prot_H-elongata_contig52612.12567.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig52612.12567.1
Unique Nameprot_H-elongata_contig52612.12567.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length80
Homology
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: D7G4G7_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G7_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 9.480e-31
Identity = 53/80 (66.25%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 FGLDPDKSFVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWMAL 80
            F +DP+ +F++MATE RRV +F+CQACHRIFPT+LWGS+RNMV L++ +ERF+ LR HE+MSV EVT GMRTSD  WMA+
Sbjct:  619 FSVDPNTTFIEMATEHRRVVDFLCQACHRIFPTELWGSRRNMVCLSRGIERFVVLRWHETMSVLEVTAGMRTSDLEWMAV 698          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: D7G237_ECTSI (Telomerase reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G237_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 2.530e-23
Identity = 42/65 (64.62%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 FGLDPDKSFVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQE 65
            F +DP+ +F++MATE RRV +F+CQACHRIFPT+LWGS+RNMV L++ +ERF+ LRRH++MSV E
Sbjct:  617 FSVDPNMTFIEMATEHRRVVDFLCQACHRIFPTELWGSRRNMVCLSRGIERFVVLRRHDTMSVLE 681          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: L8GIB5_ACACA (Telomerase reverse transcriptase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIB5_ACACA)

HSP 1 Score: 61.2 bits (147), Expect = 4.110e-9
Identity = 27/70 (38.57%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    9 FVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWM 78
            F +     R+VA+F+      + P  LWGSK N+ +LAK+V+ F+ LRRH+  SV    +G+R  D  W+
Sbjct:   62 FANYCCTYRQVASFVKAVLTYLLPATLWGSKHNVAILAKSVDEFVRLRRHDRYSVHSAMSGLRLRDMTWL 131          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A1L7SGC1_FUSMA (Telomerase reverse transcriptase n=2 Tax=Fusarium fujikuroi species complex TaxID=171627 RepID=A0A1L7SGC1_FUSMA)

HSP 1 Score: 60.1 bits (144), Expect = 1.060e-8
Identity = 29/76 (38.16%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    7 KSFVDMATERRRVANFMCQACHRIFPTDLWGS----KRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWM 78
            KS V++AT   +V++F      +I P D WG     KRN   + ++V+RFI LRR E+MS+ E+T  M+ ++  W+
Sbjct:  465 KSLVELATPPSQVSSFCQAVLSKIIPRDFWGDDAVQKRNKFTIMRSVDRFIRLRRFETMSLHEITQNMKMANISWL 540          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A250WZQ5_9CHLO (Telomerase reverse transcriptase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZQ5_9CHLO)

HSP 1 Score: 59.3 bits (142), Expect = 2.010e-8
Identity = 24/74 (32.43%), Postives = 43/74 (58.11%), Query Frame = 0
Query:    5 PDKSFVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWM 78
            P+   +   + ++ V +F+   C ++ P  L GSK N   L + +  F+GLRRHE +S+ +V  G+R++D  W+
Sbjct:  857 PEDIIMSACSPQQHVTSFLFAVCRKVLPAGLMGSKNNWKQLRRIICLFVGLRRHEQLSLPQVVHGLRSTDMTWL 930          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: D5GMZ3_TUBMM (Telomerase reverse transcriptase n=1 Tax=Tuber melanosporum (strain Mel28) TaxID=656061 RepID=D5GMZ3_TUBMM)

HSP 1 Score: 58.5 bits (140), Expect = 3.660e-8
Identity = 28/73 (38.36%), Postives = 42/73 (57.53%), Query Frame = 0
Query:    3 LDPDKSFVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDF 75
            L P +SF D A+    V+ F       + PT+ WGS+ N     + V+RF+ LRR+E++S+ EV  GM+ S F
Sbjct:  150 LKPKESFTDFASSTGEVSAFARAVILNVVPTEFWGSEENKKGFMRNVDRFVNLRRYETLSLHEVMQGMKASFF 222          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A1S8VGP2_9FUNG (Telomerase reverse transcriptase (Fragment) n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VGP2_9FUNG)

HSP 1 Score: 57.4 bits (137), Expect = 9.260e-8
Identity = 23/70 (32.86%), Postives = 43/70 (61.43%), Query Frame = 0
Query:   10 VDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWMA 79
            +D++ E ++V+ F+      I P DLWG   N  ++   V + + LRR+E++S+Q + TG++ S  +W+A
Sbjct:  451 LDLSIEHQKVSLFIKSVLKHIIPKDLWGDDSNRDVILAVVSQLVSLRRYETLSLQNIITGIKMSKMKWLA 520          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A218Z3Y7_9HELO (Telomerase reverse transcriptase n=1 Tax=Marssonina coronariae TaxID=503106 RepID=A0A218Z3Y7_9HELO)

