mRNA_H-elongata_contig116.1258.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A6H5KWX2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX2_9PHAE) HSP 1 Score: 622 bits (1604), Expect = 6.560e-194 Identity = 371/779 (47.63%), Postives = 494/779 (63.41%), Query Frame = 2
Query: 854 ARLLDALSISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCMWYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSS-GSRRLLGPLGPMSQAQAVAVAAKTSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQT--PLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECEDRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLLERHSLGIFVLHYEGAKFLQQPAGFVG-GTWVGCKLDGKVRKRALNGLREYLGSLETLRWHLARQDLWALVELWKAYEASDIWTSGRRHTSCRIYKAKLDLLRERADCHQGQSNQATSPTVEHAYDATWDLARALEMVADFQEFDGCCDAVPLYRESVGAFNKFLDHAVARGATAGNLKSD-RLYLERTIAKLGSLQLKRGNTLEALVQSRKSLMFMR-NEGTE-GSHSSVSDGSYSIPMEQVVLSFAYDTVEALSLETNVEVAEGVYEEVAIILRRLYGNEASLCLEARGKEKLASMMAAMGRLDQA---EVMNNQCLRDVTKAFGAVHPVIARVLDQKSFLLQSQMNLKGARACLQEAKQIRAAFFGKTHPLANPTPVNQG-------------------VVQKDTRHQTTGIISQEAIELLKKRTIRNPSYEAGDEQGTGHFAKMPPPVAHD 3103
+RL++AL IGG TTVIFD ANGKSVLAAA ++D RV +PGGVIWL AG A RLL+MMELAVCQV S +K P+RF +V ASDYL+SLLVR G RS LLVLDDV + VV AFE VGLSLL+TTR+ IA++A+ +S+ G RL+GPLGP+S A+A++ AAK + TR++ K +L+ GR PLAVG +ASTLKQ PL+W +TS K + F GL + R +++ EDR+ AS+A LS++PEE+QM +SAL I+P GLPV+C LL ++W T +R TIL AE FE R LL+R G FVLHYE A+FLQ+ AGF G G WVGCKL G+ R+ A N L ++L S +TLR HLA++DLW L +LW+A E TSG H SCRIY+++LDLLR+ AD G +++ S T A +AT DLA+AL+MVAD+Q + CCDA PLYRES+ + ++ L+ +GA +G L+S + LER KLG+L LK+G ++AL +SL +R +GT G S + G +P + VV S EAL +V+ AEG+YEE AIILRRLYG++ SLCLE RG E+LASMM GR D+A +N++CL TKAFG VHPV+ARV+DQK +L ++ +L GA + EA++IR AF+GK H L P+ Q +V ++ R+ + +E I++ K T PS D+Q ++P PV D
Sbjct: 3 SRLVEALGPGGGMGVIGGATTVIFDSVANGKSVLAAAAMQDPRVQAAFPGGVIWLRAGHSADDRLLRMMELAVCQVNEERSAHGAAK---HVPERFTDVGTASDYLSSLLVRTSPTGGLRS---TLLVLDDVWEAKVVEAFETVGLSLLVTTREPLIARMASPHSAAGVSRLIGPLGPLSDAEAISAAAKAAATRRVPPKEAKQLLDKTGRCPLAVGVVASTLKQAQGPLDWVSTSSKVKKTFAGLHRRRRVTTSTAEQDAEDRVTASIAAGLSNMPEENQMLYSALCILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQKSAGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHHSTTARVASEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVRIQGAGSGPLESRIKRALERITGKLGALLLKQGKHMDALNPCAESLTLIRARQGTNLGPEGSSNLGRSHLPHQDVVDSLC-SMAEALMKGNSVDEAEGMYEEAAIILRRLYGDDESLCLETRGIEQLASMMLEAGRADKAGGKSHLNDRCLSKATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARKIREAFYGKGHALVAPSLQMQAHLEFTAGKKEVASALLKECLVLQEDRYGSNDDRVRETIDMFKTFTSAKPSPPQPDQQRLLTTREVPEPVVPD 774
