mRNA_H-elongata_contig52713.12586.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: D7FS04_ECTSI (Triose phosphate/phosphate translocator, non-green plastid, chloroplast, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS04_ECTSI) HSP 1 Score: 372 bits (955), Expect = 3.260e-122 Identity = 218/440 (49.55%), Postives = 280/440 (63.64%), Query Frame = 2
Query: 152 IPTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQ-IRFSWLALLWALSSNLSNALRNVLVVKNIG--AAAAGKV------------SDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAAR-----------SRAGS------------EAGNRVAMDTS--GIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTRC 1351
+P PR + PP+Q+C LF LSY S+ FN+NNKRA +L PLPWT+A+LNL IGS +AL +WS K APWPRI QD+ VLV +G LH VSHL VVLGLGAG +SF+QT+KA+EACFTALLS++ LGQ + LP YLTL+PVV GV +T C Q +RFSW+ LL AL S+L NA+ NVL+VKNIG AAAAG+ S A +R ++++ S RS + R R+ GL L+ GDTYRL TVV A ++ P + +E SW LW+ A DA ++++ T +A S AGS A A++ + G W A R AV++G+ FNLFYD++FRLLGQLHP+THAVGNT+KRIVVI+AGA AFGGD GG RG +GS LAV+GVL +S++K RC
Sbjct: 5 LPNPRAPQPPPSQICGLFGLSYLCSMLFNINNKRALMLVPLPWTFAALNLSIGSVIALLSWSIKVAPWPRITRQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQ-------TMPLPVYLTLLPVVAGVALTCCGQGLRFSWVGLLSALVSHLPNAMGNVLIVKNIGPAAAAAGRRRSSLKTEASPPRSSSASFLRPTAANTAADPSFLSNPVARSASALANTRAGGEATTRRRRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRTTSADGSPPLLGEALLSAAGSGGDSXXXXXXRVSAVAEAAVEAAARGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVLGSALAVIGVLGYSLSKARC 437
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A6H5KHZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHZ8_9PHAE) HSP 1 Score: 322 bits (825), Expect = 8.120e-102 Identity = 197/413 (47.70%), Postives = 257/413 (62.23%), Query Frame = 2
Query: 176 RPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQ-IRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAAR-----------SRAGS-----EAGNRVAMDTS----GIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTRC 1351
R ++C LF LSY S+ FN+NNKRA +L PLPWT+A+LNL IGS +AL +WS K APWPRI QD+ VLV +G LH VSHL VVLGLGAG +SF+QT+KA+EACFTALLS++ LGQ + LP YLTL+PVV GV +T C Q +RFS + + S+ S+ LR A AG S + V +S+ +++R+ G++ R R+ GL L+ GDTYRL TVV A ++ P + +E SW LW+ A DA ++++ +A S GS AG RV+ G W A R AV++G+ FNLFYD++FRLLGQLHP+THAVGNT+KRIVVI+AGA AFGGD GG RG MGS LAV+GVL ++++K RC
Sbjct: 118 RRSLRICGLFGLSYLCSMLFNINNKRALMLVPLPWTFAALNLSIGSVVALLSWSIKIAPWPRITRQDLAVLVPMGFLHAVSHLTVVLGLGAGAVSFLQTVKAAEACFTALLSYLFLGQ-------TMPLPVYLTLLPVVAGVALTCCGQGLRFSLETEVSSPRSSGSSFLRPTA------ANTAGDPSFLSNPV--ARSASALANTRAGGEA----------------TTQRSRESGLASLARGDTYRLLTVVGAALIIPAAAYMERDSWPRLWRAAMDATAALVGRRTSADGLPPLPGEALLSAVGSVEDSSAAGGRVSAVAEAAVRGQWAEAFRRAVLAGVSFNLFYDLTFRLLGQLHPVTHAVGNTIKRIVVIAAGAFAFGGDLGGARGVMGSALAVIGVLGYNLSKARC 499
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S0L8Y2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L8Y2_9EUKA) HSP 1 Score: 157 bits (397), Expect = 3.820e-40 Identity = 115/399 (28.82%), Postives = 194/399 (48.62%), Query Frame = 2
Query: 155 PTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSG-IWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
P + G S FAL Y F++G+N+ NK+A P+P+T A+L LL+G W+ P++ +I L+ + L H +H+ V+ LGAG +SF +KASE +A LS ++LG + P+ YLTL+P+V GV + S ++ F+WL + A+ SNLS+ALR +L K +G G V + ++ + Y + T++A + + P+++ LE + A+S+ + A+ + TSG +W+ +L ++G + L+ +V+F LG+++P+THAVGNT+KR+V+I A AF G +GS++A+VG L +S+AK++
Sbjct: 67 PAEKDGLMETLTTGSFFALWYLFNIGYNIYNKKALNALPIPYTMATLQLLVGIPYCFFLWTTGIRKAPKLNAGNIKTLIPVSLGHLGTHIGAVVSLGAGAVSFTHIVKASEPVVSAALSAMLLGAF-YSPIT------YLTLLPIVGGVALASLKELSFTWLGFIAAMGSNLSSALRGILAKKTMG----GGVGEN--------------------------------------------------MNEANLYGVLTILAFLFMLPITLALEPPA----------AISAAVNAALASGA-------------TSGYLWKQSL----MAGAFYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFKTPISS-LGIIGSSIAIVGTLLYSLAKSK 376
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S4E311_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E311_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.580e-37 Identity = 116/386 (30.05%), Postives = 179/386 (46.37%), Query Frame = 2
Query: 197 SLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDT--YRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
S FAL Y F++G+N+ NK+A + P+PWT A+L L G L WS A P++ ++ L + H +H+ V+ LGAG +SF +KASE +A LS V+LG + P+ YLTL+P+V GV + S ++ F+WL A+ SN+S+ALR +L K +G G +G + +T Y + T++A +L PVS+ +E G+ VA TS A L + +SG + L+ +V+F LG+++P+THAVGNT+KR+V+I A AF G +GS++A+ G L +S+AK +
Sbjct: 136 SFFALWYLFNIGYNIYNKKALNVLPMPWTLATLQLFAGIPYVLLLWSTGARKTPKLTQDNLKTLFPVACGHLGTHIGAVISLGAGAVSFTHIVKASEPVVSAALSAVMLGAF-YSPIT------YLTLLPIVGGVALASLKELSFTWLGFGAAMLSNVSSALRGILAKKTMG--------------------------------------------------------GGVGENMNETNLYAVMTIMAFAVLLPVSLLVETPK------------------------AVGAAINTAVAAGTSKKDLAIL--SALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPIS-RLGVIGSSIAITGTLLYSLAKNK 431
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A4D9DFS8_9STRA (TPT domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DFS8_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.270e-36 Identity = 111/410 (27.07%), Postives = 179/410 (43.66%), Query Frame = 2
Query: 131 LQNRRRGIPTPRTGR----RPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
L +RR G TG + +V S F L Y F++G+N+ NK+A + PLPW + L +G W F P++ LQ++ ++ + +H ++H+ V+ LGAG +SF IKA+E FT+L S + L Q P+ Y +L+PV+ GV I S + +FSWLA A+ +N ++A R + A +T G+ + P + Y + T++A +++ PV+ +E W+ A S + + V SG+ F L+ +V+F L +HP+THAVGNT+KR+V+I A F +G +GS +A+ GVL +S+A R
Sbjct: 81 LVSRRGGAVATATGSDAGVKQTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIRKAPKLSLQNVKNILPVAAMHAMAHITAVISLGAGAVSFTHIIKAAEPAFTSLFSALFLKQYFS-PV------VYASLIPVMGGVAIASLTERKFSWLAFNSAMLANTASAGRGI-----------------------------------------------FAKKTMKEPQGQN-------MDPANLYAVLTILATLIMAPVAFLVEGSKLKPAWEAALAVTSQ----------------------------RQLINYIVSSGLYFYLYNEVAFLALDSVHPVTHAVGNTIKRVVIIGASILVFKNPIT-LQGYIGSAVAIAGVLLYSLAVER 400
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A6U3YGD8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YGD8_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.470e-34 Identity = 120/402 (29.85%), Postives = 182/402 (45.27%), Query Frame = 2
Query: 149 GIPTPRTGRR--PPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
G TP G+ +V FAL Y ++G+N+ NK+A + LPWT A+L L G W+ P + +++ L + H +H+ VL LGAG +SF +KASE +ALLS V L E L +P YL+L+PV+ GVG+ S ++ FSWLA A+ SN+++A R +L ++V +G MG L+ + Y + T++A +ML P+S+C+E DA S G+ G E A+ A+ SG+ + L+ +V+F L + P+THAVGNT+KR+V+I A F GA GS +A+ G L +S+AK +
Sbjct: 75 GGSTPDEGKSMAETLKVGGYFALWYILNIGYNIYNKKALNIVNLPWTIATLQLFAGIPYVFFLWTTGLRKKPILTTENVQNLAPSAICHLGTHVGAVLSLGAGAVSFTHIVKASEPVVSALLSAVFLK-------EFLPIPVYLSLLPVIGGVGLASLKELSFSWLAFSTAMLSNVASASRAIL--------------------------------------SKTVLSGK--------PMGEN-------LTAQNLYAVLTILAFVMLLPMSLCVETPMKIK---AVVDAAIS-----------GGTPMG-----------ELAMVSAL-SGVFYYLYNEVAFLALNAVAPVTHAVGNTIKRVVIILASVIVFRNPMTN-LGAAGSAIAIFGTLLYSLAKNK 389
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: F0YEM8_AURAN (TPT domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEM8_AURAN) HSP 1 Score: 137 bits (344), Expect = 5.420e-33 Identity = 111/386 (28.76%), Postives = 177/386 (45.85%), Query Frame = 2
Query: 197 SLFALSYAFSVGF--NVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDT--YRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAK 1342
S FAL Y F++G +++A PLPWT A++ L G W+ P++ ++ L + + H +H+ V+ LGAG +SF IKASE +A LS V+L + + P+ YLTL+P+V GVG+ S ++ F+WL A+ SN+S+ALR +L K +G G +G + +T Y + T++A +L PVS+C+E + AV S + AA D + + + +SG + L+ +V+F LG+++P+THAVGNT+KR+V+I A AF G +GS++A+ G L +S+AK
Sbjct: 38 SFFALWYLFNIGRARGAFSRKALNAMPLPWTLATVQLFAGIPYVALLWATGLRKAPKLSTDNVKTLFPVAMGHLGTHIGAVISLGAGAVSFTHIIKASEPVVSAALSAVML-KAYYSPIT------YLTLLPIVGGVGLASLKELSFTWLGFAAAMLSNVSSALRGILAKKTMG--------------------------------------------------------GGVGENMNETNLYAVLTIIAFAVLLPVSLCVETPA----------AVGSAIDAAVAA---------GHTKKDLAVL-------SALSGAYYYLYNEVAFLALGRVNPVTHAVGNTIKRVVIIIASVIAFNTPIS-TLGVVGSSIAITGTLLYSLAK 333
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: R1CRL8_EMIHU (TPT domain-containing protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CRL8_EMIHU) HSP 1 Score: 131 bits (330), Expect = 2.980e-31 Identity = 105/393 (26.72%), Postives = 174/393 (44.27%), Query Frame = 2
Query: 188 QVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRI--------VVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAK 1342
+V FAL + SVG+++ NKR + P PW+ A+ +++GS W PR+ L+ IG H + H+A +G AG++SF Q +KA+ + +LS A++L +L+L P++ GVG+ + ++ F+W ALL A++S+L+ ALRNVL +++GA S SDG L+P D + L T ++A + P ++ +E R+ LW A AG AG+ + +G +G+ F + +V+ + L +HP+THA+GNT++R+ V++ AF P GA GS LA+ G ++ K
Sbjct: 4 KVGGYFALWFLLSVGYSITNKRVTNALPCPWSVATATVVVGSLFVNLLWLTGLRRRPRLSAATYRALIPIGTFHAIGHIAGTVGTAAGSVSFAQVVKAAGPVYACVLSA-----------AAVSLRVWLSLAPIIAGVGLATLKELSFAWAALLGAVASDLALALRNVLSKQSMGAL-----------------------STSDGDK----------------------------LAPADMFGLLTCISAAVSVPAALLVEGRALPALWASAA----------------AGYPAGS---LGLAG-------QVAATGLYFYGYSEVAMKALNNVHPVTHAIGNTMRRVLPAREARVVIMLVCMVAFRTPMT-PLGACGSALAIGGSYLYATVK 307
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A2A9MAF1_9APIC (Apicoplast triosephosphate translocator APT1 n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MAF1_9APIC) HSP 1 Score: 129 bits (323), Expect = 7.120e-30 Identity = 111/403 (27.54%), Postives = 173/403 (42.93%), Query Frame = 2
