prot_H-elongata_contig52838.12604.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52838.12604.1
Unique Nameprot_H-elongata_contig52838.12604.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length118
Homology
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: D8LJB4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB4_ECTSI)

HSP 1 Score: 214 bits (545), Expect = 1.020e-63
Identity = 101/117 (86.32%), Postives = 108/117 (92.31%), Query Frame = 0
Query:    1 VQRVPGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMKDVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLRLR 117
            ++RVPGLY+ALL SADAMDAND+TGVRGPKQSCFVDIEKDL+RTLGM DV PL+NVLRC STFVPDVGYVQGMNFVCRS+LQVF DEEE FWVFVGMLQRF LR LY PGMPLLRLR
Sbjct:  418 IERVPGLYSALLMSADAMDANDMTGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLR 534          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A6H5JIN0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN0_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 4.870e-63
Identity = 102/117 (87.18%), Postives = 108/117 (92.31%), Query Frame = 0
Query:    1 VQRVPGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMKDVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLRLR 117
            ++RVPGLY+ALL SADAMDANDITGVRGPKQSCFVDIEKDL+RTLGM DV PL+NVLRC STFVPDVGYVQGMNFVCRS+LQVF DEEE FWVFVGMLQRF LR LY PGMPLLRLR
Sbjct:  648 IERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLR 764          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A078A7X3_STYLE (Tbc domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A7X3_STYLE)

HSP 1 Score: 81.6 bits (200), Expect = 1.220e-15
Identity = 38/89 (42.70%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   36 DIEKDLKRTL--------GMKDVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLRL 116
            +IEKD++RT         G ++   +  VLR ++  +P VGYVQG NF+  SL+++  +EE+VFW+F+ +L   GL +LY+ GMPLL+L
Sbjct:  852 EIEKDIERTFPNEKYFYKGSQNYYKMLRVLRAVAYHMPQVGYVQGFNFIAGSLMKLLKNEEQVFWMFINILTWRGLYQLYTDGMPLLKL 940          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A7S2PZU8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PZU8_9DINO)

HSP 1 Score: 67.8 bits (164), Expect = 2.940e-11
Identity = 37/100 (37.00%), Postives = 55/100 (55.00%), Query Frame = 0
Query:   27 RGPKQSCFVDIEKDLKRT------------LGMKDVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLL 114
            R  +  C  +I KD+ RT            LG + +L   NVLR  S F P+VGY QGM F+C  LL ++  EE+ F + + +L  + + +L+ PG+PLL
Sbjct:   13 RTEEAPCEAEIVKDINRTFPKHVLYRDKTGLGQQQLL---NVLRAYSVFNPEVGYCQGMGFICGVLL-MYMCEEDAFLMLISLLDNYRMSKLFMPGLPLL 108          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: M5GG67_DACPD (TBC-domain-containing protein n=1 Tax=Dacryopinax primogenitus (strain DJM 731) TaxID=1858805 RepID=M5GG67_DACPD)

HSP 1 Score: 68.6 bits (166), Expect = 4.650e-11
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 0
Query:    5 PGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMK--------DVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLR 115
            PGL+  LL+S DA     +            +IEKD++RT+ +          V  L+ VL+  S   P VGY QGMN +  SLL V+ DEEE FWV   +++R      +SP + + R
Sbjct: 1009 PGLFHELLSSHDAQTNISLE-----------EIEKDVRRTMPLNVFFGGDGVGVGKLRRVLQAYSWRNPAVGYCQGMNLITSSLLLVYADEEEAFWVLASIIERLLPADFFSPSLLVSR 1116          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: UPI0004407424 (TBC-domain-containing protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004407424)

HSP 1 Score: 67.4 bits (163), Expect = 1.180e-10
Identity = 40/119 (33.61%), Postives = 60/119 (50.42%), Query Frame = 0
Query:    5 PGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMK--------DVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLR 115
            PGL+  LL+S ++ D+ D             +IEKD+ RT+ +          +  L+ VL   S   P VGY QGMN +  +LL VF +EEE FWV   +++R      +SP + + R
Sbjct:  966 PGLFRDLLHSRESTDSVD------------AEIEKDVGRTMPLNIFFGGDGPGIDKLRRVLLAYSRRNPSVGYCQGMNLITSTLLLVFGNEEEAFWVLSAIIERLLPNDFFSPSLLVSR 1072          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A165DPS2_9BASI (TBC-domain-containing protein n=1 Tax=Calocera cornea HHB12733 TaxID=1353952 RepID=A0A165DPS2_9BASI)

