prot_H-elongata_contig52968.12621.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52968.12621.1
Unique Nameprot_H-elongata_contig52968.12621.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length345
Homology
BLAST of mRNA_H-elongata_contig52968.12621.1 vs. uniprot
Match: A0A6H5JU28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU28_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 6.670e-64
Identity = 169/388 (43.56%), Postives = 210/388 (54.12%), Query Frame = 0
Query:    1 ESVSICPLHTFQGKKVHSLLWAQDLFVPPRTLVEPCAKAGFSSV----GGASGAHPSHPNAR-----------LGRSAHAGLLRAATLPPMVNATTRDLPPLRQLQGSYSGRGARKRSTGELKRPMVLKPGAPGQPLLSSFARKFEARFYA-TRSGEPEPETD--ELQQRVGRLSTGGRRIDIACDGGSRG--IDG-RYWSAELQGLSVDGPR----------GLGCGSQ-----------GHDSYDEQGAI-DLVPEREEKFLTTIFGMVDTRDRGEVRLDEVLFHMTENAQVKSLLRQVTLWTMIKTRRWEWLEELFAAQASRTLTLSALLRYSQSLHEEKGVPRKHVRLPMALRKEDVARRDARSKRLLPADLVEGREVEALFMK 345
            E  S  P H F+GKK H +  A+D FVPPR L EP  K G  SV     GA+GA  + P  R            G +A +G+ +A  LPP++       P    + G  +  G    S    KRP    P       +SSF RK  AR    +R  E E E    E Q R   L  G + +D   DGG +G  I G RY      G+S    +          G+ C  Q           GH  +D+ G + +LVPE EEK LT +FG++D R RGEVRLDEVLF+MTENAQVKS+L+QV LW + KTRRW W++EL  AQ  RTLTL ALL +S+SLHEE  VPRKH+RL   LR+  V R+D RSKRLLPA+ VEG EVEAL+ K
Sbjct:  283 EGSSTRPFHVFRGKKTHQVFPAKDCFVPPRHLSEPTTKHGLISVHALTAGAAGAAGACPAGREKTAGPETVDPAGANAPSGVSKAVHLPPLLETPGEGWPAAVPIAGRAAVTGEPLSSN---KRP----PSWQRPRSVSSFERKLAARRQQWSREAEEEAEERAFEEQWRTQELLLGVQGLD---DGGWQGGGIAGYRYKVGGTAGISQGSTQAGRRCHGNGGGVMCTRQRRVRTRGWRDRGHHDWDDDGKVTELVPELEEKLLTEMFGILDARHRGEVRLDEVLFYMTENAQVKSILKQVPLWMLTKTRRWAWVDELLDAQPGRTLTLPALLAFSRSLHEESHVPRKHLRLATELREGGVERKDVRSKRLLPAEFVEGAEVEALYRK 660          
BLAST of mRNA_H-elongata_contig52968.12621.1 vs. uniprot
Match: D8LFK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFK6_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.990e-60
Identity = 165/388 (42.53%), Postives = 198/388 (51.03%), Query Frame = 0
Query:    1 ESVSICPLHTFQGKKVHSLLWAQDLFVPPRTLVEPCAKAGFSSVGGASGAHPSHPNARLGR--------------SAHAGLLRAATLPPMVNATTRDLPPLRQLQGSYSGRGARKRSTGELKRPMVLKPGAPGQPLLSSFARKFEARFYATRSGEPEPETDEL----QQRVGRLSTGGRRIDIACDGGSRG---IDGRYWSAELQGLSVDGPR-GLGCGSQG---------------------HDSYDEQGAIDLVPEREEKFLTTIFGMVDTRDRGEVRLDEVLFHMTENAQVKSLLRQVTLWTMIKTRRWEWLEELFAAQASRTLTLSALLRYSQSLHEEKGVPRKHVRLPMALRKEDVARRDARSKRLLPADLVEGREVEALFMK 345
            E  S  P H F GKK H +  A+D FVPPR L EP  K G  SV   +           GR              +A +G+ +A  LPP++       P      G  +  G    S    KRP    P       +SSF RK  AR     S E E E +E     Q+R   L  G + ID   DGG +G      RY   E   +S    R G  C   G                      D  D++   +LVPE EEK LT ++GM+D R RGEVRLDEVLF+MTENAQVKS+L+QV LW + KTRRW W++EL AAQ  RTLTL ALL +S+SLHEE  VPRKH+RL   L +  V R+D RSKRLLPADLVEG EVEALF K
Sbjct:  701 EGSSTRPFHVFCGKKTHQVFPARDCFVPPRHLSEPTTKHGLISVHALAAXXXXXXXCPAGREKTAGPETVDPAGANAPSGVSKAVHLPPLLETHGEGWPAAVPSAGRVAATGEPLSSN---KRP----PSWQRPRSVSSFERKLAARRQQW-SREAEEEAEERAFAEQRRTQELLLGVQGID---DGGWQGGGRAGYRYKVGETAAISPGSTRAGRRCHRNGGGVRFARQRRAXXXXXXXXXXXDWGDDEKVTELVPEVEEKLLTEMYGMLDARHRGEVRLDEVLFYMTENAQVKSILKQVPLWMLTKTRRWAWVDELLAAQPGRTLTLPALLAFSRSLHEESHVPRKHLRLATELGEGGVERKDVRSKRLLPADLVEGAEVEALFRK 1077          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52968.12621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU28_9PHAE6.670e-6443.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFK6_ECTSI1.990e-6042.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52968contigH-elongata_contig52968:703..2185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52968.12621.1mRNA_H-elongata_contig52968.12621.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52968 703..2185 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52968.12621.1 ID=prot_H-elongata_contig52968.12621.1|Name=mRNA_H-elongata_contig52968.12621.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=345bp
ESVSICPLHTFQGKKVHSLLWAQDLFVPPRTLVEPCAKAGFSSVGGASGA
HPSHPNARLGRSAHAGLLRAATLPPMVNATTRDLPPLRQLQGSYSGRGAR
KRSTGELKRPMVLKPGAPGQPLLSSFARKFEARFYATRSGEPEPETDELQ
QRVGRLSTGGRRIDIACDGGSRGIDGRYWSAELQGLSVDGPRGLGCGSQG
HDSYDEQGAIDLVPEREEKFLTTIFGMVDTRDRGEVRLDEVLFHMTENAQ
VKSLLRQVTLWTMIKTRRWEWLEELFAAQASRTLTLSALLRYSQSLHEEK
GVPRKHVRLPMALRKEDVARRDARSKRLLPADLVEGREVEALFMK
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