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: D7G1G8_ECTSI (Kinesin light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G8_ECTSI) HSP 1 Score: 469 bits (1206), Expect = 6.460e-145 Identity = 283/641 (44.15%), Postives = 386/641 (60.22%), Query Frame = 2
Query: 1115 IESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATL-NSSGSRRLLGPLGPMSQAQAVAVAAKTSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQT--PLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECEDRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLLERHSLGIFVLHYEGAKFLQQPAGFVG-GTWVGCKLDGKVRKRALNGLREYLGSLETLRWHLARQDLWALVELWKAYEASDIWTSGRRHTSCRIYKAKLDLLRERADCHQGQSNQATSPTVEHAYDATWDLARALEMVADFQEFDGCCDAVPLYRESVGAFNKFLDHAVARGATAGNLKSD-RLYLERTIAKLGSLQLKRGNTLEALVQSRKSLMFMR-NEGTE-GSHSSVSDGSYSIPMEQVVLSFAYDTVEALSLETNVEVAEGVYEEVAIILRRLYGNEASLCLEARGKEKLASMMAAMGRLDQAEVMNNQCLRDVTKAFGAVHPVIARVLDQKSFLLQSQMNLKGARACLQEAKQIRAAFFGKTHPLANPTPVNQGVVQKDTRHQTTGIISQEAIELLKK 3016
+ R P+RF +V ASDYL+SLLVR G RS LLVLDDV + VV AFE VGLSLL+TTR+ IA++A+ N++G RL+GPLGP+S A+A + AAK + TR+ K +L+ GR PLAVG +ASTLKQ PL+W +TS K + F GL + R + +++ EDR+ AS+A S++PEE QM +SAL I+P GLPV+C LL ++W T +R TIL AE FE R LL+R G FVLHYE A+FLQ P GF G G WVGCKL G+ R+ A N L ++L S +TLR HLA++DLW L +LW+A E TSG H SCRIY+++LDLLR+ AD G +++ S T + A +AT DLA+AL+MVAD+Q + CCDA PLYRES+ + ++ L+ +G +G L+S + LER KLG+L LK+G +AL +SL +R +GT+ G S S G +P + VV SLC +A + +D+AE +N +CL + TKAFG VHPV+ARV+DQK +L ++ +L GA + EA+QIR AF+GK H L P+ +Q + T ++A LLK+
Sbjct: 14 VAKRVPERFTDVGTASDYLSSLLVRTSPTGGLRS---TLLVLDDVWEAKVVEAFETVGLSLLVTTREPLIARMASSHNAAGVSRLIGPLGPLSGAEATSAAAKAAATRRAPPKEAKQLLDKTGRCPLAVGVVASTLKQAQGPLDWVSTSSKVKKTFAGLHRRRRVKASTAEQDAEDRVTASIAAGFSNMPEETQMLYSALCILPPGLPVSCRLLEQVWETGKRTTILAAEAFEHRRLLDRLGPGNFVLHYEAARFLQNPPGFAGEGAWVGCKLRGQGRELAFNRLCKHLDSFDTLRDHLAKRDLWGLTQLWQACETEAKKTSGHSHVSCRIYESRLDLLRQEADIVAGPASRHRSSTAKVACEATLDLAQALDMVADYQAYRRCCDATPLYRESIDSLHQSLELVSIQGTGSGALESRIKRALERITGKLGALLLKQGKHRDALHPCAESLTLIRARQGTDLGPEGSSSLGRSHLPHQDVV--------------------------------------DSLC-------SMAEALMRGNSVDEAEELNERCLSEATKAFGDVHPVVARVIDQKGRILLAEKDLDGAASWFAEARQIREAFYGKGHALVAPS------LQMQAHLEFTAGNKEDASALLKE 600
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A6H5JK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK27_9PHAE) HSP 1 Score: 164 bits (416), Expect = 3.690e-37 Identity = 107/320 (33.44%), Postives = 163/320 (50.94%), Query Frame = 2
