prot_H-elongata_contig115983.1257.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig115983.1257.1
Unique Name	prot_H-elongata_contig115983.1257.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	147

Homology

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: D7G1Q4_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Q4_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.210e-69
Identity = 103/147 (70.07%), Postives = 120/147 (81.63%), Query Frame = 0

Query:    1 IIYAAVITSFIYPVVAHWVWSDTGWASAKLDEEDLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSEQPDSAAKSMLNTTICPSSATLVTMIVQWLYHSKF 147
            +IY  +ITS IYPVVAHWVW+ +GWAS+   + DLL+GCG ADFSGSGVVHLTGGLMA +AA    PRGGRFD EG+P ++ RQSPALNVLGTL LW GWFFFNASGV SFS QPD AAKSMLNT +CPS+A +VTM++ W+YH  F
Sbjct:  106 LIYGVIITSLIYPVVAHWVWARSGWASSFRADGDLLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDAEGKPRRLERQSPALNVLGTLILWAGWFFFNASGVASFSRQPDDAAKSMLNTAVCPSAAVVVTMLIHWMYHRSF 252

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: D7G265_ECTSI (Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G265_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.550e-37
Identity = 70/140 (50.00%), Postives = 93/140 (66.43%), Query Frame = 0

Query:    1 IIYAAVITSFIYPVVAHWVWSDTGWASAKL-DEEDLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSEQPDSAAKSMLNTTICPSSATLVTMIV 139
            ++++ ++TSFIYP+VAHW WSD GWASA+L D++DLL GCG  DF+GSGVVH+TGG+ A +   +  PR GRF+ +G    M +QS  L  LGT  LW GW  FNA  V SF   P  AAK M  T I  +S  + +++V
Sbjct:  138 VLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVVHMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSSFVATPAVAAKVMGVTVIGGASGGITSLLV 277

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.570e-35
Identity = 73/149 (48.99%), Postives = 95/149 (63.76%), Query Frame = 0

Query:    3 YAAVITSFIYPVVAHWVWSDTGWASAKLDEED---LLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSE-QPDSAAKSMLNTTICPSSATLVTMIVQWLYHSKF 147
            YA  +TSFIYPVV HW W   GWAS     ++   LL GCGAADF+GSGVVH+ GG+ A +AAI  +PR  RF   G  C++ +QSPAL  LGTL LW GW+ FNA    + S  +   AA+++++TTI PS+  LV +I   +   KF
Sbjct:  158 YAIALTSFIYPVVVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGIAALVAAIAVKPRKSRF-RHGHACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVIAVKMLEKKF 305

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A6H5J7X8_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7X8_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.090e-35
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 0

Query:    1 IIYAAVITSFIYPVVAHWVWSDTGWASAKL-DEEDLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSEQPDSAAKSMLNTTICPSSATLVTMI 138
            ++++ +ITSFIYP+VAHW WSD GWASA+L D++DLL GCGA + +GSGVVH+TGG+ A     +  PR GRF+ +G    M +QS  L  LGT  LW GW  FN   + SF   P  AA+ M  T I  +S  + +++
Sbjct:  138 VLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGAIELAGSGVVHMTGGMAALTGIFILGPRAGRFNEDGSSNTMPQQSAVLQTLGTFILWWGWLGFNGGSLPSFVSMPAVAARVMAVTVISGASGGISSLV 276

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A6H5L6H3_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6H3_9PHAE)

HSP 1 Score: 122 bits (307), Expect = 5.680e-30
Identity = 72/155 (46.45%), Postives = 91/155 (58.71%), Query Frame = 0

Query:    4 AAVITSFIYPVVAHWVWSDTGWASAKLDEED---------------LLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSE-QPDSAAKSMLNTTICPSSATLVTMIVQWL 142
            + +IT  IYPVV HWVWS+ GWAS +  E+                LLLGCGA DF+G+GVVH+TGG+ A +AA +  PR  RF   G P +M +QSPAL  LG L LW GW+ FN   V S S  +    A +M+NTTI  S+A  V  +  WL
Sbjct:  150 SVLITFLIYPVVVHWVWSEGGWASPRRCEDTTTAVDYQLCREESRGLLLGCGATDFAGAGVVHMTGGMCALVAAKIVGPRTKRF-RNGIPNRMPQQSPALQTLGVLILWVGWYGFNGGSVGSVSNGRSHLVAAAMVNTTI--SAAASVLSVGLWL 301

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A485L4E9_9STRA (Ammonium transporter n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L4E9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.330e-29
Identity = 62/133 (46.62%), Postives = 87/133 (65.41%), Query Frame = 0

Query:    3 YAAVITSFIYPVVAHWVWSDTGWASAKLDEEDLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFS-EQPDSAAKSMLNTTICPSSATL 134
            YA ++T+FIYPVV HW+WS TG+ASA  +   LL G GA DF+GSGV+H+TGG+ A +   +  PR GRF+  G+PC M +QS  L  +GTL LW GW+ FN     + +    D AAK  +N T+  ++A++
Sbjct:  167 YAVLLTAFIYPVVVHWLWSPTGFASAT-NVTKLLFGVGAVDFAGSGVIHMTGGMAALVGCYILGPRIGRFE-GGKPCDMPKQSVFLQTIGTLLLWFGWYGFNCMSTGTLTGTSADVAAKVAVNLTLAAAAASI 297

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 2.570e-29
Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 0

Query:   15 VAHWVWSDTGWASAKLDEED---LLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSE-QPDSAAKSMLNTTICPSSATLVTMIVQWLYHSKF 147
            V HW W   GWAS     ++   LL GCGAADF+GSGVVH+ GG+ A +AAI  +PR  RF   GR C++ +QSPAL  LGTL LW GW+ FNA    + S  +   AA+++++TTI PS+  LV +I   +   KF
Sbjct:  119 VVHWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGVAALVAAIAVKPRKSRF-RHGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISGGRSVVAARAVVSTTIGPSAGVLVMVISVKMLEKKF 254

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A7S2Y3F2_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3F2_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.600e-29
Identity = 60/138 (43.48%), Postives = 85/138 (61.59%), Query Frame = 0

Query:    3 YAAVITSFIYPVVAHWVWSDTGWASAKLDEEDLLL-GCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASGVQSFSEQPDSAAKSMLNTTICPSSATLVTMIV 139
            YA  ITSFI+P+ AHWVWS +G+ S  L++ D L+ GCG  DF+GS  VH  GG  AF+  +M  PR GR+   G  C + + S     +GTL LW GWF FN    Q  +E+P +AA++M N+ I   +A + T+++
Sbjct:  160 YAFSITSFIFPLAAHWVWSSSGFLSPFLEDTDKLVSGCGVIDFAGSLTVHCLGGTAAFVTCVMVGPRIGRY-VNGEVCNLPQNSWEFQTVGTLLLWVGWFGFNGVSAQHLTEEPLAAARAMCNSAIAAGTACITTVVL 296

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: A0A4S8K016_MUSBA (Ammonium transporter n=4 Tax=Musaceae TaxID=4637 RepID=A0A4S8K016_MUSBA)

HSP 1 Score: 119 bits (298), Expect = 6.350e-29
Identity = 62/146 (42.47%), Postives = 84/146 (57.53%), Query Frame = 0

Query:    1 IIYAAVITSFIYPVVAHWVWSDTGWASAKLDEEDLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFNASG----VQSFSEQPDSA-----AKSMLNTTICPSSATLVTM 137
            ++Y++++T F+YPVVAHWVWS  GW S       LL G GA DF+GSGVVHL GG+     A++  PR GRFD  G+P  M   +  L VLGT  LW GWF FN       +  + + PD        ++ + T +  S+A LVT+
Sbjct:  127 LVYSSLLTGFVYPVVAHWVWSSEGWLSPSAGGVGLLFGSGAIDFAGSGVVHLVGGIAGLWGAVIEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSYARILVPYPDAPDQGNWTGVGRTAVTTALAGSTAGLVTL 272

