prot_H-elongata_contig52898.12614.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52898.12614.1
Unique Nameprot_H-elongata_contig52898.12614.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: D8LRQ2_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ2_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 3.780e-39
Identity = 69/77 (89.61%), Postives = 69/77 (89.61%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEK------PKFAISDNLGFGGHNAALTFK 71
            MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEK      PK AISDNLGFGGHNAAL FK
Sbjct:  409 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEKVVPAVKPKVAISDNLGFGGHNAALAFK 485          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A836CDS1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.440e-30
Identity = 56/77 (72.73%), Postives = 63/77 (81.82%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG------EKPKFAISDNLGFGGHNAALTFK 71
            MMGHTLGAAGGLEA+VCAQVL+ GEIPPT NL+NP LE GCDLNYCP       EK ++AIS+NLGFGGHNA + FK
Sbjct:  390 MMGHTLGAAGGLEAVVCAQVLKSGEIPPTLNLDNPDLEAGCDLNYCPHTKVVPTEKIRYAISNNLGFGGHNACVAFK 466          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1XSM4_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM4_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.150e-27
Identity = 55/78 (70.51%), Postives = 61/78 (78.21%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEKP-------KFAISDNLGFGGHNAALTFK 71
            MMGHTLGAAGGLEA+V A+VL  G+IPPT NLENP LE GCDL+YCPGE         K A+SDNLGFGGHNAA+ FK
Sbjct:  378 MMGHTLGAAGGLEAVVLAKVLETGKIPPTANLENPDLEAGCDLDYCPGEMQQVDPKSIKAALSDNLGFGGHNAAVLFK 455          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0M182_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M182_9CRYP)

HSP 1 Score: 110 bits (275), Expect = 6.720e-27
Identity = 53/76 (69.74%), Postives = 61/76 (80.26%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 71
            MMGHTLGAAGGLEAIVCA+V++ G +PPT NLE P L+DGCDL+Y P      E+ + AISDNLGFGGHNAAL FK
Sbjct:  393 MMGHTLGAAGGLEAIVCAKVIKTGWVPPTLNLEQPDLDDGCDLDYTPNKAVKLERVRAAISDNLGFGGHNAALVFK 468          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1GZB6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZB6_HEMAN)

HSP 1 Score: 103 bits (257), Expect = 2.910e-26
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGE-----KPKFAISDNLGFGGHNAALTFK 71
            +MGHTL  AGGLEA VCA+V++ G IPPT NL+NP +EDGCDL+Y P E     + + AISDNLGFGGHNAAL F+
Sbjct:  107 VMGHTLAGAGGLEAAVCAKVIKTGVIPPTVNLDNPDIEDGCDLDYTPRESVTMDRVRAAISDNLGFGGHNAALVFR 182          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1DVF7_HEMAN (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVF7_HEMAN)

HSP 1 Score: 103 bits (257), Expect = 2.400e-24
Identity = 49/76 (64.47%), Postives = 59/76 (77.63%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGE-----KPKFAISDNLGFGGHNAALTFK 71
            +MGHTL  AGGLEA VCA+V++ G IPPT NL+NP +EDGCDL+Y P E     + + AISDNLGFGGHNAAL F+
Sbjct:  403 VMGHTLAGAGGLEAAVCAKVIKTGVIPPTVNLDNPDIEDGCDLDYTPRESVTMDRVRAAISDNLGFGGHNAALVFR 478          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0STP5_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STP5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.500e-24
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG--------EKPKFAISDNLGFGGHNAALTFK 71
            M+GH+LGAAG +EA+VCAQ+L  G +PPT NL+NP +E GCDL+Y P         + PK  ISDNLGFGGHNAAL FK
Sbjct:  378 MIGHSLGAAGAIEAVVCAQILDQGIVPPTINLDNPDIEAGCDLDYVPNVAHHYAKADIPKVVISDNLGFGGHNAALAFK 456          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0HBR4_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HBR4_9CRYP)

HSP 1 Score: 98.2 bits (243), Expect = 3.460e-23
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 71
            M+GH LGAAGGLEA++CA+V++ G IPPT N + P +EDGCDL+Y        E+ + AISDNLGFGGHNAA+ FK
Sbjct:  216 MIGHCLGAAGGLEAVICAKVVKTGWIPPTLNCDEPDIEDGCDLDYTRHKAVKMERVRAAISDNLGFGGHNAAIVFK 291          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A6S9RH85_CHRCT (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RH85_CHRCT)

HSP 1 Score: 97.4 bits (241), Expect = 3.890e-22
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 71
            M GHTLGAAGG+EA VC ++++ G++PPT N  NP  +  CDLNY P      EKP+ AISDNLGFGGHNAAL FK
Sbjct:  396 MTGHTLGAAGGIEAAVCVKMMQTGDVPPTINYNNP--DPDCDLNYVPNQAIKIEKPRAAISDNLGFGGHNAALVFK 469          
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S4PIL2_GUITH (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PIL2_GUITH)

HSP 1 Score: 96.7 bits (239), Expect = 8.300e-22
Identity = 45/76 (59.21%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    1 MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 71
            M+GH LGAAGGLEA++CA+ ++ G IPPT N + P +EDGCDL+Y        E+ + AISDNLGFGGHNAA+ FK
Sbjct:  426 MIGHCLGAAGGLEAVICAKAVKTGWIPPTLNCDEPDIEDGCDLDYTRHKAVKMERVRAAISDNLGFGGHNAAIVFK 501          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ2_ECTSI3.780e-3989.61Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A836CDS1_9STRA9.440e-3072.73Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A7S1XSM4_9STRA1.150e-2770.513-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=... [more]
A0A7S0M182_9CRYP6.720e-2769.74Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A7S1GZB6_HEMAN2.910e-2664.47Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1DVF7_HEMAN2.400e-2464.47Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A7S0STP5_9STRA5.500e-2460.763-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=... [more]
A0A7S0HBR4_9CRYP3.460e-2360.53Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A6S9RH85_CHRCT3.890e-2261.84Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]
A0A7S4PIL2_GUITH8.300e-2259.21Beta-ketoacyl-[acyl-carrier-protein] synthase I n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 1..71
e-value: 6.4E-16
score: 60.0
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 1..70
IPR014031Beta-ketoacyl synthase, C-terminalPFAMPF02801Ketoacyl-synt_Ccoord: 1..32
e-value: 2.9E-7
score: 30.5
IPR000794Beta-ketoacyl synthasePANTHERPTHR11712POLYKETIDE SYNTHASE-RELATEDcoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52898contigH-elongata_contig52898:848..1245 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52898.12614.1mRNA_H-elongata_contig52898.12614.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52898 848..1272 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52898.12614.1 ID=prot_H-elongata_contig52898.12614.1|Name=mRNA_H-elongata_contig52898.12614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEK
PKFAISDNLGFGGHNAALTFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR014031Ketoacyl_synth_C
IPR000794Beta-ketoacyl_synthase