Query: 3272 LVGKFGYE-EAVYSLIDSDVRLNVGSGCLKANQVVGPITALTGQLYLIECGEVSVLASVIVDCQPSGSAFDVP---LELDFRVGGP-QGEMGDSDCDPESLDKEQREEYMAILSETYK--ILGRDKEGDPWNVFDEARTSVLYDTGMFFVRARVQHFSQWCLGRTTNLESAFEDQLVTWPRRPGRKEMEFVNATDRPLIILVLPTTWSNEAVHSVAMGFTAEHL-GAHLAISKAVEKSILEEATHPQVVQVPCAKRNGPLQVGQRCPSSTFQLAESTGNQARVAMITKEGHTVAVWNYRIVKHRTRVVILPGQFSDEMVP 4207
LV +F + + Y D+ VRL V CLK +V GPI+ +T + +++E G+ L S ++DCQPSG+ F P L LDF G + G D D D E +E +AIL TYK + R +EG PW + ++ +F+R +++HFS CLG +L S+ D V R ++++EFVNATD+ ++ VLPT +S A S+ G + G + + + E I+ AT P VP K+ G + G CP+ T+ + + +ARV M T + W + RT++V+LP FS P
Sbjct: 781 LVDQFDWTTDETYFDADAGVRLVVRPDCLKEGEVAGPISVVTDKRHIVERGDGLFLLSTMIDCQPSGTIFQDPQNPLVLDFVFGEEDEDSQGTDDTDE---DTEDGKEDLAILRATYKARVFWRMEEGQPWELHEDGAWDFDDQLKKYFLRVKIRHFSDVCLGTELSLHSSC-DSCVVSRGRTKKRQLEFVNATDKKIVFKVLPTGYSTSATKSINAGVEVPGIVGVTVGLDRESETVIMSAATAPSTFSVPFKKKAGTPKAGDVCPAHTYNIPKKMRGEARVYMYTSDRQEP--WLNEVHPERTQLVVLPPMFSGGPTP 1094
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A1S3N1A5_SALSA (apoptotic protease-activating factor 1-like isoform X1 n=1 Tax=Salmo salar TaxID=8030 RepID=A0A1S3N1A5_SALSA) HSP 1 Score: 90.1 bits (222), Expect = 2.560e-14 Identity = 118/489 (24.13%), Postives = 207/489 (42.33%), Query Frame = 2
Query: 431 SLEKISKTHTLADHGNAQHGAKTGGPGREIILESWQSTARKPRRRVYATLVRLLLESENAKRALMLKQRFSPLHPKCVHEQHKLEGGGFHQANLMVSEGLPPPFLDVVNDAPARLEAFALSKISDAVPMTPLCYVDREMERARLLDALSISSESVFIGGTTTVIFDPAANGKSVLAAAVVED-SRVCMWYPGGVIWLWAGP-GATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECEDRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLLER---HSLGIFVLHYEGAKFLQQ 1879
SLE+ + L DH G TG E + ++ R+ A L+ LLL +N Q + + V E + H + ++S F +D R LS+ VP P+ +V R R+ + L E ++ +F A +GKSVLAA V D + + +PGGV WL G + L+++ L + +D S + R+P ++E A + L L++R RS LL+LDD+ D +V++AF+ + +L+TTR ++A SGS+ + + + QA+ + A +G Q + +V+ +PL V + + L++ P WA Y + LQ+ + ++ D + ++A S+ L +EH+ + L ++ + V +L +W + + F + LL R H ++ LH FL +
Sbjct: 18 SLEQDIRASYLMDH-MISDGVLTGD-------EEDRIRSKPTRKEQAAALLELLLRKDN--------QAYISFYNALVRESYGDLASLLHNSLPLISPEAEKSF----SDGGTRYVQAVLSE--GGVPQRPVVFVSRPALVNRVREKLYRLQEPGWV-----TVFGMAGSGKSVLAAEAVRDHALITECFPGGVHWLSIGQLDRSDLLVRIQSLCFRLEQQSQEKDPSSSLH-RSP---GSLEEAKERLRFLMLRRYPRS--------LLILDDIWDSSVIKAFD-IQCRVLLTTRDRSLADCV----SGSKSEVAVESGLEEDQALEILALYVNGKPQRLPEQARSIVRECKGSPLVVSLIGALLREFPDRWA------YYLHT-LQQKKFKRIRKSSSYDYDALDQAMAASIQVLSDEHRELYIDLTVLEKDVKVPAKVLSVLWDLEPEEVEDVLQDFVNKSLLFRDCHHRPYLYYLHDLQLDFLAE 455
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A7N6BY57_ANATE (Apoptotic peptidase activating factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6BY57_ANATE) HSP 1 Score: 85.9 bits (211), Expect = 2.060e-13 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 2