HSP 1 Score: 67.0 bits (162), Expect = 1.610e-10
Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 0
Query:    5 PGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMK--------DVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLR 115
            PGL+  LL+S +           G       +IEKD++RT+ +          V  L+ VL+  S   P VGY QGMN +  SLL V+ DEEE FWV   +++R      +SP + + R
Sbjct: 1055 PGLFHELLSSHE-----------GEVNISLEEIEKDVRRTMPLNVFFGGDGVGVGKLRRVLQAYSWRNPAVGYCQGMNLITSSLLLVYADEEEAFWVLTSIIERLLPADFFSPSLLVSR 1162          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A167R413_CALVF (TBC-domain-containing protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167R413_CALVF)

HSP 1 Score: 67.0 bits (162), Expect = 1.610e-10
Identity = 41/119 (34.45%), Postives = 59/119 (49.58%), Query Frame = 0
Query:    5 PGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMK--------DVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLR 115
            PGL+  LL+S +           G       +IEKD++RT+ +          V  L+ VL+  S   P VGY QGMN +  SLL V+ DEEE FW+   +L+R      +SP + + R
Sbjct: 1007 PGLFHELLSSHE-----------GEINVSLEEIEKDVRRTMPLNVFFGGDGVGVGKLRRVLQAYSWRNPSVGYCQGMNLITSSLLLVYADEEEAFWMLTSILERLLPADFFSPSLLVSR 1114          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: K3WGG4_GLOUD (Rab-GAP TBC domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGG4_GLOUD)

HSP 1 Score: 66.6 bits (161), Expect = 1.830e-10
Identity = 28/63 (44.44%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   53 LKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGMPLLR 115
            ++ +LR   T+ P VGY QGMNF+ R L++V ++E +VFW+FVG+ +    R LY PG+ +L+
Sbjct:  191 IRRILRAYVTYNPRVGYCQGMNFLVRVLIEVTENEADVFWLFVGLSEPEINRNLYEPGLVVLQ 253          
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Match: A0A4Y9Z4U0_9AGAM (Rab-GAP TBC domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9Z4U0_9AGAM)

HSP 1 Score: 66.2 bits (160), Expect = 3.030e-10
Identity = 42/117 (35.90%), Postives = 57/117 (48.72%), Query Frame = 0
Query:    3 RVPGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMK--------DVLPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQRFGLRRLYSPGM 111
            R PGL+  LL  A+A       G  G       +IEKD+ RT+ +          V  L+ VL   S   P VGY QGMN V  +LL V+ DEE+ FWV   +++R      +SP +
Sbjct: 1291 REPGLFTDLLAEAEAEAKAHREG--GGDGGVVREIEKDVGRTMPLNVFFGGDGAGVEKLRRVLVAYSRRNPAVGYCQGMNLVASTLLLVYADEEDAFWVLAAIIERILPEDFFSPSL 1405          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52838.12604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJB4_ECTSI1.020e-6386.32Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JIN0_9PHAE4.870e-6387.18Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A078A7X3_STYLE1.220e-1542.70Tbc domain-containing protein n=1 Tax=Stylonychia ... [more]
A0A7S2PZU8_9DINO2.940e-1137.00Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
M5GG67_DACPD4.650e-1135.29TBC-domain-containing protein n=1 Tax=Dacryopinax ... [more]
UPI00044074241.180e-1033.61TBC-domain-containing protein n=1 Tax=Fomitiporia ... [more]
A0A165DPS2_9BASI1.610e-1034.45TBC-domain-containing protein n=1 Tax=Calocera cor... [more]
A0A167R413_CALVF1.610e-1034.45TBC-domain-containing protein n=1 Tax=Calocera vis... [more]
K3WGG4_GLOUD1.830e-1044.44Rab-GAP TBC domain-containing protein n=1 Tax=Glob... [more]
A0A4Y9Z4U0_9AGAM3.030e-1035.90Rab-GAP TBC domain-containing protein n=1 Tax=Dent... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 31..115
e-value: 1.6E-19
score: 70.4
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..117
score: 12.737
NoneNo IPR availableGENE3D1.10.8.270coord: 13..109
e-value: 7.1E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 30..100
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 31..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52838contigH-elongata_contig52838:273..1651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52838.12604.1mRNA_H-elongata_contig52838.12604.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52838 273..1651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52838.12604.1 ID=prot_H-elongata_contig52838.12604.1|Name=mRNA_H-elongata_contig52838.12604.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=118bp
VQRVPGLYAALLNSADAMDANDITGVRGPKQSCFVDIEKDLKRTLGMKDV
LPLKNVLRCMSTFVPDVGYVQGMNFVCRSLLQVFDDEEEVFWVFVGMLQR
FGLRRLYSPGMPLLRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf