prot_H-elongata_contig52968.12622.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52968.12622.1
Unique Nameprot_H-elongata_contig52968.12622.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
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BLAST of mRNA_H-elongata_contig52968.12622.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 4.710e-26
Identity = 57/101 (56.44%), Postives = 75/101 (74.26%), Query Frame = 0 
Query:    1 MSLAEREQCSLLDNFWGLPANWARQQKAMVEMETEDHYSEALRAKIKEEERYALWDEEDLKMRETRNVVKEILENAALEEYLEMFYSAPSADLVIDYRWPT 101
            MS AE EQC+L D+FWGL AN   Q +A   ME ED  S  +RA+IK+EERY LW++ED + RETR+ V+E LE+ A  EYLE+FY+APSA++ ++Y WPT
Sbjct:  519 MSKAEGEQCAL-DDFWGLVANQVEQAEATAAMEREDLLSAQIRARIKKEERYRLWEQEDRRKRETRSAVREHLEDHARREYLEIFYNAPSAEMAMNYTWPT 618
[Close]
BLAST of mRNA_H-elongata_contig52968.12622.1 vs. uniprot
Match: A0A6H5JU28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU28_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 2.640e-24
Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 0 
Query:    1 MSLAEREQCSLLDNFWGLPANWARQQKAMVEMETEDHYSEALRAKIKEEERYALWDEEDLKMRETRNVVKEILENAALEEYLE--MFYSAPSADLVIDYRWPT 101
            MS AE EQC+L D+FWGL AN   Q +A   ME ED  S  +RA+IK+EERY LW++ED + RETR+ V+E LE+ A  EYLE  +FY+APSA++ ++Y WPT
Sbjct:   99 MSKAEGEQCAL-DDFWGLVANQVEQAEATAAMEREDLLSAQIRARIKKEERYRLWEQEDRRKRETRSAVREHLEDHARREYLESEIFYNAPSAEMAMNYTWPT 200
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52968.12622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LFK6_ECTSI4.710e-2656.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JU28_9PHAE2.640e-2455.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52968contigH-elongata_contig52968:2396..3273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52968.12622.1mRNA_H-elongata_contig52968.12622.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52968 2396..3303 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52968.12622.1 ID=prot_H-elongata_contig52968.12622.1|Name=mRNA_H-elongata_contig52968.12622.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
MSLAEREQCSLLDNFWGLPANWARQQKAMVEMETEDHYSEALRAKIKEEE
RYALWDEEDLKMRETRNVVKEILENAALEEYLEMFYSAPSADLVIDYRWP
T
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