Query: 809 VPMTPLCYVDREMERARLLDAL-SISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCM-WYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
VP P+ +V R R+ + L + + +I +F A +GKSVLAA V D R+ +PGG+ WL G LL ++ ++ N+ ++S R P N+++ A + L L++R R+ LL+LDD+ D V++AF+ + LL+TTR ++ T + SG++ + + +++ + + A T Q + +V+ +PL V + + LK+ P W + +L + + + I + D + ++A S+ LP+EHQ + L ++ + + +L +W + I E F + LL
Sbjct: 121 VPQRPVVFVSRPELLNRVREKLYRLQKDPGWI-----TVFGMAGSGKSVLAAEAVRDHRLIEDCFPGGIHWLSIGQVEKPDLLVKIQSLCFRLEQNLDSQSLS----RPP---NSLDEAKERLRFLMLRKYPRT--------LLILDDIWDSTVLKAFD-IQCRLLLTTRNRSL----TDSVSGAKYEVEVESGLDESKGLEILALYTKAKVQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRW--------RYYLCQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPDEHQDLYKDLTVIEKDVKIPAKVLSVLWDLEQEEVEDILEEFVNKSLL 428
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A7N6BQ52_ANATE (Apoptotic peptidase activating factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6BQ52_ANATE) HSP 1 Score: 85.9 bits (211), Expect = 6.200e-13 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 2
Query: 809 VPMTPLCYVDREMERARLLDAL-SISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCM-WYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
VP P+ +V R R+ + L + + +I +F A +GKSVLAA V D R+ +PGG+ WL G LL ++ ++ N+ ++S R P N+++ A + L L++R R+ LL+LDD+ D V++AF+ + LL+TTR ++ T + SG++ + + +++ + + A T Q + +V+ +PL V + + LK+ P W + +L + + + I + D + ++A S+ LP+EHQ + L ++ + + +L +W + I E F + LL
Sbjct: 118 VPQRPVVFVSRPELLNRVREKLYRLQKDPGWI-----TVFGMAGSGKSVLAAEAVRDHRLIEDCFPGGIHWLSIGQVEKPDLLVKIQSLCFRLEQNLDSQSLS----RPP---NSLDEAKERLRFLMLRKYPRT--------LLILDDIWDSTVLKAFD-IQCRLLLTTRNRSL----TDSVSGAKYEVEVESGLDESKGLEILALYTKAKVQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRW--------RYYLCQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPDEHQDLYKDLTVIEKDVKIPAKVLSVLWDLEQEEVEDILEEFVNKSLL 425
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A7N6BWL2_ANATE (Apoptotic peptidase activating factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6BWL2_ANATE) HSP 1 Score: 85.9 bits (211), Expect = 6.290e-13 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 2
Query: 809 VPMTPLCYVDREMERARLLDAL-SISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCM-WYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
VP P+ +V R R+ + L + + +I +F A +GKSVLAA V D R+ +PGG+ WL G LL ++ ++ N+ ++S R P N+++ A + L L++R R+ LL+LDD+ D V++AF+ + LL+TTR ++ T + SG++ + + +++ + + A T Q + +V+ +PL V + + LK+ P W + +L + + + I + D + ++A S+ LP+EHQ + L ++ + + +L +W + I E F + LL
