu... [more]
A0A6I9TKZ1_SESIN2.010e-2529.54peroxisome biogenesis factor 10 isoform X1 n=2 Tax... [more]
W4GFD0_9STRA2.810e-2534.16RING-type domain-containing protein n=1 Tax=Aphano... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 312..349
e-value: 2.9E-6
score: 36.8
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 312..350
score: 12.902
IPR006845Pex, N-terminalPFAMPF04757Pex2_Pex12coord: 2..228
e-value: 8.2E-9
score: 35.4
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 309..353
e-value: 6.9E-10
score: 38.6
NoneNo IPR availablePANTHERPTHR23350:SF0PEROXISOME BIOGENESIS FACTOR 10coord: 2..364
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 2..364
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 311..356
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 287..358
e-value: 2.0E-13
score: 51.5
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 327..336

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52972contigH-elongata_contig52972:354..2723 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52972.12623.1mRNA_H-elongata_contig52972.12623.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52972 354..2723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52972.12623.1 ID=prot_H-elongata_contig52972.12623.1|Name=mRNA_H-elongata_contig52972.12623.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=366bp
AGKQTLGQEYCDIGLSMGGAVSTPFSPGSSVRFYTLLRVLVPYLQRLRLR
EGWHGLRSLRDPFGRGGSAAALGVARARARARARVALSPPVAIVSMLDHD
ALPETRVDVRDDAEPEGEGRGAGAPALTSSRRPQTDFGSGGRCRLRRRWF
RAAIVFLGRALSSVRRNRPAISGMLEWALRVHLAVFYFDGRYANLAMRVA
GARLAYTRAKDEPRARYAILGVFSLVQAVGEAASACAAAAAARSERDPRH
LEGRRDFGRGNEAVDAPGEEKSVRDAGRQADGLAKASSRVPAVTPEKTPA
DAALFPRSRRRCSLCMSPRQNAAATPCGHLFCWECVIGWCQTNPECPLCR
QPASPQSIVCLYQYA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR006845Pex_N
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS