prot_H-elongata_contig52630.12571.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52630.12571.1
Unique Nameprot_H-elongata_contig52630.12571.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length37
Homology
BLAST of mRNA_H-elongata_contig52630.12571.1 vs. uniprot
Match: A0A6H5JHN3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHN3_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.430e-10
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    6 QKWVWADEWHVDFSREVGKQIDPAGWEYAVDF 37
            ++W W D+WHVDFSREVG +ID AGWEYAV+F
Sbjct: 1530 KQWEWRDDWHVDFSREVGTEIDAAGWEYAVEF 1561          
BLAST of mRNA_H-elongata_contig52630.12571.1 vs. uniprot
Match: A0A6H5L0S6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S6_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 5.120e-8
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 0
Query:    8 WVWADEWHVDFSREVGKQIDPAGWEYAVD 36
            WVW D+WHVDFS+ VG +ID AGWEY V+
Sbjct: 1280 WVWRDDWHVDFSKAVGTEIDEAGWEYRVE 1308          
BLAST of mRNA_H-elongata_contig52630.12571.1 vs. uniprot
Match: D8LPW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW3_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.790e-7
Identity = 19/29 (65.52%), Postives = 23/29 (79.31%), Query Frame = 0
Query:    8 WVWADEWHVDFSREVGKQIDPAGWEYAVD 36
            W W D+WHVDFS+ VG +ID AGWEY V+
Sbjct: 1894 WAWRDDWHVDFSKAVGTEIDEAGWEYRVE 1922          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52630.12571.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHN3_9PHAE3.430e-1071.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L0S6_9PHAE5.120e-868.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPW3_ECTSI1.790e-765.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52630contigH-elongata_contig52630:2973..3083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52630.12571.1mRNA_H-elongata_contig52630.12571.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52630 2973..3086 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52630.12571.1 ID=prot_H-elongata_contig52630.12571.1|Name=mRNA_H-elongata_contig52630.12571.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=37bp
MLLFRQKWVWADEWHVDFSREVGKQIDPAGWEYAVDF
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