Sbjct: 118 VPQRPVVFVSRPELLNRVREKLYRLQKDPGWI-----TVFGMAGSGKSVLAAEAVRDHRLIEDCFPGGIHWLSIGQVEKPDLLVKIQSLCFRLEQNLDSQSLS----RPP---NSLDEAKERLRFLMLRKYPRT--------LLILDDIWDSTVLKAFD-IQCRLLLTTRNRSL----TDSVSGAKYEVEVESGLDESKGLEILALYTKAKVQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRW--------RYYLCQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPDEHQDLYKDLTVIEKDVKIPAKVLSVLWDLEQEEVEDILEEFVNKSLL 425
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A7N6FG91_ANATE (Apoptotic protease-activating factor 1 n=1 Tax=Anabas testudineus TaxID=64144 RepID=A0A7N6FG91_ANATE) HSP 1 Score: 85.9 bits (211), Expect = 6.390e-13 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 2
Query: 809 VPMTPLCYVDREMERARLLDAL-SISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCM-WYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
VP P+ +V R R+ + L + + +I +F A +GKSVLAA V D R+ +PGG+ WL G LL ++ ++ N+ ++S R P N+++ A + L L++R R+ LL+LDD+ D V++AF+ + LL+TTR ++ T + SG++ + + +++ + + A T Q + +V+ +PL V + + LK+ P W + +L + + + I + D + ++A S+ LP+EHQ + L ++ + + +L +W + I E F + LL
Sbjct: 121 VPQRPVVFVSRPELLNRVREKLYRLQKDPGWI-----TVFGMAGSGKSVLAAEAVRDHRLIEDCFPGGIHWLSIGQVEKPDLLVKIQSLCFRLEQNLDSQSLS----RPP---NSLDEAKERLRFLMLRKYPRT--------LLILDDIWDSTVLKAFD-IQCRLLLTTRNRSL----TDSVSGAKYEVEVESGLDESKGLEILALYTKAKVQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRW--------RYYLCQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPDEHQDLYKDLTVIEKDVKIPAKVLSVLWDLEQEEVEDILEEFVNKSLL 428
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A3Q1IYW2_ANATE (Apoptotic protease-activating factor 1 n=4 Tax=Anabas testudineus TaxID=64144 RepID=A0A3Q1IYW2_ANATE) HSP 1 Score: 85.9 bits (211), Expect = 6.470e-13 Identity = 84/341 (24.63%), Postives = 156/341 (45.75%), Query Frame = 2
Query: 809 VPMTPLCYVDREMERARLLDAL-SISSESVFIGGTTTVIFDPAANGKSVLAAAVVEDSRVCM-WYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAK-TSGTRQIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
VP P+ +V R R+ + L + + +I +F A +GKSVLAA V D R+ +PGG+ WL G LL ++ ++ N+ ++S R P N+++ A + L L++R R+ LL+LDD+ D V++AF+ + LL+TTR ++ T + SG++ + + +++ + + A T Q + +V+ +PL V + + LK+ P W + +L + + + I + D + ++A S+ LP+EHQ + L ++ + + +L +W + I E F + LL
Sbjct: 121 VPQRPVVFVSRPELLNRVREKLYRLQKDPGWI-----TVFGMAGSGKSVLAAEAVRDHRLIEDCFPGGIHWLSIGQVEKPDLLVKIQSLCFRLEQNLDSQSLS----RPP---NSLDEAKERLRFLMLRKYPRT--------LLILDDIWDSTVLKAFD-IQCRLLLTTRNRSL----TDSVSGAKYEVEVESGLDESKGLEILALYTKAKVQGLPEEARSIVRECKGSPLVVSLIGALLKEKPNRW--------RYYLCQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPDEHQDLYKDLTVIEKDVKIPAKVLSVLWDLEQEEVEDILEEFVNKSLL 428
