prot_H-elongata_contig116008.1260.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig116008.1260.1
Unique Nameprot_H-elongata_contig116008.1260.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig116008.1260.1 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.290e-20
Identity = 39/50 (78.00%), Postives = 45/50 (90.00%), Query Frame = 0 
Query:    1 MEGEDYVLLNSRAYDLLEGWYGGGPRFKRWVVSLGNGAHNELRVELFPVK 50
            MEGEDYVLL++RAY+LLE WYGGGPRFKRWVVSLG+ A  +L VELFPV+
Sbjct:  145 MEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVR 194
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116008.1260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0S6_ECTSI1.290e-2078.00Similar to ubiquitin specific peptidase 15 n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2230.10coord: 1..47
e-value: 1.7E-7
score: 32.8
IPR035927DUSP-like superfamilySUPERFAMILY143791DUSP-likecoord: 2..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig116008contigH-elongata_contig116008:406..558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig116008.1260.1mRNA_H-elongata_contig116008.1260.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig116008 406..558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig116008.1260.1 ID=prot_H-elongata_contig116008.1260.1|Name=mRNA_H-elongata_contig116008.1260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MEGEDYVLLNSRAYDLLEGWYGGGPRFKRWVVSLGNGAHNELRVELFPVK
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035927DUSP-like_sf