mRNA_H-elongata_contig52898.12614.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: D8LRQ2_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRQ2_ECTSI) HSP 1 Score: 159 bits (403), Expect = 4.200e-45 Identity = 78/86 (90.70%), Postives = 78/86 (90.70%), Query Frame = 1
Query: 1 QVYISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEK------PKFAISDNLGFGGHNAALTFK 240
QVYISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEK PK AISDNLGFGGHNAAL FK
Sbjct: 400 QVYISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEKVVPAVKPKVAISDNLGFGGHNAALAFK 485
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A836CDS1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDS1_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.830e-34 Identity = 63/86 (73.26%), Postives = 71/86 (82.56%), Query Frame = 1
Query: 1 QVYISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG------EKPKFAISDNLGFGGHNAALTFK 240
+ YISSTKSMMGHTLGAAGGLEA+VCAQVL+ GEIPPT NL+NP LE GCDLNYCP EK ++AIS+NLGFGGHNA + FK
Sbjct: 381 KAYISSTKSMMGHTLGAAGGLEAVVCAQVLKSGEIPPTLNLDNPDLEAGCDLNYCPHTKVVPTEKIRYAISNNLGFGGHNACVAFK 466
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1XSM4_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM4_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.230e-31 Identity = 61/84 (72.62%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEKP-------KFAISDNLGFGGHNAALTFK 240
ISSTKSMMGHTLGAAGGLEA+V A+VL G+IPPT NLENP LE GCDL+YCPGE K A+SDNLGFGGHNAA+ FK
Sbjct: 372 ISSTKSMMGHTLGAAGGLEAVVLAKVLETGKIPPTANLENPDLEAGCDLDYCPGEMQQVDPKSIKAALSDNLGFGGHNAAVLFK 455
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0M182_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M182_9CRYP) HSP 1 Score: 120 bits (301), Expect = 1.990e-30 Identity = 59/82 (71.95%), Postives = 67/82 (81.71%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 240
ISSTKSMMGHTLGAAGGLEAIVCA+V++ G +PPT NLE P L+DGCDL+Y P E+ + AISDNLGFGGHNAAL FK
Sbjct: 387 ISSTKSMMGHTLGAAGGLEAIVCAKVIKTGWVPPTLNLEQPDLDDGCDLDYTPNKAVKLERVRAAISDNLGFGGHNAALVFK 468
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1GZB6_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GZB6_HEMAN) HSP 1 Score: 113 bits (283), Expect = 4.990e-30 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGE-----KPKFAISDNLGFGGHNAALTFK 240
ISSTKS+MGHTL AGGLEA VCA+V++ G IPPT NL+NP +EDGCDL+Y P E + + AISDNLGFGGHNAAL F+
Sbjct: 101 ISSTKSVMGHTLAGAGGLEAAVCAKVIKTGVIPPTVNLDNPDIEDGCDLDYTPRESVTMDRVRAAISDNLGFGGHNAALVFR 182
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S1DVF7_HEMAN (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVF7_HEMAN) HSP 1 Score: 113 bits (283), Expect = 7.740e-28 Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGE-----KPKFAISDNLGFGGHNAALTFK 240
ISSTKS+MGHTL AGGLEA VCA+V++ G IPPT NL+NP +EDGCDL+Y P E + + AISDNLGFGGHNAAL F+
Sbjct: 397 ISSTKSVMGHTLAGAGGLEAAVCAKVIKTGVIPPTVNLDNPDIEDGCDLDYTPRESVTMDRVRAAISDNLGFGGHNAALVFR 478
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0HBR4_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HBR4_9CRYP) HSP 1 Score: 108 bits (269), Expect = 7.370e-27 Identity = 52/82 (63.41%), Postives = 64/82 (78.05%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 240
ISSTKSM+GH LGAAGGLEA++CA+V++ G IPPT N + P +EDGCDL+Y E+ + AISDNLGFGGHNAA+ FK
Sbjct: 210 ISSTKSMIGHCLGAAGGLEAVICAKVVKTGWIPPTLNCDEPDIEDGCDLDYTRHKAVKMERVRAAISDNLGFGGHNAAIVFK 291
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S0STP5_9STRA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0STP5_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.200e-26 Identity = 53/85 (62.35%), Postives = 63/85 (74.12%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG--------EKPKFAISDNLGFGGHNAALTFK 240
ISS KSM+GH+LGAAG +EA+VCAQ+L G +PPT NL+NP +E GCDL+Y P + PK ISDNLGFGGHNAAL FK
Sbjct: 372 ISSIKSMIGHSLGAAGAIEAVVCAQILDQGIVPPTINLDNPDIEAGCDLDYVPNVAHHYAKADIPKVVISDNLGFGGHNAALAFK 456
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A6S9RH85_CHRCT (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RH85_CHRCT) HSP 1 Score: 107 bits (266), Expect = 1.790e-25 Identity = 52/82 (63.41%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 240
+SSTKSM GHTLGAAGG+EA VC ++++ G++PPT N NP + CDLNY P EKP+ AISDNLGFGGHNAAL FK
Sbjct: 390 VSSTKSMTGHTLGAAGGIEAAVCVKMMQTGDVPPTINYNNP--DPDCDLNYVPNQAIKIEKPRAAISDNLGFGGHNAALVFK 469
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Match: A0A7S4PIL2_GUITH (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PIL2_GUITH) HSP 1 Score: 106 bits (265), Expect = 3.000e-25 Identity = 51/82 (62.20%), Postives = 63/82 (76.83%), Query Frame = 1
Query: 10 ISSTKSMMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPG-----EKPKFAISDNLGFGGHNAALTFK 240
ISSTKSM+GH LGAAGGLEA++CA+ ++ G IPPT N + P +EDGCDL+Y E+ + AISDNLGFGGHNAA+ FK
Sbjct: 420 ISSTKSMIGHCLGAAGGLEAVICAKAVKTGWIPPTLNCDEPDIEDGCDLDYTRHKAVKMERVRAAISDNLGFGGHNAAIVFK 501 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52898.12614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52898.12614.1 >prot_H-elongata_contig52898.12614.1 ID=prot_H-elongata_contig52898.12614.1|Name=mRNA_H-elongata_contig52898.12614.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp MMGHTLGAAGGLEAIVCAQVLRHGEIPPTKNLENPALEDGCDLNYCPGEKback to top mRNA from alignment at H-elongata_contig52898:848..1272- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52898.12614.1 ID=mRNA_H-elongata_contig52898.12614.1|Name=mRNA_H-elongata_contig52898.12614.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=425bp|location=Sequence derived from alignment at H-elongata_contig52898:848..1272- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52898:848..1272- >mRNA_H-elongata_contig52898.12614.1 ID=mRNA_H-elongata_contig52898.12614.1|Name=mRNA_H-elongata_contig52898.12614.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=426bp|location=Sequence derived from alignment at H-elongata_contig52898:848..1272- (Himanthalia elongata Himel1 dioecious)back to top |