Query: 158 TPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAPLPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGV--LVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIG--LSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAA--LRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
+P+ R Q+ L L YA +V +N++NK A ++ PLPW ++ L G AW+ P PR + + G+ H H+ V+ +G G +SF +KASE TALLS V L QV + YL+LVP+V GV + S ++ F+W+AL AL S L ++ R V A AM + L+G LS + Y L T+VA+++ P+++ E A++W AT+ G W L SG + ++ +V++ L +++ +THAV NT+KR+V+I A F P GA GS +A+ G L +S++KT+
Sbjct: 37 SPQEQTRFYVQLGGLLFLWYALNVMYNLDNKLALIMLPLPWMVSTFQLFFGWIFFCFAWATGLRPVPRFHSPGLFFTRIAPQGVCHFFVHIGAVISMGCGAVSFTHIVKASEPVLTALLSGVFLHQV-------FSWQTYLSLVPIVAGVVMASVTELSFTWMALGCALVSALGSSSRAVF---------------------------------------------------AKRAMANRK---LVGENLSSANMYALLTIVASLVSLPLALIAEGSQVASVWAAATN---------------------------PDGPWTRTQILTKMCFSGFWYYMYNEVAYLCLEKVNQVTHAVANTLKRVVIIVASVIFFQTPVT-PLGAAGSVVAIAGTLLYSLSKTK 350
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Match: A0A7S4JYS4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JYS4_9STRA) HSP 1 Score: 129 bits (325), Expect = 7.300e-30 Identity = 103/409 (25.18%), Postives = 183/409 (44.74%), Query Frame = 2
Query: 125 FSLQNRRRGIPTPRTGRRPPAQVCSLFALSYAFSVGFNVNNKRASLLAP-LPWTYASLNLLIGSAMALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVQTIKASEACFTALLSFVILGQVRHVPLEALTLPAYLTLVPVVVGVGITSCNQIRFSWLALLWALSSNLSNALRNVLVVKNIGAAAAGKVSDKAGVVRGCYGSSSSSDSRSDGKSPRSVKTGSIASRTATPAMGRERKGGLIGLSPGDTYRLTTVVAAIMLFPVSVCLEHRSWANLWQGATDAVSSVLTFTRAARSRAGSEAGNRVAMDTSGIWEAALRHAVVSGICFNLFYDVSFRLLGQLHPLTHAVGNTVKRIVVISAGAAAFGGDFGGPRGAMGSTLAVVGVLAFSVAKTR 1348
F + NR + G++ A+V FAL Y S+G+N+ +K+A LAP L WT A + +G+ W P + ++ L+ + +LH + H+ V+ +GAG +SF +KASE +A LS L +PL P YLTL+PV+ GV ++S +++ FSW + +A+ SN+++A R G + +T +G+ ++ +TY + T++++ ML PV++ LE N + + +G + + +++ + + + + +F L + P++HA+GNT+KR+ +I A FG +G +GS +AV GVL +S+AKT+
Sbjct: 69 FEVSNREKA---GFLGQQKRAKVGITFALWYILSIGYNICSKKALNLAPNLAWTAAFFQMSLGTLYVGPLWLSGLRARPNLTFDEVARLLPVAMLHCLVHVGGVISMGAGAVSFTYIVKASEPAVSAALSA--LATKTFLPL-----PVYLTLIPVMGGVALSSVSELTFSWKSFNYAMMSNVASASR-----------------------------------------------GLVGKQTLNKKLGKN-------MNAMNTYAILTLLSSAMLLPVALFLEGPQILNAFGD----------------------------LQRAGKFSEYIAQTLMAALFYFTYNECAFVCLDNVSPVSHALGNTLKRVFIIVASIIVFGNKMT-TQGIVGSVMAVAGVLLYSLAKTK 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52713.12586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig52713.12586.1 >prot_H-elongata_contig52713.12586.1 ID=prot_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=346bp MALAAWSFKAAPWPRIRLQDIGVLVSIGLLHTVSHLAVVLGLGAGTISFVback to top mRNA from alignment at H-elongata_contig52713:473..3326- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig52713.12586.1 ID=mRNA_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2854bp|location=Sequence derived from alignment at H-elongata_contig52713:473..3326- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig52713:473..3326- >mRNA_H-elongata_contig52713.12586.1 ID=mRNA_H-elongata_contig52713.12586.1|Name=mRNA_H-elongata_contig52713.12586.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2076bp|location=Sequence derived from alignment at H-elongata_contig52713:473..3326- (Himanthalia elongata Himel1 dioecious)back to top |