HSP 1 Score: 57.4 bits (137), Expect = 9.460e-8
Identity = 31/76 (40.79%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    8 SFVDMATERRRVANFMCQACHRIFPTDLWGS----KRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWMA 79
            S ++ AT    V+ F   A  R+ P++ WG+      N     K V+RFIGLRR ES+S+ EVT G++ SD  W+A
Sbjct:  460 SMMNHATPTAMVSAFCRAALSRLIPSEFWGAGATQAHNERTFNKNVDRFIGLRRFESLSLHEVTQGLKISDIPWLA 535          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A8H7XA39_9HELO (Telomerase reverse transcriptase n=1 Tax=Cadophora sp. M221 TaxID=2774352 RepID=A0A8H7XA39_9HELO)

HSP 1 Score: 55.5 bits (132), Expect = 4.490e-7
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0
Query:    8 SFVDMATERRRVANFMCQACHRIFPTDLWGS----KRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWMA 79
            S ++ AT    V+ F      R+ P++ WGS    K+N     + +E+FI LRR ESMS+ +VT G++ +D  W+A
Sbjct:  451 SMMNHATPNANVSAFCRAVLSRLIPSEFWGSGEIQKQNEKTFHQNIEKFIELRRFESMSLHQVTQGLKITDIEWLA 526          
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Match: A0A8H4N3V9_9PEZI (Telomerase reverse transcriptase n=1 Tax=Botryosphaeria dothidea TaxID=55169 RepID=A0A8H4N3V9_9PEZI)

HSP 1 Score: 54.3 bits (129), Expect = 1.150e-6
Identity = 25/74 (33.78%), Postives = 42/74 (56.76%), Query Frame = 0
Query:    9 FVDMATERRRVANFMCQACHRIFPTDLWGS----KRNMVLLAKAVERFIGLRRHESMSVQEVTTGMRTSDFRWM 78
            F D+AT   +V+ F     +++ P DLWG       N  +  + ++RFI LRR ES+++ EV   M+ +D +W+
Sbjct:  481 FTDLATPNHQVSAFCRAVMNKVIPNDLWGEGETQTHNKHIFLRQIDRFICLRRFESLTLHEVLQDMKIADVKWL 554          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig52612.12567.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4G7_ECTSI9.480e-3166.25Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
D7G237_ECTSI2.530e-2364.62Telomerase reverse transcriptase n=1 Tax=Ectocarpu... [more]
L8GIB5_ACACA4.110e-938.57Telomerase reverse transcriptase n=1 Tax=Acanthamo... [more]
A0A1L7SGC1_FUSMA1.060e-838.16Telomerase reverse transcriptase n=2 Tax=Fusarium ... [more]
A0A250WZQ5_9CHLO2.010e-832.43Telomerase reverse transcriptase n=1 Tax=Chlamydom... [more]
D5GMZ3_TUBMM3.660e-838.36Telomerase reverse transcriptase n=1 Tax=Tuber mel... [more]
A0A1S8VGP2_9FUNG9.260e-832.86Telomerase reverse transcriptase (Fragment) n=1 Ta... [more]
A0A218Z3Y7_9HELO9.460e-840.79Telomerase reverse transcriptase n=1 Tax=Marssonin... [more]
A0A8H7XA39_9HELO4.490e-736.84Telomerase reverse transcriptase n=1 Tax=Cadophora... [more]
A0A8H4N3V9_9PEZI1.150e-633.78Telomerase reverse transcriptase n=1 Tax=Botryosph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.132.70coord: 3..80
e-value: 5.6E-20
score: 73.9
IPR021891Telomerase ribonucleoprotein complex - RNA-binding domainPFAMPF12009Telomerase_RBDcoord: 19..79
e-value: 6.4E-16
score: 58.7
IPR003545Telomerase reverse transcriptasePANTHERPTHR12066TELOMERASE REVERSE TRANSCRIPTASEcoord: 8..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig52612contigH-elongata_contig52612:973..1531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig52612.12567.1mRNA_H-elongata_contig52612.12567.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig52612 973..1531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig52612.12567.1 ID=prot_H-elongata_contig52612.12567.1|Name=mRNA_H-elongata_contig52612.12567.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=80bp
FGLDPDKSFVDMATERRRVANFMCQACHRIFPTDLWGSKRNMVLLAKAVE
RFIGLRRHESMSVQEVTTGMRTSDFRWMAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021891Telomerase_RBD
IPR003545Telomerase_RT