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Match: A0A8C5H0E3_9TELE (Apoptotic peptidase activating factor 1 n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5H0E3_9TELE) HSP 1 Score: 79.3 bits (194), Expect = 6.210e-11 Identity = 88/358 (24.58%), Postives = 161/358 (44.97%), Query Frame = 2
Query: 755 NDAPARLEAFALSKISDAVPMTPLCYVDREMERARLLDALSISSESVFIGGTTTVIFDPAANGKSVLAA-AVVEDSRVCMWYPGGVIWLWAGPGATGRLLQMMELAVCQVTANVSRDAMSKIESRAPKRFNNVEAASDYLASLLVRICARSGARSGWNMLLVLDDVCDVNVVRAFEAVGLSLLITTRKSTIAQVATLNSSGSRRLLGPLGPMSQAQAVAVAAKTSGTR-QIRHKHVNELVKSAGRNPLAVGALASTLKQTPLNWAATSVKTYQIFLGLQKWRGEQNIGPDEECE-DRIIASLAVSLSSLPEEHQMCFSALYIVPCGLPVTCNLLGKIWGTCERRTILIAEGFEVRGLL 1819
+D P LS+ VP P+ +V R R+ + L ++ G TV F A +GKSVLAA AV + +PGG+ WL G LL ++ ++ ++ ++ R P N+++ A + L L++R RS LL+LDD+ D V++AF+ + +L+TTR ++ T + SG++ +G + + +++ + + TR + + +V+ +PL V + + LK+ P W+ +L + + + I + D + ++A S+ LPEEHQ + L ++ + + +L +W E I F + LL
Sbjct: 105 SDGPTSYVQAMLSE--GGVPQRPVVFVSRPELVNRVREKLYRLQKNP---GWVTV-FGMAGSGKSVLAAEAVRHHGLIEDCFPGGIHWLSIGQLDKPDLLVKIQTLCFRLEQSLDSQSLH----RPP---NSLDEAKERLRFLMLRRYPRS--------LLILDDIWDSTVLKAFD-IHCRILLTTRNRSV----TDSVSGAKYEVGVESGLDEDKSLEILGLYTRTRPRTLPEEARSIVRECKGSPLVVSLIGALLKEKPDRWS--------YYLRQLQQKQFKRIRKSSSYDYDALDQAMAASIEVLPEEHQELYRDLTVLEKDIKIPAQVLCVLWDLEEEEVEDILHEFVNKSLL 428 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig116.1258.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig116.1258.1 >prot_H-elongata_contig116.1258.1 ID=prot_H-elongata_contig116.1258.1|Name=mRNA_H-elongata_contig116.1258.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1454bp MDTSRVIYEERMAWSDGQKFVLGKPKQLRKFIHKPNNLGKRMRVKLSALEback to top mRNA from alignment at H-elongata_contig116:107..26897- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig116.1258.1 ID=mRNA_H-elongata_contig116.1258.1|Name=mRNA_H-elongata_contig116.1258.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=26791bp|location=Sequence derived from alignment at H-elongata_contig116:107..26897- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig116:107..26897- >mRNA_H-elongata_contig116.1258.1 ID=mRNA_H-elongata_contig116.1258.1|Name=mRNA_H-elongata_contig116.1258.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=8724bp|location=Sequence derived from alignment at H-elongata_contig116:107..26897- (Himanthalia elongata Himel1 dioecious)back to top |