[Close]

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Match: E1Z3A4_CHLVA (Ammonium transporter n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3A4_CHLVA)

HSP 1 Score: 119 bits (299), Expect = 7.550e-29
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    1 IIYAAVITSFIYPVVAHWVWSDTGWASAKLDEE------DLLLGCGAADFSGSGVVHLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGWFFFN 104
            I+Y+ +I  F+YPVV HWVWS +GWASA   E+       LL GCGA DF+GSG VH+ GG+ AF  A +  PR GRFD  G+P  +   + AL VLGT  LW GW+ FN
Sbjct:  140 ILYSVLIIGFVYPVVTHWVWSPSGWASAFRSEQADGTFRSLLFGCGAYDFAGSGAVHMVGGVAAFAGAALLGPRMGRFDANGKPVPIPGHNVALAVLGTFILWFGWYGFN 249

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot

BLAST of mRNA_H-elongata_contig115983.1257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G1Q4_ECTSI	2.210e-69	70.07	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
D7G265_ECTSI	1.550e-37	50.00	Ammonium transporter n=2 Tax=Ectocarpus TaxID=2879...	[more]
A0A6H5JVJ2_9PHAE	2.570e-35	48.99	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A6H5J7X8_9PHAE	3.090e-35	47.48	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A6H5L6H3_9PHAE	5.680e-30	46.45	Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1...	[more]
A0A485L4E9_9STRA	1.330e-29	46.62	Ammonium transporter n=2 Tax=Aphanomyces stellatus...	[more]
D8LEG5_ECTSI	2.570e-29	47.45	Ammonium transporter n=1 Tax=Ectocarpus siliculosu...	[more]
A0A7S2Y3F2_9STRA	3.600e-29	43.48	Hypothetical protein n=2 Tax=Fibrocapsa japonica T...	[more]
A0A4S8K016_MUSBA	6.350e-29	42.47	Ammonium transporter n=4 Tax=Musaceae TaxID=4637 R...	[more]
E1Z3A4_CHLVA	7.550e-29	51.82	Ammonium transporter n=1 Tax=Chlorella variabilis ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 1..146 e-value: 6.2E-32 score: 110.8
IPR029020	Ammonium/urea transporter	GENE3D	1.10.3430.10		coord: 1..147 e-value: 1.5E-40 score: 141.2
None	No IPR available	PANTHER	PTHR11730	AMMONIUM TRANSPORTER	coord: 1..144
None	No IPR available	PANTHER	PTHR11730:SF6	AMMONIUM TRANSPORTER	coord: 1..144
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 66..85
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 144..147
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..103
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..65
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..43
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 123..143
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 104..122
None	No IPR available	SUPERFAMILY	111352	Ammonium transporter	coord: 2..147
None	No IPR available	TMHMM	TMhelix		coord: 41..63
None	No IPR available	TMHMM	TMhelix		coord: 121..143
None	No IPR available	TMHMM	TMhelix		coord: 2..21
None	No IPR available	TMHMM	TMhelix		coord: 87..106

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig115983	contig	H-elongata_contig115983:152..1943 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig115983.1257.1	mRNA_H-elongata_contig115983.1257.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig115983 152..1943 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig115983.1257.1 ID=prot_H-elongata_contig115983.1257.1|Name=mRNA_H-elongata_contig115983.1257.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=147bp
IIYAAVITSFIYPVVAHWVWSDTGWASAKLDEEDLLLGCGAADFSGSGVV
HLTGGLMAFIAAIMTRPRGGRFDTEGRPCKMVRQSPALNVLGTLALWTGW
FFFNASGVQSFSEQPDSAAKSMLNTTICPSSATLVTMIVQWLYHSKF

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024041	NH4_transpt_AmtB-like_dom
IPR029020	Ammonium/urea_transptr