prot_H-elongata_contig5265.12578.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig5265.12578.1
Unique Nameprot_H-elongata_contig5265.12578.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length188
Homology
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: D8LEV0_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEV0_ECTSI)

HSP 1 Score: 224 bits (571), Expect = 6.240e-72
Identity = 122/186 (65.59%), Postives = 142/186 (76.34%), Query Frame = 0
Query:    1 MRATAVYLL-FLTSTTAFVPLAPTCRYVGSRRASSAAVAYRSSSSSSKALYMSFDFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCNKPQNTWKMMYDEVIKTVKGDVDE 185
            MR T + LL  L S   FVP    CR   S   + A    R+S+SS   L M FDFK  +EKMSD RYARVRHILVEEKGEEGR++LE AK +I GD+DKFSEVAE +STCTSAP+GGRLKLLARGETVP FD++AF GELGVVHGPVET FGTHLI+VESCNKPQNTWKM++D+++  V G  +E
Sbjct:    2 MRETILLLLCVLVSVAGFVPAPSICRNARSAVGTPA----RTSTSS---LSMGFDFKGTLEKMSDPRYARVRHILVEEKGEEGRSKLEEAKEEIAGDLDKFSEVAEKMSTCTSAPRGGRLKLLARGETVPEFDDIAFNGELGVVHGPVETQFGTHLIYVESCNKPQNTWKMLFDDIVDKVSGKEEE 180          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S2HC75_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HC75_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.690e-17
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   68 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVE 159
            A   HIL++    E   +++A K +IG DV KF+E A   S C S  +GG L    R   VP FD+V F  E+GVVHGP+ T+FG HLI++E
Sbjct:   18 AEASHILIKGTDAEAEQKIKAIKEEIGNDVTKFAEAATQHSDCPSGRQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIRTSFGFHLIFIE 109          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7R9W6N6_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W6N6_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.480e-16
Identity = 45/109 (41.28%), Postives = 62/109 (56.88%), Query Frame = 0
Query:   54 DFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCN 162
            D KD +  +  T  A   HIL++      + +++  K +IG D DKF+E+A   S C S  +GG L    R   VP FD+V F  E+GVVHGP+ET+FG HLI +   N
Sbjct:   62 DAKDFLSGL--TMRAEASHILIKGTDSGAKRKIDDIKKEIGNDSDKFAELAALTSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIETSFGYHLILIHRRN 168          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: R1EID3_EMIHU (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EID3_EMIHU)

HSP 1 Score: 82.4 bits (202), Expect = 2.590e-16
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 0
Query:   59 IEKMSDTRYARVRHILVEEKG----EEGRARLEAAKIDIGGDVDKFSEVAESISTCT-SAPKGGRLKLLARGETVPA-FDEVAF-KGELGVVHGPVETTFGTHLIWVESCNKPQNTWKMMYD 173
            I++M D R A+V HIL++  G    EE RA+ EA K++IGGD DKF+EVA  +S C  ++ KGG L    R + +P   D+V F K  +  V+GP+ T  G HL+++ SC +P    + ++D
Sbjct:   50 IQQMIDQRVAKVSHILMKPGGSMTIEEARAQFEAWKVEIGGDSDKFAEVARRVSECEQTSEKGGDLGYCTRLKQLPRQIDDVVFVKEPVPGVYGPIGTKQGLHLVYLHSCGEPMGRTEALFD 171          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S1Y1S1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1S1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 1.990e-15
Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   65 TRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 158
            T+ A   HIL++  G E   +LE  K++I     KF+E A   S+C SA KGG L     G+ V  FD+V F  ++GVVHGP++T FG HLI+V
Sbjct:   44 TQKASASHILIK-GGPEAANKLEELKVEIDNSPVKFAEAASRFSSCPSARKGGELGEFGPGQMVKEFDQVVFNDDVGVVHGPIKTQFGYHLIYV 136          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S3V5S0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5S0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.280e-15
Identity = 42/95 (44.21%), Postives = 56/95 (58.95%), Query Frame = 0
Query:   68 ARVRHILVE----EKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 158
            A+  HIL+     E  EE R +L   K +IG D +KF++ A  IS C SA KGG L     G+ V  FD+V F  ++G+VHGP+ T FG HLI +
Sbjct:   58 AKCSHILIGPRDWESEEEAREQLARLKTEIGNDPEKFAQAASRISGCPSAKKGGDLGEFGPGQMVKNFDKVVFNEDVGIVHGPISTQFGEHLILI 152          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A6U6D7J0_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D7J0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.890e-15
Identity = 41/95 (43.16%), Postives = 54/95 (56.84%), Query Frame = 0
Query:   68 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWVESCN 162
            A   HILV+  G E   ++   K +IG D +KF++ A   S C S  +GG L    R   VP FD+V F   +GVVHGP+ET FG HLI ++  N
Sbjct:   70 AEASHILVKGTGPESLRKINDIKKEIGDDPEKFADAAAQNSDCPSGQQGGSLGEFGRYSMVPEFDKVVFNENVGVVHGPIETGFGYHLILIQRRN 164          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S3PZX5_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZX5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.110e-14
Identity = 48/103 (46.60%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   72 HILVEEKGEEGRARLEAAKIDI----------GGDVDK------FSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 158
            HIL+  KG     + E  K+DI          GG VD       FS+ A   STC S  KGG L   ARGE VP FD VAF  ++GV+HGPV+T FG+HLI V
Sbjct:   52 HILL--KGSNANQQCEKLKMDIYKTAMNKGASGGGVDPEALMSAFSQAASRRSTCPSKNKGGSLGTFARGEMVPEFDAVAFGDDVGVIHGPVDTQFGSHLILV 152          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A7S1BG89_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BG89_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 1.130e-14
Identity = 44/95 (46.32%), Postives = 55/95 (57.89%), Query Frame = 0
Query:   68 ARVRHILVEEKG----EEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 158
            AR  HILV  K     EE + RL   K ++G D  KF+E A S S+C S  KGG L     G+ V  FD+V F  ++GVVHGP+ T FG HLI +
Sbjct:   57 ARASHILVGPKNWDSQEEAKDRLLRLKEEVGNDPTKFAEAAASNSSCPSKAKGGDLGEFGPGQMVKNFDKVVFNEDVGVVHGPISTQFGEHLILI 151          
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Match: A0A194AEB5_9DELT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfoplanes formicivorans TaxID=1592317 RepID=A0A194AEB5_9DELT)

HSP 1 Score: 75.1 bits (183), Expect = 1.770e-14
Identity = 46/91 (50.55%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   68 ARVRHILVEEKGEEGRARLEAAKIDIGGDVDKFSEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETTFGTHLIWV 158
            AR RHILV       R   E  K DI    D F+EVA + STC S  +GG L    + E VP F+EV F G++GVVHGPV+T FG HLI V
Sbjct:    4 ARARHILVPT-----RETCEQLKQDIMNGQD-FAEVAAAHSTCPSGRRGGDLGTFGKEEMVPEFEEVVFTGDVGVVHGPVQTQFGFHLIEV 88          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig5265.12578.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEV0_ECTSI6.240e-7265.59Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A7S2HC75_9STRA1.690e-1745.65Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helico... [more]
A0A7R9W6N6_9STRA2.480e-1641.28Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudi... [more]
R1EID3_EMIHU2.590e-1640.98Peptidyl-prolyl cis-trans isomerase n=2 Tax=Emilia... [more]
A0A7S1Y1S1_9STRA1.990e-1544.68Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gramma... [more]
A0A7S3V5S0_9STRA4.280e-1544.21Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaeto... [more]
A0A6U6D7J0_9STRA6.890e-1543.16Peptidyl-prolyl cis-trans isomerase n=1 Tax=Odonte... [more]
A0A7S3PZX5_9STRA1.110e-1446.60Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chaeto... [more]
A0A7S1BG89_9STRA1.130e-1446.32Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coreth... [more]
A0A194AEB5_9DELT1.770e-1450.55Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 65..161
e-value: 4.6E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR43629FAMILY NOT NAMEDcoord: 33..170
NoneNo IPR availablePANTHERPTHR43629:SF2RHODANESE-LIKE/PPIC DOMAIN-CONTAINING PROTEIN 12, CHLOROPLASTICcoord: 33..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..187
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.752
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 69..161
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePFAMPF00639Rotamasecoord: 73..159
e-value: 2.7E-13
score: 50.7
IPR000297Peptidyl-prolyl cis-trans isomerase, PpiC-typePROSITEPS50198PPIC_PPIASE_2coord: 65..160
score: 20.356

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig5265contigH-elongata_contig5265:1426..5947 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig5265.12578.1mRNA_H-elongata_contig5265.12578.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig5265 840..5980 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig5265.12578.1 ID=prot_H-elongata_contig5265.12578.1|Name=mRNA_H-elongata_contig5265.12578.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=188bp
MRATAVYLLFLTSTTAFVPLAPTCRYVGSRRASSAAVAYRSSSSSSKALY
MSFDFKDMIEKMSDTRYARVRHILVEEKGEEGRARLEAAKIDIGGDVDKF
SEVAESISTCTSAPKGGRLKLLARGETVPAFDEVAFKGELGVVHGPVETT
FGTHLIWVESCNKPQNTWKMMYDEVIKTVKGDVDENQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000297PPIase_PpiC